Strain Fitness in Escherichia coli ECRC98 around JDDGAC_20555

Experiment: WM_TP11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP11
3,940,543	-	pstS	JDDGAC_20545	0.84	-0.6
3,940,543	-	pstS	JDDGAC_20545	0.84	+2.1
3,940,563	+	pstS	JDDGAC_20545	0.86	-1.0
3,940,563	+	pstS	JDDGAC_20545	0.86	-0.9
3,940,563	+	pstS	JDDGAC_20545	0.86	-0.4
3,940,563	+	pstS	JDDGAC_20545	0.86	-0.0
3,940,564	-	pstS	JDDGAC_20545	0.86	+0.0
3,940,564	-	pstS	JDDGAC_20545	0.86	-0.8
3,940,566	-	pstS	JDDGAC_20545	0.86	-1.0
3,940,619	+				+0.6
3,940,645	+				+0.6
3,940,660	-				+2.4
3,940,671	+				-1.4
3,940,672	-				+0.9
3,940,672	-				-1.8
3,940,672	-				+1.0
3,940,711	+				-0.1
3,940,713	+				-0.0
3,940,714	-				+1.0
3,940,727	-				-1.3
3,940,753	+				+0.1
3,940,758	+				-1.2
3,940,759	-				+1.1
3,940,759	-				-0.1
3,940,861	+		JDDGAC_20550	0.26	+0.5
3,940,878	+		JDDGAC_20550	0.29	+0.3
3,940,884	+		JDDGAC_20550	0.30	+0.6
3,940,884	+		JDDGAC_20550	0.30	+0.2
3,940,884	+		JDDGAC_20550	0.30	-0.6
3,940,884	+		JDDGAC_20550	0.30	+0.0
3,940,884	+		JDDGAC_20550	0.30	+1.3
3,940,885	-		JDDGAC_20550	0.30	+0.1
3,940,885	-		JDDGAC_20550	0.30	+0.4
3,940,885	-		JDDGAC_20550	0.30	-0.2
3,940,885	-		JDDGAC_20550	0.30	+1.0
3,940,885	-		JDDGAC_20550	0.30	-0.7
3,940,885	-		JDDGAC_20550	0.30	+1.3
3,940,995	+		JDDGAC_20550	0.48	-0.2
3,940,996	-		JDDGAC_20550	0.49	-0.2
3,941,043	-		JDDGAC_20550	0.56	-2.0
3,941,077	+		JDDGAC_20550	0.62	-0.8
3,941,198	+		JDDGAC_20550	0.82	-0.2
3,941,198	+		JDDGAC_20550	0.82	+1.4
3,941,262	+				+0.2
3,941,262	+				+0.3
3,941,263	-				-0.7
3,941,439	-				+1.6
3,941,517	-				+0.3
3,941,549	+				+0.9
3,941,549	+				+0.8
3,941,550	-				+0.2
3,941,550	-				-0.4
3,941,551	+				+0.9
3,941,687	-	glpD	JDDGAC_20555	0.11	-0.2
3,941,765	-	glpD	JDDGAC_20555	0.16	+0.8
3,941,833	+	glpD	JDDGAC_20555	0.21	+0.7
3,942,036	-	glpD	JDDGAC_20555	0.34	-0.5
3,942,138	-	glpD	JDDGAC_20555	0.41	+2.4
3,942,203	-	glpD	JDDGAC_20555	0.45	+1.1
3,942,203	-	glpD	JDDGAC_20555	0.45	+0.4
3,942,264	-	glpD	JDDGAC_20555	0.49	-1.5
3,942,264	-	glpD	JDDGAC_20555	0.49	-1.8
3,942,270	-	glpD	JDDGAC_20555	0.50	-1.9
3,942,289	+	glpD	JDDGAC_20555	0.51	-0.8
3,942,290	-	glpD	JDDGAC_20555	0.51	-0.2
3,942,509	+	glpD	JDDGAC_20555	0.66	+0.6
3,942,510	-	glpD	JDDGAC_20555	0.66	-1.3
3,942,605	-	glpD	JDDGAC_20555	0.72	-1.5
3,942,850	+	glpD	JDDGAC_20555	0.88	-1.6
3,942,863	-	glpD	JDDGAC_20555	0.89	-0.3
3,942,999	+				+0.1
3,943,076	+				+0.1
3,943,076	+				+3.2
3,943,077	-				+0.2
3,943,077	-				+0.0
3,943,080	-				-0.6
3,943,097	+				+1.1
3,943,128	+				+1.0
3,943,132	+				-0.5
3,943,135	-				-0.3
3,943,141	-				+1.0
3,943,167	-				+1.0
3,943,232	+				+0.3
3,943,343	-	glpE	JDDGAC_20560	0.39	-1.8
3,943,368	-	glpE	JDDGAC_20560	0.47	-1.3
3,943,368	-	glpE	JDDGAC_20560	0.47	+0.8
3,943,421	+	glpE	JDDGAC_20560	0.63	+0.5
3,943,444	-	glpE	JDDGAC_20560	0.70	-0.1
3,943,473	+	glpE	JDDGAC_20560	0.79	+2.6
3,943,474	-	glpE	JDDGAC_20560	0.79	-0.3
3,943,474	-	glpE	JDDGAC_20560	0.79	-0.1
3,943,475	+	glpE	JDDGAC_20560	0.80	+0.2
3,943,475	+	glpE	JDDGAC_20560	0.80	+0.4
3,943,547	+				+0.1
3,943,548	-				-0.2
3,943,548	-				-1.1
3,943,549	+				+3.1
3,943,549	+				-0.7
3,943,549	+				-0.3
3,943,550	-				-0.8
3,943,597	+				+0.4
3,943,598	-				+0.1
3,943,640	+				-0.0
3,943,640	+				-0.8
3,943,640	+				+1.3
3,943,660	+				+0.9
3,943,681	+	glpG	JDDGAC_20565	0.11	-1.0
3,943,776	-	glpG	JDDGAC_20565	0.23	+0.4
3,943,910	-	glpG	JDDGAC_20565	0.39	-0.8
3,943,948	-	glpG	JDDGAC_20565	0.44	-3.1
3,943,997	+	glpG	JDDGAC_20565	0.49	+0.3
3,944,014	-	glpG	JDDGAC_20565	0.52	-0.3