Experiment: WM_TP11
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt terC and terB are separated by 22 nucleotides terB and terA are separated by 22 nucleotides terA and terZ overlap by 1 nucleotides terZ and JDDGAC_07745 are separated by 322 nucleotides
JDDGAC_07725: terC - tellurium resistance membrane protein TerC, at 1,338,349 to 1,339,389
terC
JDDGAC_07730: terB - Tellurium resistance protein TerB, at 1,339,412 to 1,339,867
terB
JDDGAC_07735: terA - tellurium resistance protein TerA, at 1,339,890 to 1,341,047
terA
JDDGAC_07740: terZ - tellurium resistance-associated protein TerZ, at 1,341,047 to 1,341,628
terZ
JDDGAC_07745: JDDGAC_07745 - carbamoyl-phosphate synthase large chain, at 1,341,951 to 1,343,009
_07745
Position (kb) 1339
1340
1341
1342 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1338.964 kb on - strand, within terC at 1338.967 kb on - strand, within terC at 1338.986 kb on + strand, within terC at 1339.065 kb on - strand, within terC at 1339.303 kb on - strand at 1339.315 kb on - strand at 1339.389 kb on + strand at 1339.390 kb on - strand at 1339.516 kb on + strand, within terB at 1339.527 kb on - strand, within terB at 1339.573 kb on - strand, within terB at 1339.573 kb on - strand, within terB at 1339.658 kb on - strand, within terB at 1339.758 kb on - strand, within terB at 1339.758 kb on - strand, within terB at 1339.834 kb on + strand at 1339.868 kb on - strand at 1339.983 kb on - strand at 1340.136 kb on - strand, within terA at 1340.136 kb on - strand, within terA at 1340.144 kb on - strand, within terA at 1340.163 kb on - strand, within terA at 1340.208 kb on + strand, within terA at 1340.301 kb on - strand, within terA at 1340.301 kb on - strand, within terA at 1340.301 kb on - strand, within terA at 1340.561 kb on + strand, within terA at 1340.592 kb on - strand, within terA at 1340.640 kb on - strand, within terA at 1340.643 kb on - strand, within terA at 1340.643 kb on - strand, within terA at 1340.840 kb on + strand, within terA at 1340.841 kb on - strand, within terA at 1340.852 kb on - strand, within terA at 1340.906 kb on - strand, within terA at 1341.082 kb on + strand at 1341.146 kb on - strand, within terZ at 1341.303 kb on + strand, within terZ at 1341.468 kb on - strand, within terZ at 1341.468 kb on - strand, within terZ at 1341.899 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction WM_TP11 remove 1,338,964 - terC JDDGAC_07725 0.59 -2.1 1,338,967 - terC JDDGAC_07725 0.59 -0.4 1,338,986 + terC JDDGAC_07725 0.61 +1.3 1,339,065 - terC JDDGAC_07725 0.69 -0.6 1,339,303 - -2.1 1,339,315 - -2.8 1,339,389 + -1.4 1,339,390 - -0.8 1,339,516 + terB JDDGAC_07730 0.23 -0.9 1,339,527 - terB JDDGAC_07730 0.25 +0.0 1,339,573 - terB JDDGAC_07730 0.35 +0.1 1,339,573 - terB JDDGAC_07730 0.35 -3.2 1,339,658 - terB JDDGAC_07730 0.54 -1.0 1,339,758 - terB JDDGAC_07730 0.76 +0.1 1,339,758 - terB JDDGAC_07730 0.76 +1.6 1,339,834 + -2.2 1,339,868 - +0.4 1,339,983 - -1.1 1,340,136 - terA JDDGAC_07735 0.21 -1.2 1,340,136 - terA JDDGAC_07735 0.21 -3.3 1,340,144 - terA JDDGAC_07735 0.22 +0.4 1,340,163 - terA JDDGAC_07735 0.24 -0.3 1,340,208 + terA JDDGAC_07735 0.27 -1.3 1,340,301 - terA JDDGAC_07735 0.35 -1.1 1,340,301 - terA JDDGAC_07735 0.35 -2.8 1,340,301 - terA JDDGAC_07735 0.35 -2.9 1,340,561 + terA JDDGAC_07735 0.58 -2.2 1,340,592 - terA JDDGAC_07735 0.61 -0.7 1,340,640 - terA JDDGAC_07735 0.65 -1.3 1,340,643 - terA JDDGAC_07735 0.65 -1.2 1,340,643 - terA JDDGAC_07735 0.65 +0.2 1,340,840 + terA JDDGAC_07735 0.82 -0.2 1,340,841 - terA JDDGAC_07735 0.82 -1.2 1,340,852 - terA JDDGAC_07735 0.83 -0.3 1,340,906 - terA JDDGAC_07735 0.88 -0.5 1,341,082 + -1.3 1,341,146 - terZ JDDGAC_07740 0.17 -1.4 1,341,303 + terZ JDDGAC_07740 0.44 -1.2 1,341,468 - terZ JDDGAC_07740 0.72 -0.1 1,341,468 - terZ JDDGAC_07740 0.72 -2.2 1,341,899 - -0.2
Or see this region's nucleotide sequence