Experiment: D-Glucose (C) 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFR28_03265 and PFR28_03266 are separated by 529 nucleotides PFR28_03266 and PFR28_03267 are separated by 184 nucleotides
PFR28_03265: PFR28_03265 - tRNA-Arg, at 3,775,789 to 3,775,865
_03265
PFR28_03266: PFR28_03266 - hypothetical protein, at 3,776,395 to 3,776,721
_03266
PFR28_03267: PFR28_03267 - Magnesium transporter MgtE, at 3,776,906 to 3,778,348
_03267
Position (kb)
3776
3777 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3775.642 kb on + strand at 3775.642 kb on + strand at 3775.642 kb on + strand at 3775.643 kb on - strand at 3775.643 kb on - strand at 3775.643 kb on - strand at 3775.643 kb on - strand at 3775.644 kb on + strand at 3775.644 kb on + strand at 3775.644 kb on + strand at 3775.645 kb on - strand at 3775.645 kb on - strand at 3775.659 kb on + strand at 3775.660 kb on - strand at 3775.660 kb on - strand at 3775.728 kb on + strand at 3775.728 kb on + strand at 3775.729 kb on - strand at 3775.729 kb on - strand at 3775.729 kb on - strand at 3775.744 kb on + strand at 3775.745 kb on - strand at 3775.745 kb on - strand at 3775.745 kb on - strand at 3775.783 kb on + strand at 3775.783 kb on + strand at 3775.784 kb on - strand at 3775.784 kb on - strand at 3775.784 kb on - strand at 3775.784 kb on - strand at 3775.784 kb on - strand at 3775.784 kb on - strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.785 kb on + strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.786 kb on - strand at 3775.880 kb on - strand at 3775.912 kb on - strand at 3775.944 kb on + strand at 3775.944 kb on + strand at 3775.945 kb on - strand at 3775.952 kb on + strand at 3775.952 kb on + strand at 3775.952 kb on + strand at 3775.958 kb on + strand at 3775.958 kb on + strand at 3775.958 kb on + strand at 3775.959 kb on - strand at 3775.959 kb on - strand at 3775.966 kb on + strand at 3775.967 kb on - strand at 3776.048 kb on - strand at 3776.071 kb on + strand at 3776.071 kb on + strand at 3776.071 kb on + strand at 3776.072 kb on - strand at 3776.072 kb on - strand at 3776.072 kb on - strand at 3776.072 kb on - strand at 3776.072 kb on - strand at 3776.072 kb on - strand at 3776.073 kb on + strand at 3776.078 kb on + strand at 3776.078 kb on + strand at 3776.078 kb on + strand at 3776.078 kb on + strand at 3776.078 kb on + strand at 3776.079 kb on - strand at 3776.079 kb on - strand at 3776.079 kb on - strand at 3776.146 kb on + strand at 3776.298 kb on + strand at 3776.337 kb on + strand at 3776.338 kb on - strand at 3776.393 kb on - strand at 3776.393 kb on - strand at 3776.393 kb on - strand at 3776.394 kb on + strand at 3776.395 kb on - strand at 3776.419 kb on + strand at 3776.419 kb on + strand at 3776.450 kb on + strand, within PFR28_03266 at 3776.450 kb on + strand, within PFR28_03266 at 3776.450 kb on + strand, within PFR28_03266 at 3776.450 kb on + strand, within PFR28_03266 at 3776.451 kb on - strand, within PFR28_03266 at 3776.451 kb on - strand, within PFR28_03266 at 3776.451 kb on - strand, within PFR28_03266 at 3776.826 kb on + strand at 3776.826 kb on + strand at 3776.826 kb on + strand at 3776.827 kb on - strand at 3776.827 kb on - strand at 3776.827 kb on - strand at 3776.839 kb on + strand at 3776.839 kb on + strand at 3776.839 kb on + strand at 3776.839 kb on + strand at 3776.840 kb on - strand at 3776.840 kb on - strand at 3776.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) 10 mM remove 3,775,642 + -0.1 3,775,642 + -0.6 3,775,642 + -0.1 3,775,643 - -0.0 3,775,643 - +0.2 3,775,643 - -0.5 3,775,643 - +1.2 3,775,644 + -1.3 3,775,644 + +0.5 3,775,644 + -1.5 3,775,645 - -0.3 3,775,645 - +0.1 3,775,659 + +0.6 3,775,660 - +0.1 3,775,660 - +0.4 3,775,728 + -0.4 3,775,728 + -0.1 3,775,729 - -0.0 3,775,729 - +2.8 3,775,729 - -0.5 3,775,744 + -1.4 3,775,745 - -0.1 3,775,745 - -1.0 3,775,745 - -0.6 3,775,783 + -0.2 3,775,783 + -0.1 3,775,784 - +0.2 3,775,784 - +0.2 3,775,784 - -0.1 3,775,784 - -1.6 3,775,784 - -1.6 3,775,784 - -0.1 3,775,785 + +0.4 3,775,785 + -0.5 3,775,785 + -1.6 3,775,785 + -0.5 3,775,785 + -0.0 3,775,785 + -0.1 3,775,785 + -0.0 3,775,785 + -0.7 3,775,785 + +0.0 3,775,785 + +0.6 3,775,785 + -0.9 3,775,785 + +0.4 3,775,785 + +0.2 3,775,785 + +0.9 3,775,786 - +0.8 3,775,786 - +1.7 3,775,786 - +0.2 3,775,786 - -0.5 3,775,786 - -0.3 3,775,786 - +0.3 3,775,786 - -0.4 3,775,786 - +0.1 3,775,786 - +0.4 3,775,786 - -0.7 3,775,786 - +0.3 3,775,786 - -0.8 3,775,786 - +1.2 3,775,786 - -0.5 3,775,786 - +0.6 3,775,786 - -0.3 3,775,786 - +0.7 3,775,880 - -0.6 3,775,912 - -0.2 3,775,944 + +0.8 3,775,944 + +0.6 3,775,945 - +0.5 3,775,952 + +0.3 3,775,952 + -0.3 3,775,952 + +0.1 3,775,958 + -0.1 3,775,958 + -0.6 3,775,958 + -0.1 3,775,959 - -0.2 3,775,959 - -1.0 3,775,966 + +0.0 3,775,967 - -0.1 3,776,048 - -0.5 3,776,071 + +1.2 3,776,071 + +1.2 3,776,071 + +0.9 3,776,072 - +0.2 3,776,072 - +0.1 3,776,072 - -0.4 3,776,072 - +0.0 3,776,072 - +0.3 3,776,072 - +0.6 3,776,073 + -0.4 3,776,078 + +0.4 3,776,078 + -0.7 3,776,078 + -0.3 3,776,078 + +0.0 3,776,078 + +1.2 3,776,079 - -1.0 3,776,079 - +0.2 3,776,079 - +0.0 3,776,146 + +0.4 3,776,298 + +1.6 3,776,337 + +0.4 3,776,338 - -1.0 3,776,393 - -0.4 3,776,393 - -0.5 3,776,393 - -1.2 3,776,394 + -0.4 3,776,395 - -0.9 3,776,419 + -0.9 3,776,419 + -1.2 3,776,450 + PFR28_03266 0.17 -0.1 3,776,450 + PFR28_03266 0.17 -1.5 3,776,450 + PFR28_03266 0.17 -0.8 3,776,450 + PFR28_03266 0.17 -1.4 3,776,451 - PFR28_03266 0.17 -1.4 3,776,451 - PFR28_03266 0.17 -0.8 3,776,451 - PFR28_03266 0.17 +0.2 3,776,826 + -0.5 3,776,826 + +0.7 3,776,826 + +0.1 3,776,827 - +0.4 3,776,827 - +0.2 3,776,827 - -0.9 3,776,839 + +0.0 3,776,839 + -0.7 3,776,839 + +0.1 3,776,839 + -1.5 3,776,840 - +0.5 3,776,840 - +0.5 3,776,840 - -0.0
Or see this region's nucleotide sequence