Strain Fitness in Escherichia coli ECRC98 around JDDGAC_21780

Experiment: WM_TP11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP11
4,166,774	+	nlpI	JDDGAC_21770	0.13	+1.2
4,166,799	+	nlpI	JDDGAC_21770	0.15	-1.2
4,166,799	+	nlpI	JDDGAC_21770	0.15	-1.8
4,166,800	-	nlpI	JDDGAC_21770	0.16	-0.8
4,166,856	-	nlpI	JDDGAC_21770	0.22	-1.9
4,166,875	+	nlpI	JDDGAC_21770	0.24	-0.9
4,166,875	+	nlpI	JDDGAC_21770	0.24	-1.4
4,166,875	+	nlpI	JDDGAC_21770	0.24	-0.6
4,166,875	+	nlpI	JDDGAC_21770	0.24	-0.8
4,166,875	+	nlpI	JDDGAC_21770	0.24	-1.1
4,166,876	-	nlpI	JDDGAC_21770	0.24	-0.7
4,166,880	+	nlpI	JDDGAC_21770	0.25	-3.5
4,166,880	+	nlpI	JDDGAC_21770	0.25	-1.7
4,166,966	+	nlpI	JDDGAC_21770	0.34	-0.3
4,166,974	+	nlpI	JDDGAC_21770	0.35	-2.3
4,166,974	+	nlpI	JDDGAC_21770	0.35	-2.5
4,167,046	+	nlpI	JDDGAC_21770	0.43	-3.5
4,167,046	+	nlpI	JDDGAC_21770	0.43	-0.2
4,167,052	+	nlpI	JDDGAC_21770	0.44	-4.1
4,167,082	+	nlpI	JDDGAC_21770	0.47	-1.8
4,167,082	+	nlpI	JDDGAC_21770	0.47	-0.1
4,167,172	+	nlpI	JDDGAC_21770	0.58	-1.5
4,167,277	+	nlpI	JDDGAC_21770	0.69	-3.8
4,167,277	+	nlpI	JDDGAC_21770	0.69	-1.2
4,167,376	+	nlpI	JDDGAC_21770	0.81	-1.7
4,167,376	+	nlpI	JDDGAC_21770	0.81	-1.1
4,167,377	-	nlpI	JDDGAC_21770	0.81	-1.5
4,167,380	+	nlpI	JDDGAC_21770	0.81	-0.7
4,167,388	+	nlpI	JDDGAC_21770	0.82	-1.2
4,167,388	+	nlpI	JDDGAC_21770	0.82	-1.2
4,167,388	+	nlpI	JDDGAC_21770	0.82	-1.7
4,167,391	+	nlpI	JDDGAC_21770	0.82	-1.6
4,167,391	+	nlpI	JDDGAC_21770	0.82	-3.3
4,167,395	+	nlpI	JDDGAC_21770	0.83	+0.7
4,167,459	+				-1.0
4,167,553	+				+0.4
4,167,553	+				-1.4
4,167,621	+				+0.7
4,167,627	+				-0.6
4,167,684	+	yrbN	JDDGAC_21775	0.38	+0.5
4,167,723	+	yrbN	JDDGAC_21775	0.86	-1.5
4,168,328	+	deaD	JDDGAC_21780	0.32	-1.5
4,168,679	+	deaD	JDDGAC_21780	0.50	+0.5
4,168,711	-	deaD	JDDGAC_21780	0.52	-0.2
4,168,897	+	deaD	JDDGAC_21780	0.62	-1.2
4,169,033	+	deaD	JDDGAC_21780	0.69	-0.3
4,169,277	+	deaD	JDDGAC_21780	0.82	-0.3
4,169,291	+	deaD	JDDGAC_21780	0.83	-3.5
4,169,333	+	deaD	JDDGAC_21780	0.85	-1.9
4,169,360	+	deaD	JDDGAC_21780	0.86	-2.1
4,169,424	-	deaD	JDDGAC_21780	0.90	-0.8
4,169,486	+				+1.1
4,169,614	-				+1.5
4,169,644	-				-0.8
4,169,653	+				+0.4
4,169,653	+				-0.9
4,169,655	+				+0.3
4,169,655	+				-1.1
4,169,655	+				+0.6
4,169,656	-				+1.0
4,169,727	+				-0.3
4,169,727	+				-0.2
4,169,727	+				-0.8
4,169,728	-				+2.1
4,169,841	-				-0.1
4,169,919	-	mtr	JDDGAC_21785	0.12	-0.1
4,169,930	+	mtr	JDDGAC_21785	0.13	+1.1
4,169,931	-	mtr	JDDGAC_21785	0.13	+1.3
4,170,066	+	mtr	JDDGAC_21785	0.24	-0.2
4,170,066	+	mtr	JDDGAC_21785	0.24	+2.2
4,170,066	+	mtr	JDDGAC_21785	0.24	+0.6
4,170,067	-	mtr	JDDGAC_21785	0.24	+0.4
4,170,067	-	mtr	JDDGAC_21785	0.24	+2.4
4,170,068	+	mtr	JDDGAC_21785	0.24	+2.4
4,170,078	+	mtr	JDDGAC_21785	0.25	-0.6
4,170,078	+	mtr	JDDGAC_21785	0.25	-0.4
4,170,078	+	mtr	JDDGAC_21785	0.25	-0.2
4,170,078	+	mtr	JDDGAC_21785	0.25	+0.3
4,170,078	+	mtr	JDDGAC_21785	0.25	+0.2
4,170,078	+	mtr	JDDGAC_21785	0.25	+0.3
4,170,079	-	mtr	JDDGAC_21785	0.25	-0.8
4,170,079	-	mtr	JDDGAC_21785	0.25	-2.1
4,170,079	-	mtr	JDDGAC_21785	0.25	+0.5
4,170,084	+	mtr	JDDGAC_21785	0.25	+0.9
4,170,084	+	mtr	JDDGAC_21785	0.25	+0.5
4,170,084	+	mtr	JDDGAC_21785	0.25	-0.7
4,170,085	-	mtr	JDDGAC_21785	0.25	-0.8
4,170,085	-	mtr	JDDGAC_21785	0.25	+0.2
4,170,087	-	mtr	JDDGAC_21785	0.26	-0.2
4,170,236	-	mtr	JDDGAC_21785	0.38	+0.0
4,170,336	+	mtr	JDDGAC_21785	0.46	+1.7
4,170,336	+	mtr	JDDGAC_21785	0.46	+0.4
4,170,336	+	mtr	JDDGAC_21785	0.46	+0.0
4,170,336	+	mtr	JDDGAC_21785	0.46	-0.3
4,170,336	+	mtr	JDDGAC_21785	0.46	-0.6
4,170,336	+	mtr	JDDGAC_21785	0.46	-0.1
4,170,337	-	mtr	JDDGAC_21785	0.46	-0.5
4,170,345	+	mtr	JDDGAC_21785	0.46	+0.6
4,170,418	-	mtr	JDDGAC_21785	0.52	+1.1
4,170,459	+	mtr	JDDGAC_21785	0.55	+0.3
4,170,486	+	mtr	JDDGAC_21785	0.58	-0.7
4,170,486	+	mtr	JDDGAC_21785	0.58	-0.5
4,170,486	+	mtr	JDDGAC_21785	0.58	-0.5
4,170,486	+	mtr	JDDGAC_21785	0.58	+2.0
4,170,488	+	mtr	JDDGAC_21785	0.58	-0.3
4,170,488	+	mtr	JDDGAC_21785	0.58	-0.9
4,170,488	+	mtr	JDDGAC_21785	0.58	+1.6
4,170,488	+	mtr	JDDGAC_21785	0.58	-0.8
4,170,489	-	mtr	JDDGAC_21785	0.58	-2.4
4,170,564	-	mtr	JDDGAC_21785	0.64	+0.1
4,170,577	+	mtr	JDDGAC_21785	0.65	-1.0
4,170,608	+	mtr	JDDGAC_21785	0.67	-0.5