Strain Fitness in Pseudomonas sp. RS175 around PFR28_02824

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
3,296,995	+		PFR28_02822	0.71	-0.3
3,296,995	+		PFR28_02822	0.71	-0.2
3,296,995	+		PFR28_02822	0.71	-1.5
3,296,995	+		PFR28_02822	0.71	+0.4
3,296,996	-		PFR28_02822	0.71	-0.9
3,297,002	+		PFR28_02822	0.72	-1.7
3,297,002	+		PFR28_02822	0.72	-1.9
3,297,003	-		PFR28_02822	0.72	+0.0
3,297,003	-		PFR28_02822	0.72	-0.4
3,297,003	-		PFR28_02822	0.72	-0.0
3,297,003	-		PFR28_02822	0.72	+0.0
3,297,110	-		PFR28_02822	0.86	-0.2
3,297,156	-				-1.0
3,297,156	-				+0.5
3,297,187	+				-0.8
3,297,187	+				+0.7
3,297,188	-				+0.2
3,297,188	-				-0.7
3,297,227	+				-1.8
3,297,227	+				-1.3
3,297,227	+				-0.9
3,297,228	-				-0.5
3,297,228	-				-0.2
3,297,288	+				-0.0
3,297,288	+				+0.5
3,297,288	+				-0.6
3,297,289	-				+0.6
3,297,289	-				+0.7
3,297,289	-				+1.2
3,297,289	-				-0.8
3,297,289	-				+0.1
3,297,610	+		PFR28_02823	0.48	-2.7
3,297,611	-		PFR28_02823	0.48	-1.8
3,297,611	-		PFR28_02823	0.48	-3.8
3,298,066	+				-4.9
3,298,066	+				-2.8
3,298,386	+		PFR28_02824	0.30	-2.5
3,298,386	+		PFR28_02824	0.30	-3.7
3,298,386	+		PFR28_02824	0.30	-3.5
3,298,386	+		PFR28_02824	0.30	-2.5
3,298,386	+		PFR28_02824	0.30	+0.2
3,298,386	+		PFR28_02824	0.30	-1.4
3,298,387	-		PFR28_02824	0.30	-4.6
3,298,387	-		PFR28_02824	0.30	-4.8
3,298,387	-		PFR28_02824	0.30	-3.1
3,298,387	-		PFR28_02824	0.30	-3.5
3,298,636	-		PFR28_02824	0.48	-5.5
3,299,082	+		PFR28_02824	0.79	+0.2
3,299,082	+		PFR28_02824	0.79	-2.7
3,299,083	-		PFR28_02824	0.79	-4.0
3,299,293	+				-2.7
3,299,294	-				-3.9
3,299,294	-				-4.1
3,299,294	-				-1.2
3,299,295	+				-2.0
3,299,295	+				-3.5
3,299,295	+				-0.8
3,299,295	+				-2.5
3,299,295	+				-1.0
3,299,295	+				-2.0
3,299,295	+				-2.2
3,299,295	+				-1.8
3,299,296	-				-2.3
3,299,296	-				-2.4
3,299,296	-				-1.8
3,299,296	-				-4.8
3,299,296	-				-3.4
3,299,296	-				-3.2
3,299,296	-				-4.4
3,299,296	-				-3.8
3,299,296	-				-3.1
3,299,403	-				+0.1
3,299,403	-				+0.4
3,299,403	-				+0.4
3,299,403	-				-1.1
3,299,456	+				-2.7
3,299,456	+				-1.4
3,299,456	+				-1.5
3,299,457	-				-2.3
3,299,464	+				-2.5
3,299,464	+				-1.8
3,299,464	+				-0.8
3,299,465	-				-0.7
3,299,469	+				-2.4
3,299,470	-				-1.3
3,299,559	+				+0.6
3,299,559	+				-0.8
3,299,666	+		PFR28_02825	0.15	-0.2
3,299,667	-		PFR28_02825	0.15	+0.3
3,299,667	-		PFR28_02825	0.15	+0.2
3,299,667	-		PFR28_02825	0.15	+0.7
3,299,696	+		PFR28_02825	0.18	+0.1
3,299,696	+		PFR28_02825	0.18	+1.9
3,299,697	-		PFR28_02825	0.18	+0.6
3,299,697	-		PFR28_02825	0.18	-0.5
3,299,697	-		PFR28_02825	0.18	+1.3
3,299,697	-		PFR28_02825	0.18	+0.6
3,299,697	-		PFR28_02825	0.18	-0.3
3,299,697	-		PFR28_02825	0.18	-0.0
3,299,737	+		PFR28_02825	0.23	-0.7
3,299,738	-		PFR28_02825	0.23	+0.3
3,299,738	-		PFR28_02825	0.23	-0.3
3,299,753	+		PFR28_02825	0.25	-0.2
3,299,754	-		PFR28_02825	0.25	-1.8
3,300,202	+		PFR28_02825	0.75	-0.4
3,300,202	+		PFR28_02825	0.75	+0.3
3,300,202	+		PFR28_02825	0.75	-0.3
3,300,203	-		PFR28_02825	0.75	-0.2
3,300,203	-		PFR28_02825	0.75	+1.0
3,300,216	-		PFR28_02825	0.77	-0.4
3,300,291	-		PFR28_02825	0.85	-0.0
3,300,291	-		PFR28_02825	0.85	-0.3
3,300,305	+		PFR28_02825	0.87	+0.7
3,300,305	+		PFR28_02825	0.87	+1.0
3,300,323	+		PFR28_02825	0.89	-0.1
3,300,323	+		PFR28_02825	0.89	+0.7
3,300,323	+		PFR28_02825	0.89	-0.1
3,300,323	+		PFR28_02825	0.89	-0.3
3,300,323	+		PFR28_02825	0.89	-0.1
3,300,323	+		PFR28_02825	0.89	-0.2
3,300,324	-		PFR28_02825	0.89	-1.4
3,300,324	-		PFR28_02825	0.89	+0.5
3,300,324	-		PFR28_02825	0.89	+0.3
3,300,324	-		PFR28_02825	0.89	+0.2
3,300,324	-		PFR28_02825	0.89	-0.1
3,300,328	+		PFR28_02825	0.89	-1.8
3,300,328	+		PFR28_02825	0.89	+0.7
3,300,328	+		PFR28_02825	0.89	+1.2
3,300,328	+		PFR28_02825	0.89	+1.2
3,300,328	+		PFR28_02825	0.89	+0.7
3,300,329	-		PFR28_02825	0.89	+1.3
3,300,329	-		PFR28_02825	0.89	+0.9
3,300,329	-		PFR28_02825	0.89	+0.6
3,300,329	-		PFR28_02825	0.89	-1.1
3,300,329	-		PFR28_02825	0.89	-0.4
3,300,329	-		PFR28_02825	0.89	+0.5
3,300,329	-		PFR28_02825	0.89	-0.4
3,300,329	-		PFR28_02825	0.89	-0.1
3,300,329	-		PFR28_02825	0.89	-1.0
3,300,329	-		PFR28_02825	0.89	-0.4
3,300,330	+		PFR28_02825	0.89	+0.5
3,300,330	+		PFR28_02825	0.89	+1.3
3,300,330	+		PFR28_02825	0.89	+0.6
3,300,330	+		PFR28_02825	0.89	-2.2
3,300,330	+		PFR28_02825	0.89	-0.2
3,300,330	+		PFR28_02825	0.89	+0.0
3,300,330	+		PFR28_02825	0.89	+0.7
3,300,330	+		PFR28_02825	0.89	-1.1
3,300,330	+		PFR28_02825	0.89	+2.4
3,300,330	+		PFR28_02825	0.89	-1.2
3,300,330	+		PFR28_02825	0.89	+0.8
3,300,330	+		PFR28_02825	0.89	-0.2
3,300,330	+		PFR28_02825	0.89	-0.4
3,300,330	+		PFR28_02825	0.89	+0.3
3,300,331	-		PFR28_02825	0.90	+0.7
3,300,331	-		PFR28_02825	0.90	-0.3
3,300,331	-		PFR28_02825	0.90	-1.2
3,300,331	-		PFR28_02825	0.90	+0.2