Strain Fitness in Escherichia coli ECRC101 around MCAODC_26350

Experiment: GB_Bas38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_Bas38
1,989,847	+				+1.9
1,989,859	+				-0.9
1,989,860	-				-0.7
1,989,866	+				-1.3
1,989,877	-				+0.5
1,989,923	+				+1.4
1,989,924	-				+0.4
1,989,929	+				-0.4
1,989,964	+				-0.4
1,989,965	-				+0.8
1,989,970	+				+1.4
1,989,970	+				+0.5
1,989,971	-				-0.3
1,989,989	-				-1.8
1,989,989	-				+0.3
1,989,997	+				+0.1
1,990,102	+	uof	MCAODC_26340	0.67	-0.3
1,990,167	-				+2.1
1,990,612	+				-0.1
1,990,612	+				-0.0
1,990,613	-				-0.1
1,990,654	+				-2.4
1,990,662	-				-0.3
1,990,750	+	chiQ	MCAODC_26350	0.30	-0.6
1,990,818	+	chiQ	MCAODC_26350	0.50	+0.5
1,990,871	+	chiQ	MCAODC_26350	0.67	-4.1
1,990,872	-	chiQ	MCAODC_26350	0.67	-1.8
1,990,882	+	chiQ	MCAODC_26350	0.70	+0.1
1,990,882	+	chiQ	MCAODC_26350	0.70	+0.5
1,991,054	-				+0.6
1,991,246	+	chiP	MCAODC_26355	0.24	-1.8
1,991,246	+	chiP	MCAODC_26355	0.24	-1.7
1,991,247	-	chiP	MCAODC_26355	0.24	-0.2
1,991,247	-	chiP	MCAODC_26355	0.24	-1.8
1,991,281	-	chiP	MCAODC_26355	0.28	-0.4
1,991,294	+	chiP	MCAODC_26355	0.29	+1.8
1,991,301	-	chiP	MCAODC_26355	0.30	-0.2
1,991,301	-	chiP	MCAODC_26355	0.30	+0.4
1,991,348	+	chiP	MCAODC_26355	0.35	-0.8
1,991,415	+	chiP	MCAODC_26355	0.42	+0.9
1,991,416	-	chiP	MCAODC_26355	0.43	-0.4
1,991,441	+	chiP	MCAODC_26355	0.45	-2.4
1,991,454	+	chiP	MCAODC_26355	0.47	-0.5
1,991,454	+	chiP	MCAODC_26355	0.47	-0.4
1,991,455	-	chiP	MCAODC_26355	0.47	-1.2
1,991,455	-	chiP	MCAODC_26355	0.47	-0.2
1,991,455	-	chiP	MCAODC_26355	0.47	-0.1
1,991,455	-	chiP	MCAODC_26355	0.47	+0.3
1,991,455	-	chiP	MCAODC_26355	0.47	-0.0
1,991,622	-	chiP	MCAODC_26355	0.65	+1.1
1,991,630	+	chiP	MCAODC_26355	0.66	+0.8
1,991,631	-	chiP	MCAODC_26355	0.66	-0.3
1,991,688	-	chiP	MCAODC_26355	0.72	+0.4
1,991,700	-	chiP	MCAODC_26355	0.74	-1.4
1,991,700	-	chiP	MCAODC_26355	0.74	+0.8
1,991,778	-	chiP	MCAODC_26355	0.82	+0.5
1,991,844	-	chiP	MCAODC_26355	0.90	+1.3
1,991,861	+				-2.4
1,991,861	+				+0.4
1,991,925	-				+1.1
1,991,925	-				-2.7
1,991,929	-				-0.3