Experiment: Control_ECRC101
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MCAODC_04260 and zapB are separated by 38 nucleotides zapB and glpF are separated by 431 nucleotides glpF and glpK are separated by 22 nucleotides
MCAODC_04260: MCAODC_04260 - hypothetical protein, at 866,672 to 867,298
_04260
MCAODC_04265: zapB - septal ring assembly protein ZapB, at 867,337 to 867,576
zapB
MCAODC_04270: glpF - glycerol uptake facilitator protein GlpF, at 868,008 to 868,853
glpF
MCAODC_04275: glpK - glycerol kinase GlpK, at 868,876 to 870,384
glpK
Position (kb) 868
869 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 867.008 kb on - strand, within MCAODC_04260 at 867.008 kb on - strand, within MCAODC_04260 at 867.008 kb on - strand, within MCAODC_04260 at 867.033 kb on + strand, within MCAODC_04260 at 867.068 kb on + strand, within MCAODC_04260 at 867.068 kb on + strand, within MCAODC_04260 at 867.100 kb on + strand, within MCAODC_04260 at 867.101 kb on - strand, within MCAODC_04260 at 867.101 kb on - strand, within MCAODC_04260 at 867.101 kb on - strand, within MCAODC_04260 at 867.121 kb on + strand, within MCAODC_04260 at 867.121 kb on + strand, within MCAODC_04260 at 867.121 kb on + strand, within MCAODC_04260 at 867.122 kb on - strand, within MCAODC_04260 at 867.122 kb on - strand, within MCAODC_04260 at 867.122 kb on - strand, within MCAODC_04260 at 867.125 kb on + strand, within MCAODC_04260 at 867.142 kb on - strand, within MCAODC_04260 at 867.180 kb on - strand, within MCAODC_04260 at 867.220 kb on - strand, within MCAODC_04260 at 867.232 kb on + strand, within MCAODC_04260 at 867.233 kb on - strand, within MCAODC_04260 at 867.241 kb on + strand at 867.241 kb on + strand at 867.242 kb on - strand at 867.242 kb on - strand at 867.242 kb on - strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.268 kb on + strand at 867.269 kb on - strand at 867.269 kb on - strand at 867.269 kb on - strand at 867.269 kb on - strand at 867.269 kb on - strand at 867.269 kb on - strand at 867.287 kb on - strand at 867.287 kb on - strand at 867.338 kb on + strand at 867.338 kb on + strand at 867.339 kb on - strand at 867.539 kb on - strand, within zapB at 867.568 kb on + strand at 867.569 kb on - strand at 867.569 kb on - strand at 867.569 kb on - strand at 867.569 kb on - strand at 867.582 kb on + strand at 867.582 kb on + strand at 867.582 kb on + strand at 867.582 kb on + strand at 867.583 kb on - strand at 867.583 kb on - strand at 867.583 kb on - strand at 867.647 kb on + strand at 867.650 kb on + strand at 867.650 kb on + strand at 867.650 kb on + strand at 867.651 kb on - strand at 867.651 kb on - strand at 867.651 kb on - strand at 867.654 kb on + strand at 867.654 kb on + strand at 867.668 kb on - strand at 867.672 kb on - strand at 867.683 kb on + strand at 867.684 kb on - strand at 867.684 kb on - strand at 867.764 kb on + strand at 867.765 kb on - strand at 867.787 kb on + strand at 867.891 kb on - strand at 867.942 kb on + strand at 867.943 kb on - strand at 867.976 kb on + strand at 867.976 kb on + strand at 867.976 kb on + strand at 867.977 kb on - strand at 867.977 kb on - strand at 867.977 kb on - strand at 867.977 kb on - strand at 867.977 kb on - strand at 867.988 kb on + strand at 867.989 kb on - strand at 868.008 kb on - strand at 868.102 kb on + strand, within glpF at 868.103 kb on - strand, within glpF at 868.103 kb on - strand, within glpF at 868.176 kb on + strand, within glpF at 868.176 kb on + strand, within glpF at 868.176 kb on + strand, within glpF at 868.209 kb on - strand, within glpF at 868.220 kb on + strand, within glpF at 868.221 kb on - strand, within glpF at 868.274 kb on + strand, within glpF at 868.316 kb on - strand, within glpF at 868.329 kb on + strand, within glpF at 868.332 kb on + strand, within glpF at 868.332 kb on + strand, within glpF at 868.415 kb on + strand, within glpF at 868.416 kb on - strand, within glpF at 868.419 kb on + strand, within glpF at 868.419 kb on + strand, within glpF at 868.419 kb on + strand, within glpF at 868.420 kb on - strand, within glpF at 868.420 kb on - strand, within glpF at 868.586 kb on + strand, within glpF at 868.586 kb on + strand, within glpF at 868.586 kb on + strand, within glpF at 868.586 kb on + strand, within glpF at 868.587 kb on - strand, within glpF at 868.587 kb on - strand, within glpF at 868.587 kb on - strand, within glpF at 868.587 kb on - strand, within glpF at 868.701 kb on + strand, within glpF at 868.702 kb on - strand, within glpF at 868.702 kb on - strand, within glpF at 868.702 kb on - strand, within glpF at 868.744 kb on + strand, within glpF at 868.744 kb on + strand, within glpF at 868.744 kb on + strand, within glpF at 868.744 kb on + strand, within glpF at 868.745 kb on - strand, within glpF at 868.794 kb on - strand at 868.852 kb on - strand at 868.852 kb on - strand at 868.854 kb on + strand at 868.854 kb on + strand at 868.854 kb on + strand at 868.854 kb on + strand at 868.854 kb on + strand at 868.855 kb on - strand at 868.855 kb on - strand at 868.855 kb on - strand at 868.855 kb on - strand at 868.860 kb on + strand at 868.871 kb on + strand at 868.871 kb on + strand at 868.872 kb on - strand at 868.872 kb on - strand at 868.893 kb on + strand at 868.956 kb on + strand at 868.956 kb on + strand at 868.957 kb on - strand at 868.957 kb on - strand at 869.012 kb on + strand at 869.013 kb on - strand at 869.060 kb on + strand, within glpK at 869.116 kb on - strand, within glpK at 869.137 kb on - strand, within glpK at 869.166 kb on + strand, within glpK at 869.166 kb on + strand, within glpK at 869.166 kb on + strand, within glpK at 869.166 kb on + strand, within glpK at 869.166 kb on + strand, within glpK at 869.170 kb on + strand, within glpK at 869.170 kb on + strand, within glpK at 869.170 kb on + strand, within glpK at 869.170 kb on + strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.171 kb on - strand, within glpK at 869.199 kb on + strand, within glpK at 869.223 kb on - strand, within glpK at 869.245 kb on + strand, within glpK at 869.245 kb on + strand, within glpK at 869.245 kb on + strand, within glpK at 869.245 kb on + strand, within glpK at 869.245 kb on + strand, within glpK at 869.246 kb on - strand, within glpK at 869.246 kb on - strand, within glpK at 869.246 kb on - strand, within glpK at 869.247 kb on + strand, within glpK at 869.247 kb on + strand, within glpK at 869.376 kb on + strand, within glpK at 869.376 kb on + strand, within glpK at 869.426 kb on - strand, within glpK at 869.443 kb on - strand, within glpK at 869.463 kb on + strand, within glpK at 869.463 kb on + strand, within glpK at 869.464 kb on - strand, within glpK at 869.503 kb on - strand, within glpK at 869.548 kb on + strand, within glpK at 869.548 kb on + strand, within glpK at 869.548 kb on + strand, within glpK at 869.586 kb on + strand, within glpK at 869.671 kb on + strand, within glpK at 869.671 kb on + strand, within glpK at 869.671 kb on + strand, within glpK at 869.672 kb on - strand, within glpK at 869.672 kb on - strand, within glpK at 869.672 kb on - strand, within glpK at 869.672 kb on - strand, within glpK at 869.688 kb on + strand, within glpK at 869.688 kb on + strand, within glpK at 869.689 kb on - strand, within glpK at 869.689 kb on - strand, within glpK at 869.776 kb on + strand, within glpK at 869.776 kb on + strand, within glpK at 869.776 kb on + strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK at 869.777 kb on - strand, within glpK
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101 remove 867,008 - MCAODC_04260 0.54 -0.4 867,008 - MCAODC_04260 0.54 +1.2 867,008 - MCAODC_04260 0.54 +0.3 867,033 + MCAODC_04260 0.58 +0.2 867,068 + MCAODC_04260 0.63 -0.8 867,068 + MCAODC_04260 0.63 +0.0 867,100 + MCAODC_04260 0.68 -0.0 867,101 - MCAODC_04260 0.68 -0.1 867,101 - MCAODC_04260 0.68 +0.1 867,101 - MCAODC_04260 0.68 +0.1 867,121 + MCAODC_04260 0.72 +0.4 867,121 + MCAODC_04260 0.72 -1.0 867,121 + MCAODC_04260 0.72 -0.7 867,122 - MCAODC_04260 0.72 +0.0 867,122 - MCAODC_04260 0.72 -0.1 867,122 - MCAODC_04260 0.72 -1.0 867,125 + MCAODC_04260 0.72 -0.8 867,142 - MCAODC_04260 0.75 -0.8 867,180 - MCAODC_04260 0.81 +0.3 867,220 - MCAODC_04260 0.87 -0.9 867,232 + MCAODC_04260 0.89 +0.4 867,233 - MCAODC_04260 0.89 +0.0 867,241 + +1.8 867,241 + +0.4 867,242 - -0.8 867,242 - +1.0 867,242 - -0.8 867,268 + -1.2 867,268 + +0.7 867,268 + +0.4 867,268 + +0.1 867,268 + -0.7 867,268 + +0.7 867,268 + +0.6 867,268 + -0.6 867,268 + +0.0 867,268 + -0.2 867,269 - -1.0 867,269 - -0.8 867,269 - +0.5 867,269 - +0.6 867,269 - +0.8 867,269 - +1.8 867,287 - -0.7 867,287 - -0.7 867,338 + +1.3 867,338 + +0.7 867,339 - -0.2 867,539 - zapB MCAODC_04265 0.84 +0.3 867,568 + -1.0 867,569 - -0.4 867,569 - -0.3 867,569 - +0.7 867,569 - -0.6 867,582 + -1.5 867,582 + +0.9 867,582 + -0.9 867,582 + -3.8 867,583 - -0.3 867,583 - +0.9 867,583 - -0.7 867,647 + -0.1 867,650 + +0.1 867,650 + +0.5 867,650 + -0.8 867,651 - -2.2 867,651 - +0.7 867,651 - +0.7 867,654 + +1.0 867,654 + -1.5 867,668 - -0.3 867,672 - -0.9 867,683 + -1.0 867,684 - -0.1 867,684 - -0.1 867,764 + +0.0 867,765 - -0.4 867,787 + +0.0 867,891 - +1.8 867,942 + -0.3 867,943 - +1.2 867,976 + +0.4 867,976 + -0.1 867,976 + -0.1 867,977 - -0.1 867,977 - +0.1 867,977 - +0.5 867,977 - -0.7 867,977 - -0.9 867,988 + -0.2 867,989 - +0.8 868,008 - +0.7 868,102 + glpF MCAODC_04270 0.11 +0.1 868,103 - glpF MCAODC_04270 0.11 -0.1 868,103 - glpF MCAODC_04270 0.11 +0.4 868,176 + glpF MCAODC_04270 0.20 -1.4 868,176 + glpF MCAODC_04270 0.20 +0.8 868,176 + glpF MCAODC_04270 0.20 -2.1 868,209 - glpF MCAODC_04270 0.24 +0.6 868,220 + glpF MCAODC_04270 0.25 -1.1 868,221 - glpF MCAODC_04270 0.25 +1.0 868,274 + glpF MCAODC_04270 0.31 -0.9 868,316 - glpF MCAODC_04270 0.36 +0.1 868,329 + glpF MCAODC_04270 0.38 +1.0 868,332 + glpF MCAODC_04270 0.38 -0.1 868,332 + glpF MCAODC_04270 0.38 +1.4 868,415 + glpF MCAODC_04270 0.48 +1.3 868,416 - glpF MCAODC_04270 0.48 +1.7 868,419 + glpF MCAODC_04270 0.49 -0.2 868,419 + glpF MCAODC_04270 0.49 +2.4 868,419 + glpF MCAODC_04270 0.49 +1.1 868,420 - glpF MCAODC_04270 0.49 +3.2 868,420 - glpF MCAODC_04270 0.49 -0.7 868,586 + glpF MCAODC_04270 0.68 -0.0 868,586 + glpF MCAODC_04270 0.68 +1.2 868,586 + glpF MCAODC_04270 0.68 +0.9 868,586 + glpF MCAODC_04270 0.68 +0.7 868,587 - glpF MCAODC_04270 0.68 +0.7 868,587 - glpF MCAODC_04270 0.68 +0.6 868,587 - glpF MCAODC_04270 0.68 -0.1 868,587 - glpF MCAODC_04270 0.68 +1.2 868,701 + glpF MCAODC_04270 0.82 +0.5 868,702 - glpF MCAODC_04270 0.82 -0.1 868,702 - glpF MCAODC_04270 0.82 +1.0 868,702 - glpF MCAODC_04270 0.82 -1.7 868,744 + glpF MCAODC_04270 0.87 +0.4 868,744 + glpF MCAODC_04270 0.87 -0.6 868,744 + glpF MCAODC_04270 0.87 +0.6 868,744 + glpF MCAODC_04270 0.87 +2.2 868,745 - glpF MCAODC_04270 0.87 +2.2 868,794 - -1.2 868,852 - +0.2 868,852 - +0.8 868,854 + +0.4 868,854 + -0.7 868,854 + +0.0 868,854 + +0.4 868,854 + -1.1 868,855 - +0.4 868,855 - +0.2 868,855 - +0.9 868,855 - +0.7 868,860 + -0.3 868,871 + +1.6 868,871 + -0.7 868,872 - -1.4 868,872 - +2.8 868,893 + -0.6 868,956 + +1.0 868,956 + -0.1 868,957 - -1.2 868,957 - -0.3 869,012 + +1.7 869,013 - +1.4 869,060 + glpK MCAODC_04275 0.12 +1.3 869,116 - glpK MCAODC_04275 0.16 +0.5 869,137 - glpK MCAODC_04275 0.17 +1.1 869,166 + glpK MCAODC_04275 0.19 +0.4 869,166 + glpK MCAODC_04275 0.19 +1.5 869,166 + glpK MCAODC_04275 0.19 +1.8 869,166 + glpK MCAODC_04275 0.19 +1.3 869,166 + glpK MCAODC_04275 0.19 -0.4 869,170 + glpK MCAODC_04275 0.19 -0.6 869,170 + glpK MCAODC_04275 0.19 +1.3 869,170 + glpK MCAODC_04275 0.19 +0.7 869,170 + glpK MCAODC_04275 0.19 -1.3 869,171 - glpK MCAODC_04275 0.20 +2.1 869,171 - glpK MCAODC_04275 0.20 +2.1 869,171 - glpK MCAODC_04275 0.20 -0.4 869,171 - glpK MCAODC_04275 0.20 +1.0 869,171 - glpK MCAODC_04275 0.20 +0.8 869,171 - glpK MCAODC_04275 0.20 +0.2 869,171 - glpK MCAODC_04275 0.20 -0.3 869,171 - glpK MCAODC_04275 0.20 -1.6 869,171 - glpK MCAODC_04275 0.20 +1.3 869,171 - glpK MCAODC_04275 0.20 -1.1 869,199 + glpK MCAODC_04275 0.21 +1.7 869,223 - glpK MCAODC_04275 0.23 +0.6 869,245 + glpK MCAODC_04275 0.24 +1.3 869,245 + glpK MCAODC_04275 0.24 +1.3 869,245 + glpK MCAODC_04275 0.24 +0.1 869,245 + glpK MCAODC_04275 0.24 +0.6 869,245 + glpK MCAODC_04275 0.24 +0.8 869,246 - glpK MCAODC_04275 0.25 -0.4 869,246 - glpK MCAODC_04275 0.25 +0.7 869,246 - glpK MCAODC_04275 0.25 +0.8 869,247 + glpK MCAODC_04275 0.25 -0.3 869,247 + glpK MCAODC_04275 0.25 -1.0 869,376 + glpK MCAODC_04275 0.33 +0.1 869,376 + glpK MCAODC_04275 0.33 +1.3 869,426 - glpK MCAODC_04275 0.36 +0.2 869,443 - glpK MCAODC_04275 0.38 -0.1 869,463 + glpK MCAODC_04275 0.39 -2.7 869,463 + glpK MCAODC_04275 0.39 +0.1 869,464 - glpK MCAODC_04275 0.39 -1.2 869,503 - glpK MCAODC_04275 0.42 +1.8 869,548 + glpK MCAODC_04275 0.45 +1.9 869,548 + glpK MCAODC_04275 0.45 -0.2 869,548 + glpK MCAODC_04275 0.45 +0.7 869,586 + glpK MCAODC_04275 0.47 +0.9 869,671 + glpK MCAODC_04275 0.53 +0.0 869,671 + glpK MCAODC_04275 0.53 -1.0 869,671 + glpK MCAODC_04275 0.53 -0.0 869,672 - glpK MCAODC_04275 0.53 +0.3 869,672 - glpK MCAODC_04275 0.53 +0.9 869,672 - glpK MCAODC_04275 0.53 +0.5 869,672 - glpK MCAODC_04275 0.53 +1.2 869,688 + glpK MCAODC_04275 0.54 +0.9 869,688 + glpK MCAODC_04275 0.54 -2.0 869,689 - glpK MCAODC_04275 0.54 +2.2 869,689 - glpK MCAODC_04275 0.54 +1.1 869,776 + glpK MCAODC_04275 0.60 +1.0 869,776 + glpK MCAODC_04275 0.60 +1.4 869,776 + glpK MCAODC_04275 0.60 +0.2 869,777 - glpK MCAODC_04275 0.60 -1.4 869,777 - glpK MCAODC_04275 0.60 +1.4 869,777 - glpK MCAODC_04275 0.60 +0.3 869,777 - glpK MCAODC_04275 0.60 +2.0 869,777 - glpK MCAODC_04275 0.60 -2.8 869,777 - glpK MCAODC_04275 0.60 -1.1 869,777 - glpK MCAODC_04275 0.60 -1.2 869,777 - glpK MCAODC_04275 0.60 +1.1 869,777 - glpK MCAODC_04275 0.60 -1.4
Or see this region's nucleotide sequence