Strain Fitness in Escherichia coli ECRC98 around JDDGAC_04110

Experiment: WM_JK32

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntydcL and tehB are separated by 303 nucleotidestehB and tehA overlap by 4 nucleotides JDDGAC_04105: ydcL - Uncharacterized lipoprotein YdcL, at 718,594 to 719,262 ydcL JDDGAC_04110: tehB - tellurite resistance methyltransferase TehB, at 719,566 to 720,159 tehB JDDGAC_04115: tehA - dicarboxylate transporter/tellurite-resistance protein TehA, at 720,156 to 721,148 tehA Position (kb) 719 720 721Strain fitness (log2 ratio) -2 -1 0 1 2at 718.678 kb on - strand, within ydcLat 718.698 kb on + strand, within ydcLat 718.699 kb on - strand, within ydcLat 718.699 kb on - strand, within ydcLat 718.769 kb on + strand, within ydcLat 718.938 kb on + strand, within ydcLat 719.040 kb on - strand, within ydcLat 719.069 kb on + strand, within ydcLat 719.171 kb on + strand, within ydcLat 719.266 kb on + strandat 719.382 kb on - strandat 719.518 kb on + strandat 719.604 kb on + strandat 719.608 kb on - strandat 719.682 kb on - strand, within tehBat 719.947 kb on - strand, within tehBat 720.276 kb on - strand, within tehAat 720.406 kb on + strand, within tehAat 720.407 kb on - strand, within tehAat 720.424 kb on - strand, within tehAat 720.513 kb on - strand, within tehAat 720.667 kb on + strand, within tehAat 720.725 kb on - strand, within tehAat 721.137 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_JK32
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718,678 - ydcL JDDGAC_04105 0.13 -1.1
718,698 + ydcL JDDGAC_04105 0.16 +1.3
718,699 - ydcL JDDGAC_04105 0.16 -0.1
718,699 - ydcL JDDGAC_04105 0.16 -1.3
718,769 + ydcL JDDGAC_04105 0.26 +0.0
718,938 + ydcL JDDGAC_04105 0.51 +1.6
719,040 - ydcL JDDGAC_04105 0.67 -1.3
719,069 + ydcL JDDGAC_04105 0.71 -1.8
719,171 + ydcL JDDGAC_04105 0.86 -0.1
719,266 + +1.8
719,382 - +0.8
719,518 + -1.2
719,604 + +0.2
719,608 - -0.3
719,682 - tehB JDDGAC_04110 0.20 -1.3
719,947 - tehB JDDGAC_04110 0.64 +0.1
720,276 - tehA JDDGAC_04115 0.12 -0.2
720,406 + tehA JDDGAC_04115 0.25 +1.9
720,407 - tehA JDDGAC_04115 0.25 -0.9
720,424 - tehA JDDGAC_04115 0.27 -2.1
720,513 - tehA JDDGAC_04115 0.36 -2.6
720,667 + tehA JDDGAC_04115 0.51 +1.3
720,725 - tehA JDDGAC_04115 0.57 -0.5
721,137 - +0.6

Or see this region's nucleotide sequence