Strain Fitness in Escherichia coli ECRC98 around JDDGAC_06620

Experiment: Bas36

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas36
1,152,704	+	rluE	JDDGAC_06610	0.33	-2.1
1,152,704	+	rluE	JDDGAC_06610	0.33	-0.8
1,152,812	+	rluE	JDDGAC_06610	0.50	-0.3
1,152,812	+	rluE	JDDGAC_06610	0.50	-0.7
1,152,815	+	rluE	JDDGAC_06610	0.50	-0.7
1,152,815	+	rluE	JDDGAC_06610	0.50	+1.3
1,152,815	+	rluE	JDDGAC_06610	0.50	+0.6
1,152,880	-	rluE	JDDGAC_06610	0.60	+2.3
1,153,002	+	rluE	JDDGAC_06610	0.79	-0.2
1,153,002	+	rluE	JDDGAC_06610	0.79	+0.5
1,153,003	-	rluE	JDDGAC_06610	0.79	-2.0
1,153,003	-	rluE	JDDGAC_06610	0.79	+2.1
1,153,003	-	rluE	JDDGAC_06610	0.79	-2.2
1,153,004	+	rluE	JDDGAC_06610	0.79	-0.1
1,153,004	+	rluE	JDDGAC_06610	0.79	-0.5
1,153,004	+	rluE	JDDGAC_06610	0.79	+2.7
1,153,004	+	rluE	JDDGAC_06610	0.79	-1.2
1,153,092	-				-2.1
1,153,139	+				-1.6
1,153,139	+				+0.4
1,153,351	+	nudJ	JDDGAC_06615	0.43	-1.5
1,153,529	-	nudJ	JDDGAC_06615	0.82	-0.9
1,153,529	-	nudJ	JDDGAC_06615	0.82	+1.1
1,154,032	+	mnmA	JDDGAC_06620	0.33	-0.3
1,154,123	-	mnmA	JDDGAC_06620	0.41	-0.2
1,154,575	-	mnmA	JDDGAC_06620	0.82	-2.6
1,154,710	+				-1.5
1,154,774	+				-0.8
1,154,777	+				+1.9
1,154,787	+				-3.4
1,154,933	+	hflD	JDDGAC_06625	0.19	+0.3
1,154,934	-	hflD	JDDGAC_06625	0.20	-2.3
1,154,942	+	hflD	JDDGAC_06625	0.21	+2.7
1,155,049	+	hflD	JDDGAC_06625	0.38	+2.9
1,155,215	+	hflD	JDDGAC_06625	0.63	-0.5
1,155,219	+	hflD	JDDGAC_06625	0.64	+1.4
1,155,219	+	hflD	JDDGAC_06625	0.64	-1.2
1,155,219	+	hflD	JDDGAC_06625	0.64	+0.7
1,155,393	-				+1.8
1,155,433	+				-0.5