Strain Fitness in Escherichia coli ECRC98 around JDDGAC_10350

Experiment: WM_Bas41

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas41
1,844,650	-	modC	JDDGAC_10340	0.78	+0.4
1,844,703	-	modC	JDDGAC_10340	0.83	-0.1
1,844,703	-	modC	JDDGAC_10340	0.83	+1.7
1,844,837	-				+1.0
1,844,971	-	modC	JDDGAC_10345	0.12	-0.1
1,844,971	-	modC	JDDGAC_10345	0.12	-2.1
1,845,023	+	modC	JDDGAC_10345	0.19	-0.5
1,845,023	+	modC	JDDGAC_10345	0.19	-0.7
1,845,023	+	modC	JDDGAC_10345	0.19	-1.4
1,845,023	+	modC	JDDGAC_10345	0.19	-1.5
1,845,023	+	modC	JDDGAC_10345	0.19	-0.7
1,845,023	+	modC	JDDGAC_10345	0.19	-0.5
1,845,024	-	modC	JDDGAC_10345	0.19	+1.5
1,845,024	-	modC	JDDGAC_10345	0.19	-2.0
1,845,024	-	modC	JDDGAC_10345	0.19	-2.3
1,845,024	-	modC	JDDGAC_10345	0.19	-1.6
1,845,024	-	modC	JDDGAC_10345	0.19	-0.5
1,845,024	-	modC	JDDGAC_10345	0.19	-1.2
1,845,132	+	modC	JDDGAC_10345	0.35	+0.7
1,845,133	-	modC	JDDGAC_10345	0.35	-0.6
1,845,133	-	modC	JDDGAC_10345	0.35	+0.1
1,845,163	-	modC	JDDGAC_10345	0.40	-0.3
1,845,380	-	modC	JDDGAC_10345	0.71	-0.9
1,845,386	-	modC	JDDGAC_10345	0.72	-0.5
1,845,580	+				-1.8
1,845,581	-				-0.3
1,845,581	-				-0.2
1,845,668	+	modA	JDDGAC_10350	0.11	-0.3
1,845,753	-	modA	JDDGAC_10350	0.22	-3.3
1,845,898	+	modA	JDDGAC_10350	0.41	+1.5
1,845,898	+	modA	JDDGAC_10350	0.41	+0.8
1,846,056	-	modA	JDDGAC_10350	0.62	-0.9
1,846,115	+	modA	JDDGAC_10350	0.69	+1.1
1,846,421	+				-0.0
1,846,421	+				+1.2
1,846,441	+				+0.4
1,846,446	-				+0.5
1,846,500	+				+0.0
1,846,634	-	acrZ	JDDGAC_10355	0.77	-3.5
1,846,655	-				+1.1
1,846,658	-				-0.1
1,846,663	+				+0.8
1,846,663	+				+1.1
1,846,682	+				-0.4
1,846,683	-				+0.1
1,846,685	-				-0.1
1,846,697	-				-0.8
1,846,709	-				+1.9
1,846,797	-				-0.6
1,846,932	-	modE	JDDGAC_10360	0.17	+0.8
1,846,969	+	modE	JDDGAC_10360	0.22	-0.9
1,846,970	-	modE	JDDGAC_10360	0.22	+0.7
1,846,979	+	modE	JDDGAC_10360	0.23	+1.1
1,846,980	-	modE	JDDGAC_10360	0.23	+0.2
1,847,246	-	modE	JDDGAC_10360	0.57	+1.7
1,847,341	+	modE	JDDGAC_10360	0.69	+0.6