Strain Fitness in Escherichia coli ECRC98 around JDDGAC_10750

Experiment: WM_TP11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP11
1,929,196	+	potE	JDDGAC_10745	0.34	+1.0
1,929,202	+	potE	JDDGAC_10745	0.34	-0.1
1,929,220	+	potE	JDDGAC_10745	0.36	-1.0
1,929,322	-	potE	JDDGAC_10745	0.44	+0.5
1,929,337	+	potE	JDDGAC_10745	0.45	+1.2
1,929,383	-	potE	JDDGAC_10745	0.48	-1.2
1,929,391	-	potE	JDDGAC_10745	0.49	-0.4
1,929,410	-	potE	JDDGAC_10745	0.50	-1.5
1,929,410	-	potE	JDDGAC_10745	0.50	+1.0
1,929,436	+	potE	JDDGAC_10745	0.52	-0.3
1,929,441	+	potE	JDDGAC_10745	0.53	-1.9
1,929,442	-	potE	JDDGAC_10745	0.53	-2.2
1,929,458	+	potE	JDDGAC_10745	0.54	-0.4
1,929,459	-	potE	JDDGAC_10745	0.54	+0.4
1,929,461	-	potE	JDDGAC_10745	0.54	-2.1
1,929,693	+	potE	JDDGAC_10745	0.72	-0.1
1,929,693	+	potE	JDDGAC_10745	0.72	-1.1
1,929,694	-	potE	JDDGAC_10745	0.72	-1.6
1,929,694	-	potE	JDDGAC_10745	0.72	+0.5
1,929,827	-	potE	JDDGAC_10745	0.82	-0.6
1,929,836	+	potE	JDDGAC_10745	0.82	+0.7
1,929,859	-	potE	JDDGAC_10745	0.84	-0.7
1,929,939	-				-0.1
1,929,947	+				-1.6
1,929,956	+				-0.3
1,929,957	-				-1.5
1,929,957	-				-1.3
1,930,019	+				-0.1
1,930,019	+				+1.1
1,930,019	+				+0.8
1,930,020	-				+1.0
1,930,065	-				-1.1
1,930,218	+				-0.3
1,930,218	+				-1.1
1,930,218	+				-2.3
1,930,218	+				-1.8
1,930,219	-				-1.5
1,930,219	-				-0.3
1,930,219	-				-1.8
1,930,219	-				-2.4
1,930,219	-				-2.1
1,930,219	-				-1.3
1,930,220	+				-1.0
1,930,220	+				-0.1
1,930,220	+				+2.0
1,930,220	+				-2.5
1,930,221	-				-0.3
1,930,221	-				-1.0
1,930,291	-	pgm	JDDGAC_10750	0.10	-0.9
1,930,291	-	pgm	JDDGAC_10750	0.10	+0.2
1,930,430	+	pgm	JDDGAC_10750	0.19	-0.5
1,930,466	+	pgm	JDDGAC_10750	0.21	-2.2
1,930,466	+	pgm	JDDGAC_10750	0.21	-2.1
1,930,466	+	pgm	JDDGAC_10750	0.21	-1.3
1,930,664	-	pgm	JDDGAC_10750	0.33	-2.0
1,930,772	+	pgm	JDDGAC_10750	0.40	-0.8
1,930,772	+	pgm	JDDGAC_10750	0.40	-0.1
1,930,772	+	pgm	JDDGAC_10750	0.40	+0.3
1,930,773	-	pgm	JDDGAC_10750	0.40	-1.2
1,930,773	-	pgm	JDDGAC_10750	0.40	-0.9
1,930,773	-	pgm	JDDGAC_10750	0.40	-1.7
1,930,844	+	pgm	JDDGAC_10750	0.44	-2.1
1,931,012	+	pgm	JDDGAC_10750	0.54	-0.4
1,931,013	-	pgm	JDDGAC_10750	0.54	-3.0
1,931,013	-	pgm	JDDGAC_10750	0.54	-0.6
1,931,194	-	pgm	JDDGAC_10750	0.65	-2.6
1,931,295	-	pgm	JDDGAC_10750	0.71	-2.5
1,931,334	+	pgm	JDDGAC_10750	0.74	-0.3
1,931,334	+	pgm	JDDGAC_10750	0.74	-0.8
1,931,334	+	pgm	JDDGAC_10750	0.74	-1.1
1,931,334	+	pgm	JDDGAC_10750	0.74	-0.7
1,931,335	-	pgm	JDDGAC_10750	0.74	-1.1
1,931,335	-	pgm	JDDGAC_10750	0.74	-1.9
1,931,338	-	pgm	JDDGAC_10750	0.74	-1.8
1,931,338	-	pgm	JDDGAC_10750	0.74	+0.5
1,931,437	-	pgm	JDDGAC_10750	0.80	-3.4
1,931,443	+	pgm	JDDGAC_10750	0.80	-0.9
1,931,519	+	pgm	JDDGAC_10750	0.85	-1.9
1,931,519	+	pgm	JDDGAC_10750	0.85	-1.6
1,931,519	+	pgm	JDDGAC_10750	0.85	-0.9
1,931,519	+	pgm	JDDGAC_10750	0.85	-2.9
1,931,520	-	pgm	JDDGAC_10750	0.85	+0.0
1,931,520	-	pgm	JDDGAC_10750	0.85	-1.3
1,931,520	-	pgm	JDDGAC_10750	0.85	-0.9
1,931,684	+				-1.1
1,931,684	+				-0.0
1,931,684	+				-0.9
1,931,685	-				-0.4
1,931,685	-				-1.5
1,931,685	-				-0.4
1,931,685	-				-1.3
1,931,790	+				-1.5
1,931,795	-				+2.0
1,932,381	+				+0.2
1,932,382	-				-0.9
1,932,382	-				-0.9
1,932,382	-				-0.4
1,932,388	-				-0.3
1,932,388	-				-1.2
1,932,479	+				-2.9
1,932,479	+				+0.6
1,932,479	+				-1.3
1,932,480	-				+0.2
1,932,480	-				-2.0
1,932,480	-				-0.0
1,932,480	-				-0.8
1,932,483	-				-0.6
1,932,483	-				-0.0
1,932,483	-				+0.5
1,932,564	-				+0.5
1,932,564	-				+0.5
1,932,564	-				+1.2
1,932,564	-				-0.7
1,932,650	+	ybfF	JDDGAC_10760	0.17	-0.2
1,932,650	+	ybfF	JDDGAC_10760	0.17	+0.6
1,932,651	-	ybfF	JDDGAC_10760	0.17	-0.2
1,932,651	-	ybfF	JDDGAC_10760	0.17	+0.3
1,932,651	-	ybfF	JDDGAC_10760	0.17	+1.9
1,932,666	-	ybfF	JDDGAC_10760	0.19	-0.7