Experiment: D-Glucose (C) 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFR28_01041 and PFR28_01042 are separated by 62 nucleotides PFR28_01042 and PFR28_01043 are separated by 2 nucleotides
PFR28_01041: PFR28_01041 - Zinc transport protein ZntB, at 1,139,271 to 1,140,266
_01041
PFR28_01042: PFR28_01042 - hypothetical protein, at 1,140,329 to 1,140,574
_01042
PFR28_01043: PFR28_01043 - hypothetical protein, at 1,140,577 to 1,141,401
_01043
Position (kb)
1140
1141 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.721 kb on + strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.722 kb on - strand, within PFR28_01041 at 1139.723 kb on + strand, within PFR28_01041 at 1139.723 kb on + strand, within PFR28_01041 at 1139.724 kb on - strand, within PFR28_01041 at 1139.724 kb on - strand, within PFR28_01041 at 1139.724 kb on - strand, within PFR28_01041 at 1139.733 kb on + strand, within PFR28_01041 at 1139.821 kb on - strand, within PFR28_01041 at 1139.958 kb on + strand, within PFR28_01041 at 1139.958 kb on + strand, within PFR28_01041 at 1139.959 kb on - strand, within PFR28_01041 at 1139.959 kb on - strand, within PFR28_01041 at 1139.959 kb on - strand, within PFR28_01041 at 1139.959 kb on - strand, within PFR28_01041 at 1139.991 kb on + strand, within PFR28_01041 at 1140.084 kb on + strand, within PFR28_01041 at 1140.084 kb on + strand, within PFR28_01041 at 1140.084 kb on + strand, within PFR28_01041 at 1140.085 kb on - strand, within PFR28_01041 at 1140.085 kb on - strand, within PFR28_01041 at 1140.328 kb on + strand at 1140.328 kb on + strand at 1140.328 kb on + strand at 1140.328 kb on + strand at 1140.328 kb on + strand at 1140.329 kb on - strand at 1140.538 kb on + strand, within PFR28_01042 at 1140.562 kb on + strand at 1140.576 kb on + strand at 1140.577 kb on - strand at 1140.642 kb on + strand at 1140.841 kb on + strand, within PFR28_01043 at 1140.851 kb on + strand, within PFR28_01043 at 1140.858 kb on + strand, within PFR28_01043 at 1140.858 kb on + strand, within PFR28_01043 at 1140.858 kb on + strand, within PFR28_01043 at 1140.909 kb on + strand, within PFR28_01043 at 1140.931 kb on + strand, within PFR28_01043 at 1140.931 kb on + strand, within PFR28_01043 at 1141.039 kb on + strand, within PFR28_01043 at 1141.059 kb on + strand, within PFR28_01043 at 1141.154 kb on + strand, within PFR28_01043 at 1141.237 kb on + strand, within PFR28_01043 at 1141.237 kb on + strand, within PFR28_01043 at 1141.237 kb on + strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.238 kb on - strand, within PFR28_01043 at 1141.252 kb on + strand, within PFR28_01043 at 1141.252 kb on + strand, within PFR28_01043 at 1141.253 kb on - strand, within PFR28_01043 at 1141.417 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.422 kb on + strand at 1141.471 kb on + strand at 1141.471 kb on + strand at 1141.471 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) 10 mM remove 1,139,721 + PFR28_01041 0.45 +1.1 1,139,721 + PFR28_01041 0.45 +0.4 1,139,721 + PFR28_01041 0.45 -0.5 1,139,721 + PFR28_01041 0.45 -0.3 1,139,721 + PFR28_01041 0.45 +0.9 1,139,721 + PFR28_01041 0.45 +0.3 1,139,721 + PFR28_01041 0.45 -0.2 1,139,721 + PFR28_01041 0.45 -0.9 1,139,721 + PFR28_01041 0.45 -1.2 1,139,721 + PFR28_01041 0.45 +0.1 1,139,721 + PFR28_01041 0.45 -0.1 1,139,721 + PFR28_01041 0.45 -0.0 1,139,721 + PFR28_01041 0.45 -0.2 1,139,721 + PFR28_01041 0.45 +0.7 1,139,721 + PFR28_01041 0.45 -0.3 1,139,721 + PFR28_01041 0.45 +0.1 1,139,722 - PFR28_01041 0.45 +1.5 1,139,722 - PFR28_01041 0.45 -0.2 1,139,722 - PFR28_01041 0.45 +0.1 1,139,722 - PFR28_01041 0.45 -1.6 1,139,722 - PFR28_01041 0.45 -0.1 1,139,722 - PFR28_01041 0.45 +1.1 1,139,722 - PFR28_01041 0.45 -1.4 1,139,722 - PFR28_01041 0.45 +0.1 1,139,722 - PFR28_01041 0.45 -0.0 1,139,722 - PFR28_01041 0.45 -0.7 1,139,722 - PFR28_01041 0.45 -0.8 1,139,722 - PFR28_01041 0.45 -0.0 1,139,722 - PFR28_01041 0.45 -0.1 1,139,722 - PFR28_01041 0.45 -0.0 1,139,722 - PFR28_01041 0.45 -0.4 1,139,723 + PFR28_01041 0.45 +0.5 1,139,723 + PFR28_01041 0.45 +0.4 1,139,724 - PFR28_01041 0.45 -0.4 1,139,724 - PFR28_01041 0.45 -0.9 1,139,724 - PFR28_01041 0.45 -0.4 1,139,733 + PFR28_01041 0.46 -0.1 1,139,821 - PFR28_01041 0.55 +0.7 1,139,958 + PFR28_01041 0.69 +0.5 1,139,958 + PFR28_01041 0.69 +0.4 1,139,959 - PFR28_01041 0.69 +0.7 1,139,959 - PFR28_01041 0.69 +0.3 1,139,959 - PFR28_01041 0.69 +1.1 1,139,959 - PFR28_01041 0.69 +1.1 1,139,991 + PFR28_01041 0.72 +1.1 1,140,084 + PFR28_01041 0.82 -0.6 1,140,084 + PFR28_01041 0.82 -0.9 1,140,084 + PFR28_01041 0.82 +0.1 1,140,085 - PFR28_01041 0.82 -1.1 1,140,085 - PFR28_01041 0.82 -1.2 1,140,328 + -0.7 1,140,328 + -1.0 1,140,328 + +0.0 1,140,328 + +0.7 1,140,328 + -0.1 1,140,329 - +1.1 1,140,538 + PFR28_01042 0.85 -0.9 1,140,562 + -2.6 1,140,576 + -0.0 1,140,577 - -0.4 1,140,642 + +1.7 1,140,841 + PFR28_01043 0.32 -2.2 1,140,851 + PFR28_01043 0.33 +0.4 1,140,858 + PFR28_01043 0.34 +1.1 1,140,858 + PFR28_01043 0.34 -0.6 1,140,858 + PFR28_01043 0.34 +1.1 1,140,909 + PFR28_01043 0.40 +2.7 1,140,931 + PFR28_01043 0.43 +0.3 1,140,931 + PFR28_01043 0.43 +0.1 1,141,039 + PFR28_01043 0.56 +1.1 1,141,059 + PFR28_01043 0.58 +0.1 1,141,154 + PFR28_01043 0.70 +0.8 1,141,237 + PFR28_01043 0.80 +1.1 1,141,237 + PFR28_01043 0.80 -1.9 1,141,237 + PFR28_01043 0.80 -0.4 1,141,238 - PFR28_01043 0.80 +0.1 1,141,238 - PFR28_01043 0.80 +0.6 1,141,238 - PFR28_01043 0.80 -1.4 1,141,238 - PFR28_01043 0.80 +1.1 1,141,238 - PFR28_01043 0.80 -0.4 1,141,238 - PFR28_01043 0.80 +0.6 1,141,252 + PFR28_01043 0.82 +1.1 1,141,252 + PFR28_01043 0.82 -0.4 1,141,253 - PFR28_01043 0.82 +3.1 1,141,417 + +0.3 1,141,422 + +1.3 1,141,422 + +1.4 1,141,422 + -1.4 1,141,422 + +0.1 1,141,422 + -0.2 1,141,422 + -0.4 1,141,422 + -0.7 1,141,422 + -1.0 1,141,422 + -0.9 1,141,422 + -0.3 1,141,471 + -0.1 1,141,471 + -0.1 1,141,471 + +0.3
Or see this region's nucleotide sequence