Strain Fitness in Pseudomonas sp. RS175 around PFR28_01369

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
1,486,801	-				-2.0
1,486,802	+				-4.1
1,486,802	+				-3.4
1,486,802	+				-2.8
1,486,802	+				-0.9
1,486,802	+				-2.4
1,486,802	+				-1.5
1,486,803	-				-2.7
1,486,803	-				+0.1
1,486,803	-				-3.3
1,486,803	-				-2.1
1,486,803	-				-3.0
1,486,803	-				-1.2
1,486,803	-				-3.1
1,486,803	-				-1.6
1,486,803	-				-0.5
1,486,803	-				-2.0
1,486,803	-				-2.5
1,486,803	-				-2.7
1,486,862	+				-2.5
1,486,862	+				-3.5
1,486,862	+				-1.2
1,486,919	+				-1.5
1,486,920	-				-2.8
1,486,920	-				-2.4
1,486,928	+				-0.5
1,486,928	+				-2.8
1,486,929	-				-3.9
1,486,929	-				-2.2
1,486,929	-				-2.7
1,486,930	+				-1.5
1,486,930	+				-2.1
1,486,930	+				-2.6
1,486,930	+				-1.6
1,486,930	+				-3.4
1,486,930	+				-2.1
1,486,930	+				-2.3
1,486,930	+				-2.4
1,486,930	+				-1.3
1,486,930	+				-2.1
1,486,930	+				-3.2
1,486,930	+				-1.7
1,486,930	+				-1.7
1,486,930	+				-3.4
1,486,930	+				-4.3
1,486,930	+				-1.7
1,486,931	-				-3.4
1,486,931	-				-2.5
1,486,931	-				-1.4
1,486,931	-				-3.3
1,486,931	-				-1.1
1,486,931	-				-0.7
1,486,931	-				-2.5
1,486,931	-				-2.4
1,486,931	-				-4.1
1,486,931	-				-3.8
1,486,931	-				-3.8
1,486,931	-				-1.5
1,486,931	-				-4.1
1,486,934	+				-2.2
1,486,934	+				-2.4
1,486,934	+				-2.9
1,486,934	+				-3.6
1,486,934	+				-2.8
1,486,934	+				+0.1
1,486,934	+				-1.9
1,486,934	+				-2.0
1,486,934	+				-2.6
1,486,934	+				-2.7
1,486,934	+				-1.7
1,486,934	+				-2.2
1,486,934	+				-0.5
1,486,934	+				-1.9
1,486,934	+				-1.2
1,486,934	+				-1.8
1,486,934	+				-2.5
1,486,934	+				-2.5
1,486,934	+				-1.5
1,486,934	+				-3.9
1,486,934	+				-3.8
1,486,934	+				-2.1
1,486,934	+				-1.5
1,486,934	+				-0.9
1,486,934	+				-3.8
1,486,934	+				-2.8
1,486,934	+				-3.9
1,486,935	-				-1.1
1,486,935	-				-2.7
1,486,935	-				-2.1
1,486,935	-				-3.4
1,486,935	-				-1.2
1,486,935	-				-2.2
1,486,935	-				-1.8
1,486,935	-				-1.4
1,486,935	-				-1.2
1,486,935	-				-1.6
1,486,935	-				-2.1
1,486,935	-				-1.7
1,486,935	-				-0.9
1,486,935	-				-3.3
1,486,935	-				-2.9
1,486,935	-				-1.7
1,486,935	-				-2.9
1,486,935	-				-2.8
1,486,935	-				-3.9
1,486,935	-				-1.8
1,486,935	-				-3.1
1,486,935	-				-3.3
1,486,935	-				-2.9
1,486,935	-				-1.7
1,486,935	-				-0.9
1,486,938	+				-2.1
1,486,938	+				-2.3
1,486,938	+				-1.7
1,486,938	+				-3.8
1,486,938	+				-3.4
1,486,938	+				-2.1
1,486,938	+				-3.1
1,486,938	+				-3.3
1,486,938	+				-1.5
1,486,938	+				-4.0
1,486,938	+				-2.4
1,486,938	+				-3.3
1,486,938	+				-2.7
1,486,938	+				-4.3
1,486,938	+				-2.5
1,486,938	+				-2.2
1,486,938	+				-4.3
1,486,938	+				-3.5
1,486,938	+				-2.1
1,486,938	+				-1.1
1,486,938	+				-2.5
1,486,938	+				-2.1
1,486,938	+				-2.2
1,486,938	+				-1.9
1,486,938	+				-3.4
1,486,938	+				-0.8
1,486,938	+				-1.7
1,486,938	+				-4.1
1,486,938	+				-1.7
1,486,938	+				-1.9
1,486,938	+				-2.8
1,486,938	+				-0.9
1,486,938	+				-4.1
1,486,938	+				-1.2
1,486,938	+				-1.4
1,486,938	+				-2.1
1,486,938	+				-5.0
1,486,938	+				-2.7
1,486,938	+				-2.4
1,486,938	+				-1.7
1,486,938	+				-2.5
1,486,938	+				-2.2
1,486,939	-				-1.5
1,486,939	-				-2.4
1,486,939	-				-1.5
1,486,939	-				-3.1
1,486,939	-				-2.6
1,486,939	-				-3.1
1,486,939	-				-0.7
1,486,939	-				-1.6
1,486,939	-				-3.1
1,486,939	-				-2.2
1,486,939	-				-3.3
1,486,939	-				-2.6
1,486,939	-				-2.7
1,486,939	-				-2.5
1,486,939	-				-3.8
1,486,939	-				-2.3
1,486,939	-				-1.4
1,486,939	-				-1.9
1,486,939	-				-1.1
1,486,939	-				-1.2
1,486,939	-				-1.2
1,486,939	-				-3.8
1,486,939	-				-1.6
1,486,939	-				-2.9
1,486,939	-				-1.2
1,486,939	-				-3.4
1,486,939	-				-0.9
1,486,939	-				-2.2
1,486,939	-				-2.5
1,486,939	-				+0.3
1,486,939	-				-4.0
1,486,939	-				-2.4
1,486,939	-				+0.1
1,486,939	-				-2.5
1,486,939	-				-1.2
1,486,940	+				-1.2
1,486,940	+				-2.0
1,486,940	+				-3.4
1,486,940	+				-2.2
1,486,940	+				-1.9
1,486,940	+				-2.4
1,486,940	+				-2.7
1,486,940	+				-2.9
1,486,940	+				-2.2
1,486,940	+				-3.8
1,486,940	+				-3.5
1,486,940	+				-3.8
1,486,940	+				-2.8
1,486,940	+				-3.9
1,486,940	+				-2.6
1,486,940	+				-1.2
1,486,940	+				-2.6
1,486,940	+				-2.5
1,486,940	+				-2.1
1,486,941	-				-4.1
1,486,941	-				-3.1
1,486,941	-				-2.4
1,486,941	-				-1.6
1,486,941	-				-2.0
1,486,941	-				-2.4
1,486,941	-				-3.2
1,486,941	-				-1.6
1,486,941	-				+0.1
1,486,941	-				-2.4
1,486,941	-				-1.7
1,486,941	-				-1.4
1,486,941	-				-2.7
1,486,941	-				-3.2
1,486,941	-				-2.9
1,486,941	-				-3.5
1,486,941	-				-2.9
1,487,042	+				-3.7
1,487,061	+				-2.4
1,487,061	+				-1.2
1,487,061	+				-3.0
1,487,062	-				+0.4
1,487,062	-				-0.1
1,487,062	-				+0.3
1,487,104	+				-3.0
1,487,104	+				-2.4
1,487,134	+				+0.8
1,487,134	+				+0.9
1,487,134	+				-0.3
1,487,175	+				-0.3
1,487,175	+				-0.7
1,487,175	+				-0.1
1,487,175	+				-0.1
1,487,175	+				-0.5
1,487,175	+				-0.1
1,487,175	+				-1.0
1,487,175	+				+0.9
1,487,176	-				+0.5
1,487,176	-				-1.2
1,487,176	-				+2.1
1,487,176	-				+0.1
1,487,176	-				+0.0
1,487,176	-				-0.6
1,487,176	-				+0.7
1,487,265	+		PFR28_01367	0.31	+2.1
1,487,265	+		PFR28_01367	0.31	-0.2
1,487,266	-		PFR28_01367	0.32	+0.7
1,487,266	-		PFR28_01367	0.32	+0.6
1,487,299	-		PFR28_01367	0.61	+0.6
1,487,402	+				+0.1
1,487,656	+		PFR28_01368	0.78	+0.7
1,487,657	-		PFR28_01368	0.79	+0.0
1,487,657	-		PFR28_01368	0.79	+1.1
1,487,657	-		PFR28_01368	0.79	+0.5
1,487,657	-		PFR28_01368	0.79	+0.2
1,487,657	-		PFR28_01368	0.79	-0.2
1,487,657	-		PFR28_01368	0.79	+0.2
1,487,657	-		PFR28_01368	0.79	+0.4
1,487,703	+				-0.6
1,487,703	+				+0.2
1,487,703	+				-0.5
1,487,703	+				-0.2
1,487,703	+				+0.2
1,487,704	-				+0.4
1,487,738	+				+0.8
1,487,738	+				-0.4
1,487,739	-				+0.1
1,487,739	-				+0.6
1,487,739	-				+0.5
1,487,788	-				+0.3
1,487,797	+				+1.1
1,487,797	+				-1.1
1,487,797	+				-2.3
1,487,797	+				-0.3
1,487,798	-				+1.2
1,487,798	-				+0.3
1,487,798	-				-0.2
1,487,798	-				-0.1
1,487,798	-				+0.3
1,487,798	-				+0.2
1,487,869	+				-1.4
1,487,869	+				-0.2
1,487,869	+				-1.0
1,487,870	-				-0.9
1,487,870	-				+0.5
1,487,911	+				+0.4
1,487,911	+				-0.9
1,487,935	+				-0.3
1,487,936	-				-0.3
1,487,971	+				+1.1
1,487,972	-				+1.5
1,487,972	-				+0.1
1,488,106	+				-0.9
1,488,106	+				+0.1
1,488,106	+				-1.1
1,488,106	+				-2.4
1,488,106	+				-1.0
1,488,107	-				+0.6
1,488,107	-				-2.1
1,488,107	-				-2.1
1,488,155	-				+1.1
1,488,155	-				+0.6
1,488,163	+				+0.9
1,488,163	+				-0.1
1,488,163	+				-2.5
1,488,163	+				-1.5
1,488,163	+				-1.0
1,488,164	-				-0.2
1,488,247	+		PFR28_01369	0.12	-0.3
1,488,248	-		PFR28_01369	0.12	-0.5
1,488,248	-		PFR28_01369	0.12	-0.6
1,488,248	-		PFR28_01369	0.12	+0.1
1,488,248	-		PFR28_01369	0.12	-1.5
1,488,268	+		PFR28_01369	0.13	-1.7
1,488,268	+		PFR28_01369	0.13	-0.5
1,488,269	-		PFR28_01369	0.13	-1.6
1,488,325	+		PFR28_01369	0.14	+0.3
1,488,325	+		PFR28_01369	0.14	+0.3
1,488,326	-		PFR28_01369	0.14	+0.1
1,488,326	-		PFR28_01369	0.14	-0.4
1,488,326	-		PFR28_01369	0.14	-1.5
1,488,451	+		PFR28_01369	0.18	-1.6
1,488,451	+		PFR28_01369	0.18	+0.1
1,488,452	-		PFR28_01369	0.18	-0.8
1,488,452	-		PFR28_01369	0.18	-1.5
1,488,452	-		PFR28_01369	0.18	+0.1
1,488,565	+		PFR28_01369	0.21	-0.5
1,488,664	+		PFR28_01369	0.23	-2.0
1,488,689	+		PFR28_01369	0.24	+0.1
1,488,736	+		PFR28_01369	0.25	+0.3
1,488,736	+		PFR28_01369	0.25	-1.9
1,488,736	+		PFR28_01369	0.25	-0.1
1,488,737	-		PFR28_01369	0.25	+1.1
1,488,737	-		PFR28_01369	0.25	+1.7
1,488,781	+		PFR28_01369	0.27	+0.1
1,488,782	-		PFR28_01369	0.27	+0.5
1,488,782	-		PFR28_01369	0.27	-0.6
1,488,931	+		PFR28_01369	0.31	+1.1
1,488,931	+		PFR28_01369	0.31	-0.5
1,488,932	-		PFR28_01369	0.31	-1.1
1,488,932	-		PFR28_01369	0.31	-2.1
1,488,932	-		PFR28_01369	0.31	-1.1
1,488,952	+		PFR28_01369	0.31	+1.1
1,488,952	+		PFR28_01369	0.31	-1.9
1,489,177	+		PFR28_01369	0.37	-1.3
1,489,178	-		PFR28_01369	0.37	-0.3
1,489,178	-		PFR28_01369	0.37	-1.5
1,489,221	-		PFR28_01369	0.38	-1.6
1,489,482	-		PFR28_01369	0.45	-2.5
1,489,585	+		PFR28_01369	0.48	-0.2
1,489,585	+		PFR28_01369	0.48	+1.5
1,489,585	+		PFR28_01369	0.48	+0.1
1,489,586	-		PFR28_01369	0.48	-1.9
1,489,586	-		PFR28_01369	0.48	-0.1
1,489,586	-		PFR28_01369	0.48	-1.1
1,489,586	-		PFR28_01369	0.48	-0.2
1,489,685	-		PFR28_01369	0.51	-2.0
1,489,742	-		PFR28_01369	0.52	+0.1
1,489,855	+		PFR28_01369	0.55	+0.1
1,489,855	+		PFR28_01369	0.55	-0.8
1,489,855	+		PFR28_01369	0.55	-0.9
1,489,855	+		PFR28_01369	0.55	-1.2
1,489,856	-		PFR28_01369	0.56	+0.6
1,489,885	+		PFR28_01369	0.56	-0.2
1,489,885	+		PFR28_01369	0.56	+0.7
1,489,886	-		PFR28_01369	0.56	-0.2
1,489,886	-		PFR28_01369	0.56	-0.7
1,489,984	+		PFR28_01369	0.59	-2.2
1,490,359	+		PFR28_01369	0.69	-1.2
1,490,359	+		PFR28_01369	0.69	-1.2
1,490,359	+		PFR28_01369	0.69	+0.1
1,490,359	+		PFR28_01369	0.69	-1.4
1,490,359	+		PFR28_01369	0.69	+0.4
1,490,359	+		PFR28_01369	0.69	-0.3
1,490,360	-		PFR28_01369	0.69	-0.9
1,490,360	-		PFR28_01369	0.69	-1.0
1,490,360	-		PFR28_01369	0.69	-0.9
1,490,360	-		PFR28_01369	0.69	-0.2
1,490,360	-		PFR28_01369	0.69	-1.7
1,490,360	-		PFR28_01369	0.69	+0.3
1,490,901	+		PFR28_01369	0.84	+1.5
1,490,902	-		PFR28_01369	0.84	-0.9
1,491,010	+		PFR28_01369	0.87	-0.5
1,491,010	+		PFR28_01369	0.87	-0.4
1,491,010	+		PFR28_01369	0.87	+0.7
1,491,011	-		PFR28_01369	0.87	-2.1
1,491,083	+		PFR28_01369	0.89	+0.8
1,491,156	+				+0.5
1,491,157	-				+2.1
1,491,197	-				+0.2
1,491,217	+				+0.5
1,491,217	+				+0.5
1,491,287	-				+0.5
1,491,389	-				-0.7
1,491,389	-				-1.6
1,491,389	-				-1.9
1,491,409	+				+0.1
1,491,409	+				+0.7
1,491,410	-				-0.9
1,491,452	+				-1.4
1,491,452	+				-1.3
1,491,452	+				+0.3
1,491,452	+				-1.1
1,491,452	+				-1.7
1,491,452	+				-1.7
1,491,452	+				-2.0
1,491,452	+				-1.7
1,491,453	-				-1.7
1,491,481	+				-0.6
1,491,481	+				+0.5
1,491,481	+				+0.5
1,491,481	+				-0.6
1,491,481	+				-1.7
1,491,482	-				+0.1
1,491,482	-				-0.6
1,491,506	+				+0.4
1,491,506	+				+0.1
1,491,506	+				+0.3
1,491,506	+				+0.6
1,491,506	+				+0.3
1,491,506	+				-0.9
1,491,506	+				-0.7
1,491,507	-				+0.1
1,491,507	-				+1.8
1,491,507	-				-1.0
1,491,507	-				+1.5
1,491,507	-				-1.8
1,491,507	-				+0.8
1,491,507	-				-1.2
1,491,507	-				+0.0
1,491,507	-				-1.4
1,491,507	-				-1.0
1,491,512	+				-1.4
1,491,512	+				+0.4
1,491,512	+				-0.2
1,491,512	+				+0.1
1,491,512	+				-2.1
1,491,549	-				+0.6
1,491,585	+				+1.1
1,491,627	+				-0.3
1,491,677	+				+0.2
1,491,678	-				+0.4
1,491,678	-				+1.3
1,491,716	+				+0.5
1,491,745	+				+0.3
1,491,745	+				+0.5
1,491,746	-				+0.3
1,491,802	+				+0.3
1,491,802	+				+0.6
1,491,802	+				+1.0
1,491,802	+				+0.3
1,491,802	+				-0.3
1,491,802	+				+0.0
1,491,802	+				+0.3
1,491,802	+				+0.5
1,491,802	+				+0.4
1,491,802	+				+0.5
1,491,803	-				+0.5
1,491,803	-				+0.6
1,491,803	-				+0.5
1,491,803	-				+0.5
1,491,803	-				+0.0
1,491,803	-				+0.7
1,491,803	-				+0.5
1,491,803	-				+1.5
1,491,803	-				+0.9
1,491,867	-				+0.3
1,491,873	-				+0.4
1,491,873	-				+0.3
1,491,874	+				-0.0
1,491,875	-				-0.2
1,491,875	-				+0.5
1,491,903	-		PFR28_01370	0.11	+0.6
1,491,919	+		PFR28_01370	0.11	+0.2
1,491,919	+		PFR28_01370	0.11	+0.3
1,491,919	+		PFR28_01370	0.11	+1.0
1,491,920	-		PFR28_01370	0.11	+0.4
1,491,920	-		PFR28_01370	0.11	+0.9
1,491,920	-		PFR28_01370	0.11	+0.7
1,491,961	+		PFR28_01370	0.13	+0.1
1,491,961	+		PFR28_01370	0.13	+0.2
1,491,961	+		PFR28_01370	0.13	+0.3
1,491,961	+		PFR28_01370	0.13	+0.6
1,491,961	+		PFR28_01370	0.13	+0.5
1,491,962	-		PFR28_01370	0.13	+1.0
1,491,962	-		PFR28_01370	0.13	+0.8
1,492,123	+		PFR28_01370	0.20	+0.3
1,492,124	-		PFR28_01370	0.20	+0.6
1,492,124	-		PFR28_01370	0.20	-0.2
1,492,186	+		PFR28_01370	0.23	+0.2
1,492,186	+		PFR28_01370	0.23	+0.3
1,492,187	-		PFR28_01370	0.23	+0.3
1,492,187	-		PFR28_01370	0.23	+0.5
1,492,187	-		PFR28_01370	0.23	+1.0
1,492,187	-		PFR28_01370	0.23	+0.4
1,492,187	-		PFR28_01370	0.23	+0.6
1,492,363	+		PFR28_01370	0.31	+0.6
1,492,363	+		PFR28_01370	0.31	+0.6
1,492,363	+		PFR28_01370	0.31	+0.7
1,492,364	-		PFR28_01370	0.31	+0.7
1,492,364	-		PFR28_01370	0.31	+0.7
1,492,483	+		PFR28_01370	0.36	+0.3
1,492,483	+		PFR28_01370	0.36	+0.5
1,492,483	+		PFR28_01370	0.36	+0.6
1,492,483	+		PFR28_01370	0.36	+0.2
1,492,483	+		PFR28_01370	0.36	+0.1
1,492,484	-		PFR28_01370	0.36	+0.4
1,492,484	-		PFR28_01370	0.36	+0.1
1,492,484	-		PFR28_01370	0.36	+0.3