Strain Fitness in Pseudomonas sp. RS175 around PFR28_03223

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
3,728,944	+				+0.7
3,728,944	+				-0.1
3,728,944	+				-0.4
3,728,945	-				+0.8
3,728,945	-				-1.8
3,728,952	+				+0.7
3,728,952	+				-0.6
3,728,952	+				+0.3
3,728,953	-				+0.4
3,728,953	-				-0.0
3,729,030	+				+1.6
3,729,030	+				+1.0
3,729,030	+				+0.2
3,729,030	+				+0.1
3,729,031	-				+1.2
3,729,465	+		PFR28_03222	0.60	-0.6
3,729,465	+		PFR28_03222	0.60	+0.2
3,729,466	-		PFR28_03222	0.60	+0.2
3,729,466	-		PFR28_03222	0.60	-0.1
3,729,466	-		PFR28_03222	0.60	+0.4
3,729,466	-		PFR28_03222	0.60	-0.1
3,729,482	-		PFR28_03222	0.62	+0.0
3,729,501	+		PFR28_03222	0.64	+0.8
3,729,502	-		PFR28_03222	0.65	-0.0
3,729,502	-		PFR28_03222	0.65	-0.3
3,729,502	-		PFR28_03222	0.65	-0.2
3,729,502	-		PFR28_03222	0.65	-0.0
3,729,502	-		PFR28_03222	0.65	+0.2
3,729,502	-		PFR28_03222	0.65	+0.4
3,729,592	+		PFR28_03222	0.75	+0.0
3,729,592	+		PFR28_03222	0.75	+0.1
3,729,592	+		PFR28_03222	0.75	-1.6
3,729,592	+		PFR28_03222	0.75	-1.4
3,729,592	+		PFR28_03222	0.75	+0.4
3,729,593	-		PFR28_03222	0.75	-0.4
3,729,593	-		PFR28_03222	0.75	+0.5
3,729,593	-		PFR28_03222	0.75	-0.2
3,729,593	-		PFR28_03222	0.75	-0.2
3,729,593	-		PFR28_03222	0.75	+0.1
3,729,593	-		PFR28_03222	0.75	-0.5
3,729,595	+		PFR28_03222	0.76	-0.7
3,729,595	+		PFR28_03222	0.76	+0.1
3,729,595	+		PFR28_03222	0.76	-0.4
3,729,595	+		PFR28_03222	0.76	-0.8
3,729,595	+		PFR28_03222	0.76	+0.1
3,729,595	+		PFR28_03222	0.76	-0.2
3,729,595	+		PFR28_03222	0.76	-0.9
3,729,595	+		PFR28_03222	0.76	+0.2
3,729,595	+		PFR28_03222	0.76	+0.2
3,729,595	+		PFR28_03222	0.76	+0.5
3,729,595	+		PFR28_03222	0.76	+0.9
3,729,595	+		PFR28_03222	0.76	+0.7
3,729,595	+		PFR28_03222	0.76	+0.6
3,729,596	-		PFR28_03222	0.76	-0.7
3,729,596	-		PFR28_03222	0.76	-0.3
3,729,596	-		PFR28_03222	0.76	+0.4
3,729,596	-		PFR28_03222	0.76	+0.3
3,729,596	-		PFR28_03222	0.76	+0.2
3,729,596	-		PFR28_03222	0.76	-0.6
3,729,596	-		PFR28_03222	0.76	+0.1
3,729,596	-		PFR28_03222	0.76	-0.1
3,729,676	+		PFR28_03222	0.85	+0.2
3,729,676	+		PFR28_03222	0.85	+0.1
3,729,677	-		PFR28_03222	0.85	-1.8
3,729,712	+		PFR28_03222	0.90	+0.5
3,729,712	+		PFR28_03222	0.90	+0.1
3,729,712	+		PFR28_03222	0.90	+0.5
3,729,713	-		PFR28_03222	0.90	-0.3
3,729,713	-		PFR28_03222	0.90	-0.7
3,729,743	-				-0.1
3,729,793	+				-1.0
3,729,793	+				+0.1
3,729,793	+				+0.0
3,729,793	+				-1.2
3,729,794	-				+1.2
3,729,794	-				+0.4
3,729,794	-				-0.3
3,729,794	-				-0.7
3,729,935	-				+0.6
3,729,935	-				-1.8
3,730,079	+				-1.9
3,730,079	+				+0.1
3,730,229	+		PFR28_03223	0.16	+0.2
3,730,229	+		PFR28_03223	0.16	-1.4
3,730,230	-		PFR28_03223	0.16	-0.6
3,730,230	-		PFR28_03223	0.16	-1.5
3,730,632	+		PFR28_03223	0.34	-1.8
3,730,632	+		PFR28_03223	0.34	-0.1
3,730,632	+		PFR28_03223	0.34	-2.3
3,730,633	-		PFR28_03223	0.34	-0.8
3,730,633	-		PFR28_03223	0.34	-0.8
3,730,633	-		PFR28_03223	0.34	-3.7
3,730,634	+		PFR28_03223	0.34	-1.4
3,730,634	+		PFR28_03223	0.34	-0.1
3,730,634	+		PFR28_03223	0.34	-2.1
3,730,634	+		PFR28_03223	0.34	-0.9
3,730,634	+		PFR28_03223	0.34	-1.1
3,730,635	-		PFR28_03223	0.34	-1.6
3,730,721	+		PFR28_03223	0.38	-1.6
3,730,722	-		PFR28_03223	0.38	+1.2
3,730,722	-		PFR28_03223	0.38	+0.5
3,730,722	-		PFR28_03223	0.38	-0.4
3,730,722	-		PFR28_03223	0.38	+0.2
3,730,732	+		PFR28_03223	0.39	-1.4
3,730,767	+		PFR28_03223	0.40	-0.8
3,730,767	+		PFR28_03223	0.40	-0.4
3,730,767	+		PFR28_03223	0.40	-1.5
3,730,767	+		PFR28_03223	0.40	-1.6
3,730,768	-		PFR28_03223	0.40	-1.6
3,730,768	-		PFR28_03223	0.40	-0.9
3,730,768	-		PFR28_03223	0.40	-2.1
3,730,860	-		PFR28_03223	0.44	-0.4
3,730,971	-		PFR28_03223	0.49	-0.7
3,731,006	+		PFR28_03223	0.51	-0.4
3,731,006	+		PFR28_03223	0.51	+1.8
3,731,006	+		PFR28_03223	0.51	-1.8
3,731,007	-		PFR28_03223	0.51	-2.6
3,731,077	+		PFR28_03223	0.54	-1.8
3,731,078	-		PFR28_03223	0.54	-1.6
3,731,078	-		PFR28_03223	0.54	-1.1
3,731,147	+		PFR28_03223	0.57	-1.1
3,731,147	+		PFR28_03223	0.57	-1.1
3,731,147	+		PFR28_03223	0.57	-0.4
3,731,147	+		PFR28_03223	0.57	-1.4
3,731,148	-		PFR28_03223	0.57	-1.1
3,731,148	-		PFR28_03223	0.57	-2.3
3,731,148	-		PFR28_03223	0.57	-0.8
3,731,184	+		PFR28_03223	0.59	-0.8
3,731,208	-		PFR28_03223	0.60	-1.6
3,731,256	-		PFR28_03223	0.62	-0.4
3,731,306	+		PFR28_03223	0.64	+0.2
3,731,306	+		PFR28_03223	0.64	-1.1
3,731,306	+		PFR28_03223	0.64	-0.4
3,731,306	+		PFR28_03223	0.64	+0.2
3,731,307	-		PFR28_03223	0.64	-1.6
3,731,444	+		PFR28_03223	0.70	+0.2
3,731,444	+		PFR28_03223	0.70	-1.1
3,731,444	+		PFR28_03223	0.70	+1.2
3,731,444	+		PFR28_03223	0.70	-0.4
3,731,444	+		PFR28_03223	0.70	-2.4
3,731,445	-		PFR28_03223	0.70	-0.4
3,731,445	-		PFR28_03223	0.70	-0.4
3,731,445	-		PFR28_03223	0.70	+0.2
3,731,445	-		PFR28_03223	0.70	-0.4
3,731,445	-		PFR28_03223	0.70	-0.4
3,731,445	-		PFR28_03223	0.70	-1.6
3,731,445	-		PFR28_03223	0.70	+0.2
3,731,531	+		PFR28_03223	0.74	-0.6
3,731,531	+		PFR28_03223	0.74	+0.8
3,731,531	+		PFR28_03223	0.74	-1.3
3,731,531	+		PFR28_03223	0.74	-1.8
3,731,531	+		PFR28_03223	0.74	+1.2
3,731,531	+		PFR28_03223	0.74	-1.4
3,731,531	+		PFR28_03223	0.74	-2.1
3,731,531	+		PFR28_03223	0.74	-1.0
3,731,531	+		PFR28_03223	0.74	-0.8
3,731,531	+		PFR28_03223	0.74	-1.8
3,731,531	+		PFR28_03223	0.74	+0.6
3,731,531	+		PFR28_03223	0.74	+1.2
3,731,531	+		PFR28_03223	0.74	-0.8
3,731,531	+		PFR28_03223	0.74	-0.4
3,731,531	+		PFR28_03223	0.74	-1.1
3,731,531	+		PFR28_03223	0.74	+0.2
3,731,531	+		PFR28_03223	0.74	+1.2
3,731,531	+		PFR28_03223	0.74	-0.8
3,731,531	+		PFR28_03223	0.74	-0.8
3,731,531	+		PFR28_03223	0.74	-3.0
3,731,531	+		PFR28_03223	0.74	-0.4
3,731,531	+		PFR28_03223	0.74	-2.0
3,731,531	+		PFR28_03223	0.74	+0.2
3,731,531	+		PFR28_03223	0.74	-1.1
3,731,531	+		PFR28_03223	0.74	-1.8
3,731,532	-		PFR28_03223	0.74	-0.1
3,731,532	-		PFR28_03223	0.74	-2.4
3,731,532	-		PFR28_03223	0.74	+0.2
3,731,532	-		PFR28_03223	0.74	+1.2
3,731,532	-		PFR28_03223	0.74	+2.2
3,731,532	-		PFR28_03223	0.74	-2.0
3,731,532	-		PFR28_03223	0.74	-1.4
3,731,532	-		PFR28_03223	0.74	-0.4
3,731,532	-		PFR28_03223	0.74	+0.2
3,731,532	-		PFR28_03223	0.74	-0.4
3,731,532	-		PFR28_03223	0.74	+1.2
3,731,532	-		PFR28_03223	0.74	-1.6
3,731,532	-		PFR28_03223	0.74	+0.2
3,731,532	-		PFR28_03223	0.74	-0.3
3,731,532	-		PFR28_03223	0.74	-0.4
3,731,532	-		PFR28_03223	0.74	+0.2
3,731,532	-		PFR28_03223	0.74	-1.2
3,731,532	-		PFR28_03223	0.74	-1.6
3,731,532	-		PFR28_03223	0.74	+1.2
3,731,532	-		PFR28_03223	0.74	+0.2
3,732,063	+				-0.4
3,732,063	+				-1.8
3,732,064	-				-2.0
3,732,103	+				-2.1
3,732,103	+				+0.2
3,732,103	+				-1.1
3,732,104	-				-2.3
3,732,104	-				+0.5
3,732,104	-				-1.1
3,732,104	-				-1.4
3,732,104	-				-0.8
3,732,112	+				-1.1
3,732,112	+				+0.3
3,732,112	+				-0.4
3,732,112	+				-1.4
3,732,112	+				-1.8
3,732,112	+				-1.4
3,732,112	+				-0.4
3,732,113	-				-0.1
3,732,113	-				+0.5
3,732,113	-				-1.4
3,732,113	-				-2.3
3,732,113	-				-0.3
3,732,113	-				-1.6
3,732,113	-				-0.4
3,732,113	-				-0.0
3,732,113	-				-1.0
3,732,116	+				-1.4
3,732,116	+				+1.2
3,732,116	+				-0.8
3,732,117	-				-3.2
3,732,117	-				-0.5
3,732,117	-				-0.8
3,732,117	-				+0.5
3,732,117	-				-1.8
3,732,125	+				-0.2
3,732,125	+				-1.0
3,732,125	+				+0.4
3,732,126	-				-0.3
3,732,126	-				-2.8
3,732,243	+				-1.0
3,732,281	+				-0.2
3,732,281	+				+3.2
3,732,281	+				-1.2
3,732,282	-				+0.1
3,732,304	-				-0.4
3,732,366	+		PFR28_03224	0.11	+0.2
3,732,366	+		PFR28_03224	0.11	+0.0
3,732,366	+		PFR28_03224	0.11	-1.1
3,732,366	+		PFR28_03224	0.11	-0.4
3,732,366	+		PFR28_03224	0.11	+1.9
3,732,366	+		PFR28_03224	0.11	-0.9
3,732,366	+		PFR28_03224	0.11	+0.7
3,732,366	+		PFR28_03224	0.11	+0.2
3,732,367	-		PFR28_03224	0.11	-0.0
3,732,367	-		PFR28_03224	0.11	-0.1
3,732,367	-		PFR28_03224	0.11	+0.5
3,732,367	-		PFR28_03224	0.11	-0.1
3,732,367	-		PFR28_03224	0.11	-1.7
3,732,367	-		PFR28_03224	0.11	+1.4
3,732,367	-		PFR28_03224	0.11	-1.9
3,732,367	-		PFR28_03224	0.11	+0.5
3,732,367	-		PFR28_03224	0.11	+0.9
3,732,367	-		PFR28_03224	0.11	-0.1
3,732,370	+		PFR28_03224	0.12	-1.4
3,732,370	+		PFR28_03224	0.12	+0.4
3,732,370	+		PFR28_03224	0.12	-0.1
3,732,370	+		PFR28_03224	0.12	+1.1
3,732,370	+		PFR28_03224	0.12	+0.4
3,732,370	+		PFR28_03224	0.12	-0.0
3,732,370	+		PFR28_03224	0.12	+0.9
3,732,370	+		PFR28_03224	0.12	-0.6
3,732,370	+		PFR28_03224	0.12	-0.4
3,732,370	+		PFR28_03224	0.12	+0.1
3,732,370	+		PFR28_03224	0.12	+0.0
3,732,370	+		PFR28_03224	0.12	+0.1
3,732,370	+		PFR28_03224	0.12	+0.8
3,732,370	+		PFR28_03224	0.12	-0.0
3,732,370	+		PFR28_03224	0.12	+0.1
3,732,370	+		PFR28_03224	0.12	+0.2
3,732,370	+		PFR28_03224	0.12	+0.3
3,732,370	+		PFR28_03224	0.12	+0.4
3,732,370	+		PFR28_03224	0.12	-0.1
3,732,370	+		PFR28_03224	0.12	-0.2
3,732,370	+		PFR28_03224	0.12	-1.8
3,732,370	+		PFR28_03224	0.12	-0.4
3,732,370	+		PFR28_03224	0.12	-1.8
3,732,370	+		PFR28_03224	0.12	-0.6
3,732,370	+		PFR28_03224	0.12	-0.3
3,732,370	+		PFR28_03224	0.12	-0.6
3,732,370	+		PFR28_03224	0.12	+0.3
3,732,370	+		PFR28_03224	0.12	-0.4
3,732,370	+		PFR28_03224	0.12	+0.2
3,732,371	-		PFR28_03224	0.12	+1.5
3,732,371	-		PFR28_03224	0.12	-0.4
3,732,371	-		PFR28_03224	0.12	-0.3
3,732,371	-		PFR28_03224	0.12	-0.3
3,732,371	-		PFR28_03224	0.12	-0.0
3,732,371	-		PFR28_03224	0.12	-0.6
3,732,371	-		PFR28_03224	0.12	-0.0
3,732,371	-		PFR28_03224	0.12	+0.4
3,732,371	-		PFR28_03224	0.12	-0.3
3,732,371	-		PFR28_03224	0.12	+1.9
3,732,371	-		PFR28_03224	0.12	-0.7
3,732,371	-		PFR28_03224	0.12	-1.4
3,732,371	-		PFR28_03224	0.12	-1.1
3,732,371	-		PFR28_03224	0.12	+0.2
3,732,371	-		PFR28_03224	0.12	-0.4
3,732,371	-		PFR28_03224	0.12	+0.8
3,732,371	-		PFR28_03224	0.12	-1.7
3,732,371	-		PFR28_03224	0.12	-1.4
3,732,371	-		PFR28_03224	0.12	+0.1
3,732,371	-		PFR28_03224	0.12	-0.7
3,732,371	-		PFR28_03224	0.12	-2.3
3,732,371	-		PFR28_03224	0.12	-0.2
3,732,371	-		PFR28_03224	0.12	-0.4
3,732,371	-		PFR28_03224	0.12	-2.0
3,732,371	-		PFR28_03224	0.12	+1.2
3,732,371	-		PFR28_03224	0.12	-1.4
3,732,371	-		PFR28_03224	0.12	-0.4
3,732,371	-		PFR28_03224	0.12	+0.2
3,732,371	-		PFR28_03224	0.12	-0.4
3,732,371	-		PFR28_03224	0.12	-1.3
3,732,371	-		PFR28_03224	0.12	-1.1
3,732,371	-		PFR28_03224	0.12	-0.6
3,732,371	-		PFR28_03224	0.12	+0.1
3,732,371	-		PFR28_03224	0.12	+1.4
3,732,371	-		PFR28_03224	0.12	+1.2
3,732,371	-		PFR28_03224	0.12	+0.8
3,732,372	+		PFR28_03224	0.12	-1.5
3,732,372	+		PFR28_03224	0.12	-0.5
3,732,372	+		PFR28_03224	0.12	-1.1
3,732,372	+		PFR28_03224	0.12	-0.1
3,732,372	+		PFR28_03224	0.12	-0.3
3,732,372	+		PFR28_03224	0.12	-0.0
3,732,372	+		PFR28_03224	0.12	+0.1
3,732,372	+		PFR28_03224	0.12	+0.4
3,732,372	+		PFR28_03224	0.12	-0.4
3,732,372	+		PFR28_03224	0.12	-0.1
3,732,372	+		PFR28_03224	0.12	-0.1
3,732,373	-		PFR28_03224	0.12	-2.3
3,732,373	-		PFR28_03224	0.12	-1.1
3,732,373	-		PFR28_03224	0.12	-0.8
3,732,373	-		PFR28_03224	0.12	+0.8
3,732,373	-		PFR28_03224	0.12	+1.2
3,732,373	-		PFR28_03224	0.12	-0.5
3,732,373	-		PFR28_03224	0.12	-1.5
3,732,373	-		PFR28_03224	0.12	-0.4
3,732,373	-		PFR28_03224	0.12	+1.0
3,732,373	-		PFR28_03224	0.12	-0.3
3,732,373	-		PFR28_03224	0.12	-0.1
3,732,373	-		PFR28_03224	0.12	-0.4
3,732,373	-		PFR28_03224	0.12	+1.0
3,732,373	-		PFR28_03224	0.12	+0.0
3,732,373	-		PFR28_03224	0.12	-0.6
3,732,373	-		PFR28_03224	0.12	-1.3
3,732,373	-		PFR28_03224	0.12	-2.4
3,732,373	-		PFR28_03224	0.12	-0.1
3,732,373	-		PFR28_03224	0.12	-1.2
3,732,373	-		PFR28_03224	0.12	+0.4
3,732,373	-		PFR28_03224	0.12	-1.4
3,732,373	-		PFR28_03224	0.12	+0.1
3,732,373	-		PFR28_03224	0.12	-1.8
3,732,374	-		PFR28_03224	0.12	-0.4
3,732,448	-		PFR28_03224	0.17	-0.6
3,732,524	+		PFR28_03224	0.23	-0.2
3,732,604	-		PFR28_03224	0.29	-0.2
3,732,755	-		PFR28_03224	0.40	+0.1
3,732,900	+		PFR28_03224	0.50	-0.4
3,732,918	+		PFR28_03224	0.52	-1.7
3,733,032	+		PFR28_03224	0.60	-1.3