Strain Fitness in Escherichia coli ECRC98 around JDDGAC_02335

Experiment: WM_JK42

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_JK42
422,922	-	mlc	JDDGAC_02330	0.60	-1.0
422,949	+	mlc	JDDGAC_02330	0.62	+0.5
422,949	+	mlc	JDDGAC_02330	0.62	-0.3
423,152	+	mlc	JDDGAC_02330	0.79	+0.8
423,182	+	mlc	JDDGAC_02330	0.81	+0.9
423,235	-	mlc	JDDGAC_02330	0.86	-0.4
423,258	+	mlc	JDDGAC_02330	0.88	-2.4
423,287	-				-0.8
423,324	+				+0.4
423,471	-				+3.0
423,489	-				-1.1
423,504	-				-1.1
423,604	-	bioD	JDDGAC_02335	0.10	-1.5
423,748	+	bioD	JDDGAC_02335	0.31	+0.0
423,748	+	bioD	JDDGAC_02335	0.31	-2.3
423,749	-	bioD	JDDGAC_02335	0.31	+0.7
423,886	+	bioD	JDDGAC_02335	0.51	-1.4
424,137	-	bioD	JDDGAC_02335	0.87	+1.8
424,172	+				-0.6
424,182	+				-2.4
424,183	-				+0.2
424,183	-				-0.7
424,186	+				-0.0
424,213	+				-0.5
424,213	+				+0.2
424,281	-				-2.0
424,424	-	clcB	JDDGAC_02340	0.19	-1.0
424,431	+	clcB	JDDGAC_02340	0.20	+1.1
424,461	-	clcB	JDDGAC_02340	0.22	-0.1
424,461	-	clcB	JDDGAC_02340	0.22	-0.1
424,461	-	clcB	JDDGAC_02340	0.22	-1.8
424,584	-	clcB	JDDGAC_02340	0.32	-0.9
424,593	+	clcB	JDDGAC_02340	0.33	+1.2
424,808	+	clcB	JDDGAC_02340	0.50	+0.4
424,808	+	clcB	JDDGAC_02340	0.50	-0.7
424,809	-	clcB	JDDGAC_02340	0.50	-0.6
424,877	-	clcB	JDDGAC_02340	0.55	-0.5
424,907	-	clcB	JDDGAC_02340	0.58	+2.3
425,108	+	clcB	JDDGAC_02340	0.74	-0.1