Strain Fitness in Escherichia coli ECRC101 around MCAODC_05950

Experiment: Control_ECRC101

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC101
1,194,633	+	espB	MCAODC_05940	0.47	+0.5
1,194,633	+	espB	MCAODC_05940	0.47	+0.5
1,194,634	-	espB	MCAODC_05940	0.47	+0.4
1,195,005	+	espB	MCAODC_05940	0.87	-3.0
1,195,005	+	espB	MCAODC_05940	0.87	+0.8
1,195,006	-	espB	MCAODC_05940	0.87	-0.4
1,195,006	-	espB	MCAODC_05940	0.87	-0.8
1,195,006	-	espB	MCAODC_05940	0.87	-0.6
1,195,035	+				+0.7
1,195,035	+				-0.6
1,195,056	+				+0.6
1,195,056	+				+0.3
1,195,056	+				-0.8
1,195,056	+				-0.8
1,195,056	+				+0.4
1,195,056	+				-0.9
1,195,056	+				+0.3
1,195,056	+				+0.4
1,195,057	-				-0.3
1,195,058	+				-0.2
1,195,058	+				-0.8
1,195,058	+				+4.3
1,195,058	+				-1.8
1,195,059	-				-0.1
1,195,126	+				-1.0
1,195,126	+				-0.3
1,195,127	-				-1.2
1,195,168	+				-0.5
1,195,168	+				-1.9
1,195,169	-				-0.3
1,195,196	+	cesD2	MCAODC_05945	0.15	+0.3
1,195,375	+	cesD2	MCAODC_05945	0.59	-1.8
1,195,420	-	cesD2	MCAODC_05945	0.70	-0.7
1,195,532	+				+0.2
1,195,619	+	escF	MCAODC_05950	0.18	+0.7
1,195,653	-	escF	MCAODC_05950	0.34	+0.7
1,195,828	+				-0.5
1,196,008	+	escG	MCAODC_05955	0.73	-0.8
1,196,086	+				+0.5
1,196,088	+				-0.6
1,196,109	-				-0.4
1,196,125	+				+1.6
1,196,126	-				-0.6
1,196,127	+				-0.8
1,196,146	+				+0.5
1,196,152	+				-0.7
1,196,152	+				-0.5
1,196,167	+				-1.8
1,196,173	+				+0.1
1,196,186	-				-1.0
1,196,198	-				+0.1
1,196,198	-				+0.0
1,196,217	+				+0.5
1,196,217	+				-0.2
1,196,217	+				-0.2
1,196,218	-				+2.7
1,196,218	-				-0.6
1,196,218	-				-0.3
1,196,218	-				-0.4
1,196,380	+	espF	MCAODC_05960	0.28	-0.9
1,196,380	+	espF	MCAODC_05960	0.28	+0.2
1,196,380	+	espF	MCAODC_05960	0.28	+1.8
1,196,381	-	espF	MCAODC_05960	0.29	-0.2
1,196,381	-	espF	MCAODC_05960	0.29	-0.7
1,196,521	+	espF	MCAODC_05960	0.47	-0.3
1,196,521	+	espF	MCAODC_05960	0.47	+0.2