Strain Fitness in Pseudomonas sp. RS175 around PFR28_02972

Experiment: L-Isoleucine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C) 10 mM
3,476,068	+		PFR28_02970	0.19	+0.1
3,476,068	+		PFR28_02970	0.19	-0.8
3,476,069	-		PFR28_02970	0.19	+0.1
3,476,069	-		PFR28_02970	0.19	+0.6
3,476,161	+		PFR28_02970	0.34	-0.6
3,476,211	+		PFR28_02970	0.42	-0.6
3,476,211	+		PFR28_02970	0.42	+0.2
3,476,212	-		PFR28_02970	0.42	+0.4
3,476,275	+		PFR28_02970	0.53	-1.2
3,476,275	+		PFR28_02970	0.53	+0.1
3,476,275	+		PFR28_02970	0.53	-1.6
3,476,275	+		PFR28_02970	0.53	-0.3
3,476,275	+		PFR28_02970	0.53	+1.7
3,476,275	+		PFR28_02970	0.53	-1.2
3,476,275	+		PFR28_02970	0.53	-1.8
3,476,276	-		PFR28_02970	0.53	+0.7
3,476,276	-		PFR28_02970	0.53	+1.0
3,476,276	-		PFR28_02970	0.53	-0.1
3,476,276	-		PFR28_02970	0.53	+0.6
3,476,276	-		PFR28_02970	0.53	-0.8
3,476,276	-		PFR28_02970	0.53	+0.2
3,476,276	-		PFR28_02970	0.53	+0.4
3,476,373	+		PFR28_02970	0.69	-0.9
3,476,373	+		PFR28_02970	0.69	-1.0
3,476,373	+		PFR28_02970	0.69	-1.5
3,476,373	+		PFR28_02970	0.69	-1.4
3,476,373	+		PFR28_02970	0.69	-0.7
3,476,373	+		PFR28_02970	0.69	+0.0
3,476,374	-		PFR28_02970	0.69	-2.2
3,476,374	-		PFR28_02970	0.69	-0.9
3,476,374	-		PFR28_02970	0.69	-0.4
3,476,414	-		PFR28_02970	0.75	+0.0
3,476,414	-		PFR28_02970	0.75	-0.1
3,476,422	+		PFR28_02970	0.77	+0.2
3,476,422	+		PFR28_02970	0.77	+0.7
3,476,422	+		PFR28_02970	0.77	-1.4
3,476,422	+		PFR28_02970	0.77	+0.2
3,476,422	+		PFR28_02970	0.77	-0.9
3,476,423	-		PFR28_02970	0.77	-0.6
3,476,423	-		PFR28_02970	0.77	-0.6
3,476,423	-		PFR28_02970	0.77	+0.3
3,476,546	+				-0.4
3,476,546	+				+0.9
3,476,546	+				+0.3
3,476,546	+				-2.0
3,476,547	-				-0.2
3,476,547	-				-0.3
3,476,547	-				+0.1
3,476,547	-				-0.2
3,476,565	-				+2.1
3,476,645	-				+0.5
3,476,932	+				+0.1
3,476,933	-				-1.2
3,476,968	+				+0.4
3,476,968	+				-0.0
3,476,968	+				-1.0
3,477,517	+		PFR28_02972	0.88	-0.6
3,477,517	+		PFR28_02972	0.88	-1.1
3,477,517	+		PFR28_02972	0.88	+0.8
3,477,517	+		PFR28_02972	0.88	-0.8
3,477,517	+		PFR28_02972	0.88	+0.1
3,477,518	-		PFR28_02972	0.88	-0.4
3,477,518	-		PFR28_02972	0.88	-0.1
3,477,518	-		PFR28_02972	0.88	-1.1
3,477,518	-		PFR28_02972	0.88	-1.8
3,477,518	-		PFR28_02972	0.88	-0.3
3,477,518	-		PFR28_02972	0.88	+1.5
3,477,521	+		PFR28_02972	0.88	+0.5
3,477,521	+		PFR28_02972	0.88	-0.6
3,477,521	+		PFR28_02972	0.88	-1.6
3,477,521	+		PFR28_02972	0.88	-0.1
3,477,522	-		PFR28_02972	0.89	-0.0
3,477,522	-		PFR28_02972	0.89	+0.2
3,477,522	-		PFR28_02972	0.89	-0.1
3,477,522	-		PFR28_02972	0.89	+0.0
3,477,522	-		PFR28_02972	0.89	+0.4
3,477,522	-		PFR28_02972	0.89	+0.8
3,477,522	-		PFR28_02972	0.89	-0.4
3,477,533	+				-1.2
3,477,533	+				-2.9
3,477,533	+				+0.3
3,477,534	-				-0.2
3,477,534	-				+0.2
3,477,544	+				+0.4
3,477,545	-				-0.7
3,477,748	-				-1.3
3,477,750	+				-1.5
3,477,750	+				-1.0
3,477,750	+				-0.5
3,477,751	-				-1.0
3,477,751	-				-2.3
3,477,816	+		PFR28_02973	0.14	-2.2
3,477,935	+		PFR28_02973	0.22	-2.7
3,477,948	+		PFR28_02973	0.23	-2.1
3,477,949	-		PFR28_02973	0.23	-0.4
3,477,950	+		PFR28_02973	0.23	-0.5
3,477,950	+		PFR28_02973	0.23	-1.4
3,477,950	+		PFR28_02973	0.23	-2.8
3,477,950	+		PFR28_02973	0.23	-1.0
3,477,950	+		PFR28_02973	0.23	-1.9
3,477,950	+		PFR28_02973	0.23	+0.1
3,477,950	+		PFR28_02973	0.23	-2.9
3,477,951	-		PFR28_02973	0.23	-2.8
3,477,951	-		PFR28_02973	0.23	-1.8
3,477,951	-		PFR28_02973	0.23	-0.6
3,477,968	+		PFR28_02973	0.24	-3.5
3,477,986	+		PFR28_02973	0.26	-1.4
3,477,987	-		PFR28_02973	0.26	-0.9
3,478,130	+		PFR28_02973	0.36	-2.7
3,478,130	+		PFR28_02973	0.36	-2.3
3,478,130	+		PFR28_02973	0.36	-2.7
3,478,130	+		PFR28_02973	0.36	-0.1
3,478,130	+		PFR28_02973	0.36	-1.9
3,478,130	+		PFR28_02973	0.36	-1.4
3,478,130	+		PFR28_02973	0.36	-1.7
3,478,130	+		PFR28_02973	0.36	-2.2
3,478,131	-		PFR28_02973	0.36	-2.4
3,478,131	-		PFR28_02973	0.36	-1.4
3,478,131	-		PFR28_02973	0.36	-1.3
3,478,131	-		PFR28_02973	0.36	-1.5
3,478,131	-		PFR28_02973	0.36	-2.1
3,478,131	-		PFR28_02973	0.36	-3.3
3,478,131	-		PFR28_02973	0.36	-1.8
3,478,154	+		PFR28_02973	0.37	-3.7
3,478,154	+		PFR28_02973	0.37	-1.6
3,478,154	+		PFR28_02973	0.37	-2.6
3,478,154	+		PFR28_02973	0.37	-3.0
3,478,155	-		PFR28_02973	0.37	-1.3
3,478,155	-		PFR28_02973	0.37	-1.6
3,478,155	-		PFR28_02973	0.37	-0.7
3,478,155	-		PFR28_02973	0.37	-1.5
3,478,202	+		PFR28_02973	0.41	-0.9
3,478,202	+		PFR28_02973	0.41	-2.8
3,478,202	+		PFR28_02973	0.41	-1.9
3,478,202	+		PFR28_02973	0.41	-2.6
3,478,202	+		PFR28_02973	0.41	-1.4
3,478,202	+		PFR28_02973	0.41	-0.6
3,478,202	+		PFR28_02973	0.41	-1.7
3,478,203	-		PFR28_02973	0.41	-1.5
3,478,203	-		PFR28_02973	0.41	-0.2
3,478,203	-		PFR28_02973	0.41	-0.6
3,478,203	-		PFR28_02973	0.41	+0.1
3,478,203	-		PFR28_02973	0.41	-1.1
3,478,203	-		PFR28_02973	0.41	-1.8
3,478,203	-		PFR28_02973	0.41	-1.2
3,478,203	-		PFR28_02973	0.41	-0.4
3,478,206	+		PFR28_02973	0.41	-0.9
3,478,206	+		PFR28_02973	0.41	-1.1
3,478,206	+		PFR28_02973	0.41	-0.3
3,478,206	+		PFR28_02973	0.41	-2.5
3,478,206	+		PFR28_02973	0.41	-3.6
3,478,206	+		PFR28_02973	0.41	-1.6
3,478,207	-		PFR28_02973	0.41	-0.5
3,478,207	-		PFR28_02973	0.41	-3.3
3,478,207	-		PFR28_02973	0.41	+0.4
3,478,207	-		PFR28_02973	0.41	-1.4
3,478,207	-		PFR28_02973	0.41	-2.4
3,478,316	-		PFR28_02973	0.49	+0.4
3,478,442	+		PFR28_02973	0.57	-1.6
3,478,442	+		PFR28_02973	0.57	-1.3
3,478,442	+		PFR28_02973	0.57	-0.5
3,478,442	+		PFR28_02973	0.57	-1.3
3,478,442	+		PFR28_02973	0.57	-2.7
3,478,442	+		PFR28_02973	0.57	-0.9
3,478,442	+		PFR28_02973	0.57	-1.0
3,478,442	+		PFR28_02973	0.57	-2.9
3,478,443	-		PFR28_02973	0.57	-1.8
3,478,443	-		PFR28_02973	0.57	-1.2
3,478,443	-		PFR28_02973	0.57	-1.1
3,478,443	-		PFR28_02973	0.57	-2.5
3,478,443	-		PFR28_02973	0.57	-0.6
3,478,443	-		PFR28_02973	0.57	-1.0
3,478,443	-		PFR28_02973	0.57	-2.8
3,478,445	+		PFR28_02973	0.57	-2.8
3,478,445	+		PFR28_02973	0.57	-1.7
3,478,445	+		PFR28_02973	0.57	-0.9
3,478,445	+		PFR28_02973	0.57	-1.3
3,478,445	+		PFR28_02973	0.57	-1.4
3,478,445	+		PFR28_02973	0.57	-1.0
3,478,445	+		PFR28_02973	0.57	-2.3
3,478,445	+		PFR28_02973	0.57	-1.3
3,478,445	+		PFR28_02973	0.57	-2.0
3,478,445	+		PFR28_02973	0.57	-2.6
3,478,445	+		PFR28_02973	0.57	-0.5
3,478,445	+		PFR28_02973	0.57	-1.8
3,478,445	+		PFR28_02973	0.57	-1.5
3,478,445	+		PFR28_02973	0.57	-1.4
3,478,446	-		PFR28_02973	0.58	-2.3
3,478,446	-		PFR28_02973	0.58	-0.3
3,478,446	-		PFR28_02973	0.58	-3.3
3,478,446	-		PFR28_02973	0.58	-1.2
3,478,446	-		PFR28_02973	0.58	-0.7
3,478,446	-		PFR28_02973	0.58	-1.9
3,478,446	-		PFR28_02973	0.58	-0.9
3,478,446	-		PFR28_02973	0.58	-1.1
3,478,446	-		PFR28_02973	0.58	-2.6
3,478,446	-		PFR28_02973	0.58	-4.8
3,478,446	-		PFR28_02973	0.58	-0.4
3,478,489	+		PFR28_02973	0.60	-0.9