Strain Fitness in Escherichia coli ECRC98 around JDDGAC_18740

Experiment: WM_TP6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP6
3,570,410	+	yidJ	JDDGAC_18730	0.87	-1.9
3,570,410	+	yidJ	JDDGAC_18730	0.87	+1.1
3,570,410	+	yidJ	JDDGAC_18730	0.87	+0.7
3,570,412	+	yidJ	JDDGAC_18730	0.87	-1.4
3,570,443	+	yidJ	JDDGAC_18730	0.89	-0.0
3,570,537	+				+0.6
3,570,545	+				-0.7
3,570,545	+				-0.9
3,570,686	+				-0.1
3,570,694	-				-0.7
3,570,815	+	yidI	JDDGAC_18735	0.36	+0.8
3,570,815	+	yidI	JDDGAC_18735	0.36	+0.8
3,570,924	+	yidI	JDDGAC_18735	0.61	-1.0
3,570,925	-	yidI	JDDGAC_18735	0.61	+0.0
3,570,947	+	yidI	JDDGAC_18735	0.66	-0.6
3,570,947	+	yidI	JDDGAC_18735	0.66	-0.8
3,571,038	+	yidI	JDDGAC_18735	0.86	-1.2
3,571,056	+				+0.6
3,571,056	+				-0.6
3,571,079	+				-0.4
3,571,080	-				-1.3
3,571,094	+				-0.2
3,571,113	+				-0.2
3,571,113	+				-0.6
3,571,114	-				-0.4
3,571,131	+				+1.2
3,571,132	-				-0.2
3,571,177	+				+0.2
3,571,186	-				+0.9
3,571,260	-	yidH	JDDGAC_18740	0.15	+2.9
3,571,268	+	yidH	JDDGAC_18740	0.17	-2.5
3,571,269	-	yidH	JDDGAC_18740	0.17	-2.6
3,571,297	+	yidH	JDDGAC_18740	0.25	-0.1
3,571,413	+	yidH	JDDGAC_18740	0.59	-1.4
3,571,413	+	yidH	JDDGAC_18740	0.59	-0.4
3,571,414	-	yidH	JDDGAC_18740	0.59	-0.2
3,571,487	-	yidH	JDDGAC_18740	0.80	-1.3
3,571,516	+	yidH	JDDGAC_18740	0.88	-0.4
3,571,545	+				+0.2
3,571,603	-	yidG	JDDGAC_18745	0.16	+0.7
3,571,603	-	yidG	JDDGAC_18745	0.16	+1.3
3,571,603	-	yidG	JDDGAC_18745	0.16	+0.1
3,571,623	+	yidG	JDDGAC_18745	0.21	-0.9
3,571,744	+	yidG	JDDGAC_18745	0.55	+0.1
3,571,745	-	yidG	JDDGAC_18745	0.55	+0.1
3,571,763	+	yidG	JDDGAC_18745	0.60	-1.6
3,571,803	-	yidG	JDDGAC_18745	0.71	-0.1
3,571,838	+	yidG	JDDGAC_18745	0.80	+0.9
3,571,839	-	yidG	JDDGAC_18745	0.81	-0.2
3,571,851	-	yidG	JDDGAC_18745	0.84	-0.2
3,571,851	-	yidG	JDDGAC_18745	0.84	+0.2
3,571,869	+	yidG	JDDGAC_18745	0.89	-1.3
3,571,870	-	yidG	JDDGAC_18745	0.89	-0.1
3,571,870	-	yidG	JDDGAC_18745	0.89	-0.1
3,571,870	-	yidG	JDDGAC_18745	0.89	-0.5
3,571,871	+	yidG	JDDGAC_18745	0.90	-1.5
3,571,871	+	yidG	JDDGAC_18745	0.90	+0.7
3,571,871	+	yidG	JDDGAC_18745	0.90	+0.4
3,571,871	+	yidG	JDDGAC_18745	0.90	+0.6
3,571,872	-				-1.8
3,571,872	-				+0.6
3,571,872	-				-0.1
3,571,872	-				+0.1
3,571,881	+				+0.7
3,571,887	-				+0.2
3,571,890	+				-0.1
3,571,946	+				-2.0
3,571,947	-				-1.9
3,571,957	+		JDDGAC_18750	0.10	-0.0
3,571,993	-		JDDGAC_18750	0.18	+2.1
3,572,067	-		JDDGAC_18750	0.33	-0.1
3,572,145	-		JDDGAC_18750	0.48	+1.5
3,572,313	+		JDDGAC_18750	0.82	-0.2
3,572,313	+		JDDGAC_18750	0.82	-0.1
3,572,314	-		JDDGAC_18750	0.82	+0.7
3,572,314	-		JDDGAC_18750	0.82	-0.6
3,572,320	-		JDDGAC_18750	0.83	-0.0
3,572,412	-				+0.2
3,572,482	+				-0.9