Strain Fitness in Pseudomonas sp. RS175 around PFR28_02969

Experiment: L-Valine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C) 10 mM
3,474,677	+		PFR28_02967	0.89	-0.7
3,474,677	+		PFR28_02967	0.89	+0.4
3,474,677	+		PFR28_02967	0.89	+0.1
3,474,802	+				-0.2
3,474,803	-				+1.4
3,474,922	+				+0.8
3,474,922	+				-0.3
3,474,922	+				+1.1
3,474,922	+				-2.2
3,474,922	+				-0.3
3,474,923	-				+1.1
3,474,923	-				-1.5
3,474,923	-				+1.5
3,474,923	-				-0.9
3,474,923	-				+0.6
3,474,923	-				-0.7
3,474,955	+				+0.6
3,475,134	+		PFR28_02968	0.32	+0.6
3,475,134	+		PFR28_02968	0.32	+1.3
3,475,134	+		PFR28_02968	0.32	-1.6
3,475,134	+		PFR28_02968	0.32	+0.9
3,475,134	+		PFR28_02968	0.32	-0.2
3,475,134	+		PFR28_02968	0.32	-0.5
3,475,134	+		PFR28_02968	0.32	+0.1
3,475,134	+		PFR28_02968	0.32	+0.2
3,475,134	+		PFR28_02968	0.32	-1.3
3,475,134	+		PFR28_02968	0.32	-0.5
3,475,134	+		PFR28_02968	0.32	+0.6
3,475,135	-		PFR28_02968	0.32	-0.1
3,475,135	-		PFR28_02968	0.32	+0.3
3,475,135	-		PFR28_02968	0.32	-0.4
3,475,135	-		PFR28_02968	0.32	-0.7
3,475,135	-		PFR28_02968	0.32	+0.7
3,475,135	-		PFR28_02968	0.32	+0.6
3,475,135	-		PFR28_02968	0.32	+0.3
3,475,143	+		PFR28_02968	0.35	+0.5
3,475,143	+		PFR28_02968	0.35	+0.9
3,475,143	+		PFR28_02968	0.35	+0.7
3,475,143	+		PFR28_02968	0.35	+0.7
3,475,143	+		PFR28_02968	0.35	-0.4
3,475,143	+		PFR28_02968	0.35	-0.3
3,475,143	+		PFR28_02968	0.35	-0.4
3,475,143	+		PFR28_02968	0.35	+0.1
3,475,144	-		PFR28_02968	0.35	+0.5
3,475,144	-		PFR28_02968	0.35	+1.1
3,475,144	-		PFR28_02968	0.35	+1.8
3,475,144	-		PFR28_02968	0.35	+0.6
3,475,144	-		PFR28_02968	0.35	+0.6
3,475,144	-		PFR28_02968	0.35	+0.1
3,475,269	+		PFR28_02968	0.71	-2.0
3,475,269	+		PFR28_02968	0.71	-1.3
3,475,269	+		PFR28_02968	0.71	+0.4
3,475,270	-		PFR28_02968	0.72	+0.9
3,475,270	-		PFR28_02968	0.72	+0.2
3,475,270	-		PFR28_02968	0.72	-0.1
3,475,353	+				-0.1
3,475,354	-				-1.0
3,475,354	-				-0.0
3,475,393	-				-0.3
3,475,472	+				-1.1
3,475,472	+				-1.7
3,475,472	+				+0.3
3,475,472	+				-2.4
3,475,472	+				+1.1
3,475,473	-				+0.8
3,475,473	-				+1.2
3,475,473	-				+0.7
3,475,473	-				-0.5
3,475,473	-				+0.0
3,475,473	-				-0.4
3,475,473	-				+1.2
3,475,473	-				-1.3
3,475,473	-				-0.3
3,475,473	-				-0.9
3,475,473	-				-0.9
3,475,473	-				-1.1
3,475,493	-				+0.5
3,475,524	+				-0.4
3,475,525	-				+0.3
3,475,583	+				+0.4
3,475,584	-				+1.9
3,475,584	-				+1.1
3,475,584	-				-0.1
3,475,584	-				+0.0
3,475,584	-				-0.1
3,475,586	+				-1.4
3,475,586	+				+0.1
3,475,587	-				-1.9
3,475,587	-				+0.1
3,475,587	-				-0.7
3,475,725	-		PFR28_02969	0.66	-0.2
3,475,725	-		PFR28_02969	0.66	-1.0
3,475,725	-		PFR28_02969	0.66	+1.0
3,475,838	+				-0.1
3,475,839	-				-0.1
3,475,839	-				-1.0
3,475,839	-				-0.4
3,475,844	+				+1.0
3,475,844	+				+0.7
3,475,845	-				-0.3
3,475,863	-				-0.5
3,475,954	+				+0.5
3,475,954	+				+0.5
3,475,954	+				-0.1
3,475,954	+				-0.5
3,475,954	+				+1.1
3,475,954	+				-1.1
3,475,954	+				+1.5
3,475,955	-				-0.9
3,475,955	-				-0.3
3,475,955	-				+0.6
3,475,955	-				-0.5
3,475,991	+				-0.1
3,475,992	-				-0.1
3,475,992	-				-1.3
3,476,037	+		PFR28_02970	0.14	-0.1
3,476,037	+		PFR28_02970	0.14	+0.4
3,476,037	+		PFR28_02970	0.14	+1.8
3,476,037	+		PFR28_02970	0.14	-1.3
3,476,037	+		PFR28_02970	0.14	-1.9
3,476,037	+		PFR28_02970	0.14	-1.1
3,476,037	+		PFR28_02970	0.14	+0.1
3,476,038	-		PFR28_02970	0.14	-1.2
3,476,038	-		PFR28_02970	0.14	-2.0
3,476,038	-		PFR28_02970	0.14	+0.1
3,476,038	-		PFR28_02970	0.14	+1.7
3,476,038	-		PFR28_02970	0.14	-0.6
3,476,038	-		PFR28_02970	0.14	-0.1
3,476,038	-		PFR28_02970	0.14	+0.9
3,476,038	-		PFR28_02970	0.14	-0.9
3,476,038	-		PFR28_02970	0.14	+0.1
3,476,038	-		PFR28_02970	0.14	+1.6
3,476,038	-		PFR28_02970	0.14	-0.8
3,476,038	-		PFR28_02970	0.14	+0.8
3,476,068	+		PFR28_02970	0.19	-1.1
3,476,068	+		PFR28_02970	0.19	-1.1
3,476,069	-		PFR28_02970	0.19	-0.2
3,476,069	-		PFR28_02970	0.19	+0.8
3,476,161	+		PFR28_02970	0.34	+0.5
3,476,211	+		PFR28_02970	0.42	+0.7
3,476,211	+		PFR28_02970	0.42	-2.5
3,476,212	-		PFR28_02970	0.42	+0.8
3,476,275	+		PFR28_02970	0.53	-0.7
3,476,275	+		PFR28_02970	0.53	-2.1
3,476,275	+		PFR28_02970	0.53	-1.5
3,476,275	+		PFR28_02970	0.53	-3.8
3,476,275	+		PFR28_02970	0.53	-1.5
3,476,275	+		PFR28_02970	0.53	-0.9
3,476,275	+		PFR28_02970	0.53	+0.9
3,476,276	-		PFR28_02970	0.53	-2.7
3,476,276	-		PFR28_02970	0.53	+0.8
3,476,276	-		PFR28_02970	0.53	-0.5
3,476,276	-		PFR28_02970	0.53	-0.2
3,476,276	-		PFR28_02970	0.53	-0.0
3,476,276	-		PFR28_02970	0.53	-0.3
3,476,276	-		PFR28_02970	0.53	-0.4
3,476,373	+		PFR28_02970	0.69	-1.8
3,476,373	+		PFR28_02970	0.69	-2.5
3,476,373	+		PFR28_02970	0.69	-1.1
3,476,373	+		PFR28_02970	0.69	+1.7
3,476,373	+		PFR28_02970	0.69	-0.2
3,476,373	+		PFR28_02970	0.69	-0.9
3,476,374	-		PFR28_02970	0.69	-0.3
3,476,374	-		PFR28_02970	0.69	+0.4
3,476,374	-		PFR28_02970	0.69	+0.5
3,476,414	-		PFR28_02970	0.75	-0.4
3,476,414	-		PFR28_02970	0.75	-1.2
3,476,422	+		PFR28_02970	0.77	-1.7
3,476,422	+		PFR28_02970	0.77	+0.0
3,476,422	+		PFR28_02970	0.77	-0.0
3,476,422	+		PFR28_02970	0.77	+0.2
3,476,422	+		PFR28_02970	0.77	+0.0
3,476,423	-		PFR28_02970	0.77	+0.7
3,476,423	-		PFR28_02970	0.77	-0.1
3,476,423	-		PFR28_02970	0.77	+0.1
3,476,546	+				-0.5
3,476,546	+				+1.1
3,476,546	+				+1.6
3,476,546	+				+0.2
3,476,547	-				-0.1
3,476,547	-				+0.6
3,476,547	-				+0.0
3,476,547	-				+1.2
3,476,565	-				+0.1
3,476,645	-				-1.4