Strain Fitness in Escherichia coli ECRC101 around MCAODC_16505

Experiment: Control_ECRC101

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC101
191,783	-				-0.4
191,946	-	yddE	MCAODC_16500	0.19	-0.8
191,958	-	yddE	MCAODC_16500	0.21	+0.2
192,305	-	yddE	MCAODC_16500	0.59	-1.6
192,408	-	yddE	MCAODC_16500	0.71	-0.6
192,422	+	yddE	MCAODC_16500	0.72	+1.0
192,422	+	yddE	MCAODC_16500	0.72	+1.5
192,423	-	yddE	MCAODC_16500	0.73	+0.1
192,423	-	yddE	MCAODC_16500	0.73	+1.6
192,423	-	yddE	MCAODC_16500	0.73	-0.1
192,423	-	yddE	MCAODC_16500	0.73	-1.1
192,426	+	yddE	MCAODC_16500	0.73	+0.3
192,438	-	yddE	MCAODC_16500	0.74	+1.5
192,457	+	yddE	MCAODC_16500	0.76	+0.5
192,457	+	yddE	MCAODC_16500	0.76	+0.2
192,542	+	yddE	MCAODC_16500	0.86	+2.4
192,577	+	yddE	MCAODC_16500	0.90	-1.4
192,577	+	yddE	MCAODC_16500	0.90	+0.1
192,634	+				+0.9
192,634	+				-0.1
192,693	+				-1.1
192,693	+				+1.4
192,698	+				-1.8
192,699	-				-0.7
192,781	+				-0.1
192,781	+				-0.5
192,782	-				-0.1
192,997	+	narI	MCAODC_16505	0.37	+2.8
192,998	-	narI	MCAODC_16505	0.37	+0.9
193,160	+	narI	MCAODC_16505	0.61	+1.3
193,161	-	narI	MCAODC_16505	0.61	+0.7
193,195	-	narI	MCAODC_16505	0.66	-0.7
193,384	-				+0.2
193,389	+				-0.2
193,390	-				-1.0
193,454	+				-0.9
193,454	+				+0.8
193,528	-	narW	MCAODC_16510	0.15	-0.1
193,606	+	narW	MCAODC_16510	0.26	-0.3
193,606	+	narW	MCAODC_16510	0.26	+1.8
193,607	-	narW	MCAODC_16510	0.26	+1.5
193,771	+	narW	MCAODC_16510	0.50	+0.1
193,772	-	narW	MCAODC_16510	0.50	+0.8
193,772	-	narW	MCAODC_16510	0.50	-1.6
193,778	-	narW	MCAODC_16510	0.51	+0.4
193,802	+	narW	MCAODC_16510	0.54	+2.1
194,011	-	narW	MCAODC_16510	0.84	-0.7
194,308	+	narH	MCAODC_16515	0.12	-0.7
194,308	+	narH	MCAODC_16515	0.12	-1.9
194,332	+	narH	MCAODC_16515	0.14	-1.6
194,333	-	narH	MCAODC_16515	0.14	-0.5
194,333	-	narH	MCAODC_16515	0.14	-1.1
194,333	-	narH	MCAODC_16515	0.14	-0.1
194,364	+	narH	MCAODC_16515	0.16	+0.5
194,364	+	narH	MCAODC_16515	0.16	-1.1
194,365	-	narH	MCAODC_16515	0.16	+0.0
194,365	-	narH	MCAODC_16515	0.16	+0.5
194,384	+	narH	MCAODC_16515	0.17	-1.1
194,385	-	narH	MCAODC_16515	0.17	+0.3
194,418	-	narH	MCAODC_16515	0.19	-1.4
194,418	-	narH	MCAODC_16515	0.19	+1.4
194,418	-	narH	MCAODC_16515	0.19	+2.2
194,419	+	narH	MCAODC_16515	0.19	+1.8
194,420	-	narH	MCAODC_16515	0.20	+0.4