Strain Fitness in Escherichia coli ECRC101 around MCAODC_04275
Experiment: Control_ECRC101
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Control_ECRC101 |
---|---|---|---|---|---|
remove | |||||
867,891 | - | +1.8 | |||
867,942 | + | -0.3 | |||
867,943 | - | +1.2 | |||
867,976 | + | +0.4 | |||
867,976 | + | -0.1 | |||
867,976 | + | -0.1 | |||
867,977 | - | -0.1 | |||
867,977 | - | +0.1 | |||
867,977 | - | +0.5 | |||
867,977 | - | -0.7 | |||
867,977 | - | -0.9 | |||
867,988 | + | -0.2 | |||
867,989 | - | +0.8 | |||
868,008 | - | +0.7 | |||
868,102 | + | glpF | MCAODC_04270 | 0.11 | +0.1 |
868,103 | - | glpF | MCAODC_04270 | 0.11 | -0.1 |
868,103 | - | glpF | MCAODC_04270 | 0.11 | +0.4 |
868,176 | + | glpF | MCAODC_04270 | 0.20 | -1.4 |
868,176 | + | glpF | MCAODC_04270 | 0.20 | +0.8 |
868,176 | + | glpF | MCAODC_04270 | 0.20 | -2.1 |
868,209 | - | glpF | MCAODC_04270 | 0.24 | +0.6 |
868,220 | + | glpF | MCAODC_04270 | 0.25 | -1.1 |
868,221 | - | glpF | MCAODC_04270 | 0.25 | +1.0 |
868,274 | + | glpF | MCAODC_04270 | 0.31 | -0.9 |
868,316 | - | glpF | MCAODC_04270 | 0.36 | +0.1 |
868,329 | + | glpF | MCAODC_04270 | 0.38 | +1.0 |
868,332 | + | glpF | MCAODC_04270 | 0.38 | -0.1 |
868,332 | + | glpF | MCAODC_04270 | 0.38 | +1.4 |
868,415 | + | glpF | MCAODC_04270 | 0.48 | +1.3 |
868,416 | - | glpF | MCAODC_04270 | 0.48 | +1.7 |
868,419 | + | glpF | MCAODC_04270 | 0.49 | -0.2 |
868,419 | + | glpF | MCAODC_04270 | 0.49 | +2.4 |
868,419 | + | glpF | MCAODC_04270 | 0.49 | +1.1 |
868,420 | - | glpF | MCAODC_04270 | 0.49 | +3.2 |
868,420 | - | glpF | MCAODC_04270 | 0.49 | -0.7 |
868,586 | + | glpF | MCAODC_04270 | 0.68 | -0.0 |
868,586 | + | glpF | MCAODC_04270 | 0.68 | +1.2 |
868,586 | + | glpF | MCAODC_04270 | 0.68 | +0.9 |
868,586 | + | glpF | MCAODC_04270 | 0.68 | +0.7 |
868,587 | - | glpF | MCAODC_04270 | 0.68 | +0.7 |
868,587 | - | glpF | MCAODC_04270 | 0.68 | +0.6 |
868,587 | - | glpF | MCAODC_04270 | 0.68 | -0.1 |
868,587 | - | glpF | MCAODC_04270 | 0.68 | +1.2 |
868,701 | + | glpF | MCAODC_04270 | 0.82 | +0.5 |
868,702 | - | glpF | MCAODC_04270 | 0.82 | -0.1 |
868,702 | - | glpF | MCAODC_04270 | 0.82 | +1.0 |
868,702 | - | glpF | MCAODC_04270 | 0.82 | -1.7 |
868,744 | + | glpF | MCAODC_04270 | 0.87 | +0.4 |
868,744 | + | glpF | MCAODC_04270 | 0.87 | -0.6 |
868,744 | + | glpF | MCAODC_04270 | 0.87 | +0.6 |
868,744 | + | glpF | MCAODC_04270 | 0.87 | +2.2 |
868,745 | - | glpF | MCAODC_04270 | 0.87 | +2.2 |
868,794 | - | -1.2 | |||
868,852 | - | +0.2 | |||
868,852 | - | +0.8 | |||
868,854 | + | +0.4 | |||
868,854 | + | -0.7 | |||
868,854 | + | +0.0 | |||
868,854 | + | +0.4 | |||
868,854 | + | -1.1 | |||
868,855 | - | +0.4 | |||
868,855 | - | +0.2 | |||
868,855 | - | +0.9 | |||
868,855 | - | +0.7 | |||
868,860 | + | -0.3 | |||
868,871 | + | +1.6 | |||
868,871 | + | -0.7 | |||
868,872 | - | -1.4 | |||
868,872 | - | +2.8 | |||
868,893 | + | -0.6 | |||
868,956 | + | +1.0 | |||
868,956 | + | -0.1 | |||
868,957 | - | -1.2 | |||
868,957 | - | -0.3 | |||
869,012 | + | +1.7 | |||
869,013 | - | +1.4 | |||
869,060 | + | glpK | MCAODC_04275 | 0.12 | +1.3 |
869,116 | - | glpK | MCAODC_04275 | 0.16 | +0.5 |
869,137 | - | glpK | MCAODC_04275 | 0.17 | +1.1 |
869,166 | + | glpK | MCAODC_04275 | 0.19 | +0.4 |
869,166 | + | glpK | MCAODC_04275 | 0.19 | +1.5 |
869,166 | + | glpK | MCAODC_04275 | 0.19 | +1.8 |
869,166 | + | glpK | MCAODC_04275 | 0.19 | +1.3 |
869,166 | + | glpK | MCAODC_04275 | 0.19 | -0.4 |
869,170 | + | glpK | MCAODC_04275 | 0.19 | -0.6 |
869,170 | + | glpK | MCAODC_04275 | 0.19 | +1.3 |
869,170 | + | glpK | MCAODC_04275 | 0.19 | +0.7 |
869,170 | + | glpK | MCAODC_04275 | 0.19 | -1.3 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +2.1 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +2.1 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | -0.4 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +1.0 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +0.8 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +0.2 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | -0.3 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | -1.6 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | +1.3 |
869,171 | - | glpK | MCAODC_04275 | 0.20 | -1.1 |
869,199 | + | glpK | MCAODC_04275 | 0.21 | +1.7 |
869,223 | - | glpK | MCAODC_04275 | 0.23 | +0.6 |
869,245 | + | glpK | MCAODC_04275 | 0.24 | +1.3 |
869,245 | + | glpK | MCAODC_04275 | 0.24 | +1.3 |
869,245 | + | glpK | MCAODC_04275 | 0.24 | +0.1 |
869,245 | + | glpK | MCAODC_04275 | 0.24 | +0.6 |
869,245 | + | glpK | MCAODC_04275 | 0.24 | +0.8 |
869,246 | - | glpK | MCAODC_04275 | 0.25 | -0.4 |
869,246 | - | glpK | MCAODC_04275 | 0.25 | +0.7 |
869,246 | - | glpK | MCAODC_04275 | 0.25 | +0.8 |
869,247 | + | glpK | MCAODC_04275 | 0.25 | -0.3 |
869,247 | + | glpK | MCAODC_04275 | 0.25 | -1.0 |
869,376 | + | glpK | MCAODC_04275 | 0.33 | +0.1 |
869,376 | + | glpK | MCAODC_04275 | 0.33 | +1.3 |
869,426 | - | glpK | MCAODC_04275 | 0.36 | +0.2 |
869,443 | - | glpK | MCAODC_04275 | 0.38 | -0.1 |
869,463 | + | glpK | MCAODC_04275 | 0.39 | -2.7 |
869,463 | + | glpK | MCAODC_04275 | 0.39 | +0.1 |
869,464 | - | glpK | MCAODC_04275 | 0.39 | -1.2 |
869,503 | - | glpK | MCAODC_04275 | 0.42 | +1.8 |
869,548 | + | glpK | MCAODC_04275 | 0.45 | +1.9 |
869,548 | + | glpK | MCAODC_04275 | 0.45 | -0.2 |
869,548 | + | glpK | MCAODC_04275 | 0.45 | +0.7 |
869,586 | + | glpK | MCAODC_04275 | 0.47 | +0.9 |
869,671 | + | glpK | MCAODC_04275 | 0.53 | +0.0 |
869,671 | + | glpK | MCAODC_04275 | 0.53 | -1.0 |
869,671 | + | glpK | MCAODC_04275 | 0.53 | -0.0 |
869,672 | - | glpK | MCAODC_04275 | 0.53 | +0.3 |
869,672 | - | glpK | MCAODC_04275 | 0.53 | +0.9 |
869,672 | - | glpK | MCAODC_04275 | 0.53 | +0.5 |
869,672 | - | glpK | MCAODC_04275 | 0.53 | +1.2 |
869,688 | + | glpK | MCAODC_04275 | 0.54 | +0.9 |
869,688 | + | glpK | MCAODC_04275 | 0.54 | -2.0 |
869,689 | - | glpK | MCAODC_04275 | 0.54 | +2.2 |
869,689 | - | glpK | MCAODC_04275 | 0.54 | +1.1 |
869,776 | + | glpK | MCAODC_04275 | 0.60 | +1.0 |
869,776 | + | glpK | MCAODC_04275 | 0.60 | +1.4 |
869,776 | + | glpK | MCAODC_04275 | 0.60 | +0.2 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | -1.4 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | +1.4 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | +0.3 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | +2.0 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | -2.8 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | -1.1 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | -1.2 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | +1.1 |
869,777 | - | glpK | MCAODC_04275 | 0.60 | -1.4 |
869,858 | - | glpK | MCAODC_04275 | 0.65 | +0.9 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +0.3 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | -0.8 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +1.1 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +3.7 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +0.3 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +0.3 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | -0.6 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +0.6 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | -1.1 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +1.3 |
869,905 | + | glpK | MCAODC_04275 | 0.68 | +1.4 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +0.1 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +1.9 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +1.2 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +0.7 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | -0.5 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +0.3 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | +1.3 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | -0.8 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | -0.2 |
869,906 | - | glpK | MCAODC_04275 | 0.68 | -0.2 |
869,922 | + | glpK | MCAODC_04275 | 0.69 | +0.0 |
869,942 | - | glpK | MCAODC_04275 | 0.71 | -2.3 |
870,006 | + | glpK | MCAODC_04275 | 0.75 | +0.7 |
870,006 | + | glpK | MCAODC_04275 | 0.75 | +0.3 |
870,007 | - | glpK | MCAODC_04275 | 0.75 | +0.6 |
870,007 | - | glpK | MCAODC_04275 | 0.75 | +1.1 |
870,009 | - | glpK | MCAODC_04275 | 0.75 | +0.5 |
870,027 | + | glpK | MCAODC_04275 | 0.76 | -0.3 |
870,027 | + | glpK | MCAODC_04275 | 0.76 | +0.3 |
870,028 | - | glpK | MCAODC_04275 | 0.76 | +0.7 |
870,028 | - | glpK | MCAODC_04275 | 0.76 | +0.9 |
870,028 | - | glpK | MCAODC_04275 | 0.76 | -0.1 |
870,028 | - | glpK | MCAODC_04275 | 0.76 | +0.9 |
870,211 | + | glpK | MCAODC_04275 | 0.88 | +0.5 |
870,315 | + | +0.8 | |||
870,315 | + | +0.9 | |||
870,315 | + | +1.2 | |||
870,315 | + | +1.0 | |||
870,316 | - | +1.1 | |||
870,316 | - | +2.5 | |||
870,316 | - | -0.3 | |||
870,316 | - | -0.5 | |||
870,383 | - | -0.4 | |||
870,435 | + | +0.1 | |||
870,444 | + | +0.7 | |||
870,485 | - | -2.6 | |||
870,577 | + | +2.0 | |||
870,577 | + | +0.1 | |||
870,577 | + | +0.4 | |||
870,578 | - | -2.1 | |||
870,597 | - | +0.5 | |||
870,604 | - | -0.1 | |||
870,613 | + | -0.0 | |||
870,736 | + | glpX | MCAODC_04280 | 0.12 | +1.9 |
870,736 | + | glpX | MCAODC_04280 | 0.12 | -2.0 |
870,736 | + | glpX | MCAODC_04280 | 0.12 | -0.8 |
870,736 | + | glpX | MCAODC_04280 | 0.12 | -0.5 |
870,736 | + | glpX | MCAODC_04280 | 0.12 | -0.5 |
870,737 | - | glpX | MCAODC_04280 | 0.12 | +0.2 |
870,737 | - | glpX | MCAODC_04280 | 0.12 | -0.4 |
870,737 | - | glpX | MCAODC_04280 | 0.12 | -0.0 |
870,739 | + | glpX | MCAODC_04280 | 0.12 | +0.8 |
870,739 | + | glpX | MCAODC_04280 | 0.12 | -0.1 |
870,740 | - | glpX | MCAODC_04280 | 0.12 | -0.5 |
870,740 | - | glpX | MCAODC_04280 | 0.12 | +0.2 |
870,812 | + | glpX | MCAODC_04280 | 0.20 | +1.4 |
870,812 | + | glpX | MCAODC_04280 | 0.20 | -0.9 |
870,812 | + | glpX | MCAODC_04280 | 0.20 | +0.3 |
870,812 | + | glpX | MCAODC_04280 | 0.20 | +0.9 |
870,813 | - | glpX | MCAODC_04280 | 0.20 | +1.0 |
870,813 | - | glpX | MCAODC_04280 | 0.20 | -1.4 |
870,813 | - | glpX | MCAODC_04280 | 0.20 | -0.4 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | -0.3 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | +0.2 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | +1.4 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | -1.3 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | +0.4 |
870,856 | + | glpX | MCAODC_04280 | 0.24 | -0.4 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | +0.7 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -2.2 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | +1.1 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -0.9 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | +0.9 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -0.2 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -0.4 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | +1.9 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -1.6 |
870,857 | - | glpX | MCAODC_04280 | 0.24 | -1.4 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | +1.6 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | +0.1 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | +1.6 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | -0.9 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | +0.2 |
870,964 | + | glpX | MCAODC_04280 | 0.35 | +0.1 |
870,965 | - | glpX | MCAODC_04280 | 0.35 | -0.7 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.1 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +1.3 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +3.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.9 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.1 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.9 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +1.0 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.0 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.2 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.0 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -1.3 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.2 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -0.8 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.8 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.2 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.6 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +1.9 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | +0.7 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -1.0 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -1.4 |
870,968 | + | glpX | MCAODC_04280 | 0.35 | -1.5 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.5 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.9 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.4 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -0.2 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +2.3 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.0 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.5 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +1.6 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +1.1 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.4 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +1.2 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -0.6 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +1.0 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | +0.7 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -0.5 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -0.2 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -0.5 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -2.9 |
870,969 | - | glpX | MCAODC_04280 | 0.35 | -1.2 |
870,971 | - | glpX | MCAODC_04280 | 0.35 | +0.4 |
870,971 | - | glpX | MCAODC_04280 | 0.35 | +0.0 |
871,103 | - | glpX | MCAODC_04280 | 0.48 | +0.5 |
871,155 | + | glpX | MCAODC_04280 | 0.54 | +1.7 |
871,156 | - | glpX | MCAODC_04280 | 0.54 | +1.6 |
871,201 | + | glpX | MCAODC_04280 | 0.58 | +0.2 |
871,201 | + | glpX | MCAODC_04280 | 0.58 | -1.7 |
871,230 | - | glpX | MCAODC_04280 | 0.61 | -1.4 |
871,230 | - | glpX | MCAODC_04280 | 0.61 | +1.0 |
871,284 | + | glpX | MCAODC_04280 | 0.66 | -0.4 |
871,284 | + | glpX | MCAODC_04280 | 0.66 | +0.7 |
871,284 | + | glpX | MCAODC_04280 | 0.66 | -0.6 |
871,285 | - | glpX | MCAODC_04280 | 0.66 | -0.0 |
871,285 | - | glpX | MCAODC_04280 | 0.66 | +0.8 |
871,285 | - | glpX | MCAODC_04280 | 0.66 | -1.7 |
871,285 | - | glpX | MCAODC_04280 | 0.66 | +0.0 |
Or see this region's nucleotide sequence