Experiment: Control_ECRC101
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yegT and MCAODC_21065 overlap by 4 nucleotides MCAODC_21065 and yegV overlap by 4 nucleotides yegV and yegW overlap by 27 nucleotides
MCAODC_21060: yegT - Putative nucleoside transporter YegT, at 1,012,198 to 1,013,475
yegT
MCAODC_21065: MCAODC_21065 - ADP-ribosylglycohydrolase family protein, at 1,013,472 to 1,014,476
_21065
MCAODC_21070: yegV - Uncharacterized sugar kinase YegV, at 1,014,473 to 1,015,438
yegV
MCAODC_21075: yegW - Uncharacterized HTH-type transcriptional regulator YegW, at 1,015,412 to 1,016,158
yegW
Position (kb)
1013
1014
1015 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.510 kb on + strand, within yegT at 1012.511 kb on - strand, within yegT at 1012.512 kb on + strand, within yegT at 1012.513 kb on - strand, within yegT at 1012.677 kb on + strand, within yegT at 1012.678 kb on - strand, within yegT at 1012.779 kb on + strand, within yegT at 1012.780 kb on - strand, within yegT at 1012.780 kb on - strand, within yegT at 1012.780 kb on - strand, within yegT at 1012.879 kb on + strand, within yegT at 1012.879 kb on + strand, within yegT at 1012.879 kb on + strand, within yegT at 1012.880 kb on - strand, within yegT at 1012.880 kb on - strand, within yegT at 1012.882 kb on + strand, within yegT at 1012.882 kb on + strand, within yegT at 1012.900 kb on + strand, within yegT at 1013.132 kb on + strand, within yegT at 1013.133 kb on - strand, within yegT at 1013.146 kb on + strand, within yegT at 1013.150 kb on - strand, within yegT at 1013.161 kb on + strand, within yegT at 1013.167 kb on + strand, within yegT at 1013.167 kb on + strand, within yegT at 1013.167 kb on + strand, within yegT at 1013.167 kb on + strand, within yegT at 1013.167 kb on + strand, within yegT at 1013.168 kb on - strand, within yegT at 1013.168 kb on - strand, within yegT at 1013.168 kb on - strand, within yegT at 1013.168 kb on - strand, within yegT at 1013.168 kb on - strand, within yegT at 1013.193 kb on + strand, within yegT at 1013.486 kb on + strand at 1013.629 kb on - strand, within MCAODC_21065 at 1013.629 kb on - strand, within MCAODC_21065 at 1013.732 kb on + strand, within MCAODC_21065 at 1013.733 kb on - strand, within MCAODC_21065 at 1013.779 kb on + strand, within MCAODC_21065 at 1013.780 kb on - strand, within MCAODC_21065 at 1013.783 kb on - strand, within MCAODC_21065 at 1013.783 kb on - strand, within MCAODC_21065 at 1013.890 kb on + strand, within MCAODC_21065 at 1013.891 kb on - strand, within MCAODC_21065 at 1013.930 kb on + strand, within MCAODC_21065 at 1013.931 kb on - strand, within MCAODC_21065 at 1014.020 kb on + strand, within MCAODC_21065 at 1014.406 kb on + strand at 1014.406 kb on + strand at 1014.510 kb on + strand at 1014.510 kb on + strand at 1014.511 kb on - strand at 1014.573 kb on - strand, within yegV at 1014.753 kb on + strand, within yegV at 1014.832 kb on + strand, within yegV at 1014.954 kb on + strand, within yegV at 1015.012 kb on + strand, within yegV at 1015.013 kb on - strand, within yegV at 1015.013 kb on - strand, within yegV at 1015.035 kb on + strand, within yegV at 1015.036 kb on - strand, within yegV at 1015.129 kb on - strand, within yegV at 1015.205 kb on + strand, within yegV at 1015.206 kb on - strand, within yegV at 1015.297 kb on - strand, within yegV at 1015.339 kb on - strand, within yegV
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101 remove 1,012,510 + yegT MCAODC_21060 0.24 +0.1 1,012,510 + yegT MCAODC_21060 0.24 +4.0 1,012,510 + yegT MCAODC_21060 0.24 -0.5 1,012,510 + yegT MCAODC_21060 0.24 -0.1 1,012,510 + yegT MCAODC_21060 0.24 +0.6 1,012,510 + yegT MCAODC_21060 0.24 -0.1 1,012,510 + yegT MCAODC_21060 0.24 -0.4 1,012,510 + yegT MCAODC_21060 0.24 -0.9 1,012,511 - yegT MCAODC_21060 0.24 -1.5 1,012,512 + yegT MCAODC_21060 0.25 +1.1 1,012,513 - yegT MCAODC_21060 0.25 -0.9 1,012,677 + yegT MCAODC_21060 0.37 -1.9 1,012,678 - yegT MCAODC_21060 0.38 +0.4 1,012,779 + yegT MCAODC_21060 0.45 +0.4 1,012,780 - yegT MCAODC_21060 0.46 -1.1 1,012,780 - yegT MCAODC_21060 0.46 -1.4 1,012,780 - yegT MCAODC_21060 0.46 -0.6 1,012,879 + yegT MCAODC_21060 0.53 -0.1 1,012,879 + yegT MCAODC_21060 0.53 +0.4 1,012,879 + yegT MCAODC_21060 0.53 +0.5 1,012,880 - yegT MCAODC_21060 0.53 -1.3 1,012,880 - yegT MCAODC_21060 0.53 -0.1 1,012,882 + yegT MCAODC_21060 0.54 +0.9 1,012,882 + yegT MCAODC_21060 0.54 -1.6 1,012,900 + yegT MCAODC_21060 0.55 -0.5 1,013,132 + yegT MCAODC_21060 0.73 -0.1 1,013,133 - yegT MCAODC_21060 0.73 +0.3 1,013,146 + yegT MCAODC_21060 0.74 -0.2 1,013,150 - yegT MCAODC_21060 0.74 +0.8 1,013,161 + yegT MCAODC_21060 0.75 -0.5 1,013,167 + yegT MCAODC_21060 0.76 +0.6 1,013,167 + yegT MCAODC_21060 0.76 -0.5 1,013,167 + yegT MCAODC_21060 0.76 +0.0 1,013,167 + yegT MCAODC_21060 0.76 -0.9 1,013,167 + yegT MCAODC_21060 0.76 -0.0 1,013,168 - yegT MCAODC_21060 0.76 -0.4 1,013,168 - yegT MCAODC_21060 0.76 -1.3 1,013,168 - yegT MCAODC_21060 0.76 -1.2 1,013,168 - yegT MCAODC_21060 0.76 -1.2 1,013,168 - yegT MCAODC_21060 0.76 -1.2 1,013,193 + yegT MCAODC_21060 0.78 +0.1 1,013,486 + -1.6 1,013,629 - MCAODC_21065 0.16 +0.1 1,013,629 - MCAODC_21065 0.16 +0.9 1,013,732 + MCAODC_21065 0.26 +0.6 1,013,733 - MCAODC_21065 0.26 +1.6 1,013,779 + MCAODC_21065 0.31 -1.9 1,013,780 - MCAODC_21065 0.31 +1.0 1,013,783 - MCAODC_21065 0.31 -2.5 1,013,783 - MCAODC_21065 0.31 +1.0 1,013,890 + MCAODC_21065 0.42 -0.4 1,013,891 - MCAODC_21065 0.42 +2.3 1,013,930 + MCAODC_21065 0.46 +0.6 1,013,931 - MCAODC_21065 0.46 +0.5 1,014,020 + MCAODC_21065 0.55 +0.8 1,014,406 + -0.1 1,014,406 + +1.0 1,014,510 + -2.1 1,014,510 + +0.8 1,014,511 - +0.1 1,014,573 - yegV MCAODC_21070 0.10 +1.0 1,014,753 + yegV MCAODC_21070 0.29 -1.7 1,014,832 + yegV MCAODC_21070 0.37 +0.2 1,014,954 + yegV MCAODC_21070 0.50 -0.3 1,015,012 + yegV MCAODC_21070 0.56 -0.3 1,015,013 - yegV MCAODC_21070 0.56 +3.3 1,015,013 - yegV MCAODC_21070 0.56 +0.7 1,015,035 + yegV MCAODC_21070 0.58 +0.5 1,015,036 - yegV MCAODC_21070 0.58 -0.2 1,015,129 - yegV MCAODC_21070 0.68 -1.0 1,015,205 + yegV MCAODC_21070 0.76 +2.8 1,015,206 - yegV MCAODC_21070 0.76 +1.3 1,015,297 - yegV MCAODC_21070 0.85 -1.9 1,015,339 - yegV MCAODC_21070 0.90 +0.9
Or see this region's nucleotide sequence