Strain Fitness in Pseudomonas sp. RS175 around PFR28_03423

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
3,929,369	+		PFR28_03422	0.78	-0.3
3,929,370	-		PFR28_03422	0.79	+0.3
3,929,370	-		PFR28_03422	0.79	+1.2
3,929,449	+				-0.8
3,929,449	+				-0.3
3,929,449	+				-0.9
3,929,466	+				+0.6
3,929,467	-				-1.3
3,929,525	+				-0.1
3,929,525	+				-0.7
3,929,525	+				-0.2
3,929,525	+				-1.4
3,929,526	-				+0.6
3,929,526	-				-0.1
3,929,526	-				-0.7
3,929,526	-				-0.8
3,929,538	+				-0.2
3,929,538	+				-0.5
3,929,538	+				+0.0
3,929,538	+				+0.2
3,929,539	-				-2.1
3,929,539	-				+1.8
3,929,576	+				+0.5
3,929,576	+				+0.3
3,929,576	+				-0.1
3,929,576	+				-0.5
3,929,576	+				-0.2
3,929,576	+				+0.2
3,929,576	+				-0.5
3,929,576	+				-0.6
3,929,576	+				-0.1
3,929,576	+				+1.1
3,929,576	+				-0.0
3,929,576	+				+0.9
3,929,576	+				+0.4
3,929,576	+				+0.3
3,929,577	-				-0.4
3,929,577	-				+0.7
3,929,577	-				-1.4
3,929,577	-				+0.1
3,929,577	-				-0.1
3,929,577	-				+2.2
3,929,577	-				-1.0
3,929,577	-				+0.4
3,929,577	-				-0.7
3,929,577	-				+1.6
3,929,577	-				+1.8
3,929,577	-				-0.6
3,929,694	-				-1.1
3,929,751	+				+0.7
3,929,766	+				-0.4
3,929,766	+				+0.6
3,929,766	+				-0.8
3,929,767	-				-0.5
3,929,767	-				+0.6
3,929,767	-				+1.2
3,929,767	-				+1.8
3,929,767	-				+0.7
3,929,767	-				+1.2
3,929,870	+				+0.1
3,929,874	+				-0.4
3,930,030	+				-0.0
3,930,030	+				-0.4
3,930,031	-				-0.4
3,930,032	+				-1.0
3,930,032	+				+0.1
3,930,032	+				+0.2
3,930,032	+				-1.8
3,930,032	+				+0.4
3,930,033	-				+1.6
3,930,033	-				-0.4
3,930,033	-				+0.5
3,930,036	+				-0.1
3,930,036	+				+1.1
3,930,036	+				-0.1
3,930,036	+				-0.1
3,930,037	-				-1.0
3,930,037	-				-0.4
3,930,075	+				+0.4
3,930,075	+				-0.2
3,930,078	+				+0.1
3,930,078	+				-1.0
3,930,078	+				+0.9
3,930,078	+				-0.4
3,930,079	-				+0.2
3,930,079	-				+1.2
3,930,079	-				+1.9
3,930,090	+				-0.6
3,930,091	-				-0.4
3,930,111	-				-1.0
3,930,220	+				-0.2
3,930,243	+				-1.3
3,930,244	-				+0.2
3,930,245	+				-0.1
3,930,245	+				+0.3
3,930,245	+				+0.2
3,930,245	+				-0.4
3,930,246	-				-1.2
3,930,246	-				-0.4
3,930,246	-				+0.6
3,930,246	-				-0.1
3,930,307	+				+0.2
3,930,307	+				+1.4
3,930,307	+				-0.2
3,930,307	+				+0.0
3,930,308	-				+0.6
3,930,316	-				+1.2
3,930,316	-				-0.8
3,930,392	-				+0.9
3,930,420	+				+0.5
3,930,420	+				-1.6
3,930,421	-				+2.2
3,930,471	+		PFR28_03423	0.10	+0.6
3,930,485	+		PFR28_03423	0.11	-0.4
3,930,485	+		PFR28_03423	0.11	-0.4
3,930,485	+		PFR28_03423	0.11	-0.2
3,930,485	+		PFR28_03423	0.11	-0.8
3,930,486	-		PFR28_03423	0.11	-0.8
3,930,486	-		PFR28_03423	0.11	+0.2
3,930,486	-		PFR28_03423	0.11	+1.2
3,930,489	-		PFR28_03423	0.11	-2.1
3,930,489	-		PFR28_03423	0.11	-1.1
3,930,544	+		PFR28_03423	0.16	+1.2
3,930,544	+		PFR28_03423	0.16	+0.9
3,930,545	-		PFR28_03423	0.16	-1.8
3,930,545	-		PFR28_03423	0.16	+1.2
3,930,570	-		PFR28_03423	0.17	+2.2
3,930,570	-		PFR28_03423	0.17	+1.2
3,930,580	+		PFR28_03423	0.18	-0.1
3,930,580	+		PFR28_03423	0.18	-1.6
3,930,580	+		PFR28_03423	0.18	+1.8
3,930,581	-		PFR28_03423	0.18	-0.4
3,930,585	+		PFR28_03423	0.19	-0.4
3,930,585	+		PFR28_03423	0.19	+0.6
3,930,585	+		PFR28_03423	0.19	-1.6
3,930,585	+		PFR28_03423	0.19	+0.2
3,930,585	+		PFR28_03423	0.19	-0.4
3,930,585	+		PFR28_03423	0.19	-1.1
3,930,585	+		PFR28_03423	0.19	+0.4
3,930,585	+		PFR28_03423	0.19	+0.6
3,930,586	-		PFR28_03423	0.19	+0.2
3,930,586	-		PFR28_03423	0.19	+0.2
3,930,586	-		PFR28_03423	0.19	-0.4
3,930,586	-		PFR28_03423	0.19	-1.1
3,930,586	-		PFR28_03423	0.19	+1.2
3,930,586	-		PFR28_03423	0.19	-1.4
3,930,586	-		PFR28_03423	0.19	+0.2
3,930,586	-		PFR28_03423	0.19	-2.1
3,930,703	+		PFR28_03423	0.27	+0.6
3,930,939	-		PFR28_03423	0.45	+2.0
3,930,969	-		PFR28_03423	0.47	-0.6
3,930,969	-		PFR28_03423	0.47	+1.2
3,930,983	+		PFR28_03423	0.49	-1.1
3,930,984	-		PFR28_03423	0.49	+1.2
3,930,984	-		PFR28_03423	0.49	-0.4
3,931,017	-		PFR28_03423	0.51	-1.1
3,931,049	+		PFR28_03423	0.53	-0.8
3,931,052	+		PFR28_03423	0.54	+0.2
3,931,052	+		PFR28_03423	0.54	-1.8
3,931,052	+		PFR28_03423	0.54	+0.6
3,931,052	+		PFR28_03423	0.54	+0.2
3,931,052	+		PFR28_03423	0.54	+0.5
3,931,053	-		PFR28_03423	0.54	-1.6
3,931,053	-		PFR28_03423	0.54	-0.4
3,931,053	-		PFR28_03423	0.54	+1.2
3,931,058	-		PFR28_03423	0.54	-0.8
3,931,068	-		PFR28_03423	0.55	+1.8
3,931,068	-		PFR28_03423	0.55	+1.2
3,931,068	-		PFR28_03423	0.55	-0.4
3,931,112	-		PFR28_03423	0.58	-0.4
3,931,118	+		PFR28_03423	0.59	+0.2
3,931,119	-		PFR28_03423	0.59	+1.2
3,931,119	-		PFR28_03423	0.59	-0.8
3,931,119	-		PFR28_03423	0.59	+0.2
3,931,259	+		PFR28_03423	0.69	-1.2
3,931,260	-		PFR28_03423	0.69	-0.8
3,931,389	-		PFR28_03423	0.79	+1.2
3,931,422	-		PFR28_03423	0.82	+1.2
3,931,484	+		PFR28_03423	0.86	-1.1
3,931,484	+		PFR28_03423	0.86	-1.1
3,931,485	-		PFR28_03423	0.86	-0.8
3,931,529	+		PFR28_03423	0.90	+0.2
3,931,530	-		PFR28_03423	0.90	-0.4
3,931,530	-		PFR28_03423	0.90	-1.1
3,931,530	-		PFR28_03423	0.90	+1.0
3,931,530	-		PFR28_03423	0.90	+1.2
3,931,530	-		PFR28_03423	0.90	+1.2
3,931,530	-		PFR28_03423	0.90	-0.0
3,931,530	-		PFR28_03423	0.90	+1.2
3,931,530	-		PFR28_03423	0.90	+0.6
3,931,530	-		PFR28_03423	0.90	+0.9
3,931,530	-		PFR28_03423	0.90	-1.4
3,931,530	-		PFR28_03423	0.90	+0.2
3,931,664	+				+0.6
3,931,664	+				-0.4
3,931,664	+				-1.1
3,931,664	+				+0.2
3,931,664	+				+1.8
3,931,664	+				+1.8
3,931,665	-				+0.2
3,931,665	-				-1.1
3,931,727	-				+1.8
3,931,733	+				-0.1
3,931,733	+				-0.8
3,931,733	+				-0.3
3,931,733	+				+0.6
3,931,733	+				+0.0
3,931,733	+				-1.1
3,931,733	+				-0.3
3,931,733	+				+1.2
3,931,733	+				-0.8
3,931,733	+				-0.4
3,931,734	-				+0.6
3,931,734	-				-0.6
3,931,734	-				-1.0
3,931,734	-				-0.8
3,931,734	-				+0.5
3,931,734	-				-0.8
3,931,734	-				+0.4
3,931,734	-				-0.3
3,931,734	-				-1.2
3,931,735	+				-0.4
3,931,735	+				+0.7
3,931,736	-				-0.5
3,931,736	-				+1.0
3,931,736	-				+0.6
3,931,736	-				-1.5
3,931,736	-				-0.1
3,931,748	+				-0.1
3,931,748	+				+0.0
3,931,749	-				+0.6
3,931,749	-				-0.3
3,931,749	-				+0.5
3,931,792	+				+0.5
3,931,792	+				+0.5
3,931,792	+				+1.2
3,931,792	+				-0.2
3,931,792	+				-0.4
3,931,793	-				-0.4
3,931,808	+				-1.4
3,931,808	+				-0.1
3,932,079	-		PFR28_03424	0.32	+0.6
3,932,079	-		PFR28_03424	0.32	-0.4
3,932,127	+		PFR28_03424	0.38	+0.3
3,932,190	+		PFR28_03424	0.45	+1.2
3,932,422	+		PFR28_03424	0.73	+0.4
3,932,423	-		PFR28_03424	0.73	-0.3
3,932,423	-		PFR28_03424	0.73	-0.5
3,932,423	-		PFR28_03424	0.73	-0.1
3,932,449	-		PFR28_03424	0.76	-0.1
3,932,481	+		PFR28_03424	0.80	+0.3
3,932,481	+		PFR28_03424	0.80	-0.8
3,932,579	+				-0.4