Experiment: D-Glucose (C) 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFR28_00276 and PFR28_00277 overlap by 4 nucleotides PFR28_00277 and PFR28_00278 are separated by 43 nucleotides PFR28_00278 and PFR28_00279 are separated by 63 nucleotides
PFR28_00276: PFR28_00276 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 305,581 to 306,630
_00276
PFR28_00277: PFR28_00277 - Queuine tRNA-ribosyltransferase, at 306,627 to 307,760
_00277
PFR28_00278: PFR28_00278 - Sec translocon accessory complex subunit YajC, at 307,804 to 308,139
_00278
PFR28_00279: PFR28_00279 - Protein translocase subunit SecD, at 308,203 to 310,071
_00279
Position (kb) 306
307
308 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 306.022 kb on + strand, within PFR28_00276 at 306.022 kb on + strand, within PFR28_00276 at 306.022 kb on + strand, within PFR28_00276 at 306.022 kb on + strand, within PFR28_00276 at 306.022 kb on + strand, within PFR28_00276 at 306.022 kb on + strand, within PFR28_00276 at 306.023 kb on - strand, within PFR28_00276 at 306.023 kb on - strand, within PFR28_00276 at 306.023 kb on - strand, within PFR28_00276 at 306.023 kb on - strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.024 kb on + strand, within PFR28_00276 at 306.025 kb on - strand, within PFR28_00276 at 306.025 kb on - strand, within PFR28_00276 at 306.025 kb on - strand, within PFR28_00276 at 306.025 kb on - strand, within PFR28_00276 at 306.026 kb on + strand, within PFR28_00276 at 306.026 kb on + strand, within PFR28_00276 at 306.026 kb on + strand, within PFR28_00276 at 306.026 kb on + strand, within PFR28_00276 at 306.027 kb on - strand, within PFR28_00276 at 306.027 kb on - strand, within PFR28_00276 at 306.027 kb on - strand, within PFR28_00276 at 306.073 kb on + strand, within PFR28_00276 at 306.073 kb on + strand, within PFR28_00276 at 306.529 kb on + strand at 306.529 kb on + strand at 306.529 kb on + strand at 306.530 kb on - strand at 306.530 kb on - strand at 306.626 kb on + strand at 306.626 kb on + strand at 306.626 kb on + strand at 306.626 kb on + strand at 306.626 kb on + strand at 306.627 kb on - strand at 306.627 kb on - strand at 306.748 kb on - strand, within PFR28_00277 at 306.748 kb on - strand, within PFR28_00277 at 307.045 kb on + strand, within PFR28_00277 at 307.046 kb on - strand, within PFR28_00277 at 307.327 kb on - strand, within PFR28_00277 at 307.551 kb on + strand, within PFR28_00277 at 307.551 kb on + strand, within PFR28_00277 at 307.619 kb on + strand, within PFR28_00277 at 307.619 kb on + strand, within PFR28_00277 at 307.662 kb on - strand at 307.722 kb on + strand at 307.773 kb on + strand at 307.783 kb on + strand at 307.783 kb on + strand at 308.137 kb on + strand at 308.137 kb on + strand at 308.137 kb on + strand at 308.137 kb on + strand at 308.137 kb on + strand at 308.141 kb on + strand at 308.141 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) 10 mM remove 306,022 + PFR28_00276 0.42 -0.7 306,022 + PFR28_00276 0.42 +0.2 306,022 + PFR28_00276 0.42 +1.2 306,022 + PFR28_00276 0.42 -0.0 306,022 + PFR28_00276 0.42 -0.5 306,022 + PFR28_00276 0.42 -0.1 306,023 - PFR28_00276 0.42 +1.6 306,023 - PFR28_00276 0.42 -1.1 306,023 - PFR28_00276 0.42 -1.2 306,023 - PFR28_00276 0.42 +0.7 306,024 + PFR28_00276 0.42 -1.2 306,024 + PFR28_00276 0.42 -1.2 306,024 + PFR28_00276 0.42 -0.8 306,024 + PFR28_00276 0.42 +1.7 306,024 + PFR28_00276 0.42 -1.5 306,024 + PFR28_00276 0.42 +0.5 306,024 + PFR28_00276 0.42 +0.8 306,024 + PFR28_00276 0.42 +0.8 306,025 - PFR28_00276 0.42 -0.8 306,025 - PFR28_00276 0.42 +3.2 306,025 - PFR28_00276 0.42 +0.2 306,025 - PFR28_00276 0.42 +0.7 306,026 + PFR28_00276 0.42 +0.7 306,026 + PFR28_00276 0.42 -0.2 306,026 + PFR28_00276 0.42 +0.8 306,026 + PFR28_00276 0.42 -0.3 306,027 - PFR28_00276 0.42 +0.9 306,027 - PFR28_00276 0.42 +1.2 306,027 - PFR28_00276 0.42 -2.1 306,073 + PFR28_00276 0.47 -0.1 306,073 + PFR28_00276 0.47 +0.4 306,529 + +1.1 306,529 + -0.2 306,529 + +1.2 306,530 - -0.2 306,530 - +0.8 306,626 + +0.1 306,626 + +0.2 306,626 + +1.2 306,626 + +0.7 306,626 + +1.8 306,627 - -0.3 306,627 - -1.1 306,748 - PFR28_00277 0.11 -0.3 306,748 - PFR28_00277 0.11 -0.8 307,045 + PFR28_00277 0.37 -1.3 307,046 - PFR28_00277 0.37 -0.3 307,327 - PFR28_00277 0.62 -0.3 307,551 + PFR28_00277 0.81 -1.3 307,551 + PFR28_00277 0.81 +1.5 307,619 + PFR28_00277 0.87 +0.2 307,619 + PFR28_00277 0.87 +2.2 307,662 - +0.2 307,722 + -0.3 307,773 + -0.5 307,783 + -0.3 307,783 + -1.3 308,137 + +0.1 308,137 + +0.0 308,137 + -2.2 308,137 + +0.6 308,137 + +1.4 308,141 + +0.5 308,141 + +0.7
Or see this region's nucleotide sequence