Strain Fitness in Escherichia coli ECRC101 around MCAODC_07005

Experiment: GB_Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_Bas14
1,425,475	+	yadH	MCAODC_06995	0.50	-0.6
1,425,475	+	yadH	MCAODC_06995	0.50	+0.2
1,425,475	+	yadH	MCAODC_06995	0.50	-1.1
1,425,493	-	yadH	MCAODC_06995	0.51	+0.2
1,425,493	-	yadH	MCAODC_06995	0.51	+1.2
1,425,546	+	yadH	MCAODC_06995	0.56	+0.2
1,425,546	+	yadH	MCAODC_06995	0.56	+0.2
1,425,546	+	yadH	MCAODC_06995	0.56	-0.5
1,425,546	+	yadH	MCAODC_06995	0.56	+3.3
1,425,547	-	yadH	MCAODC_06995	0.56	+0.5
1,425,547	-	yadH	MCAODC_06995	0.56	+0.8
1,425,547	-	yadH	MCAODC_06995	0.56	+0.0
1,425,547	-	yadH	MCAODC_06995	0.56	+0.4
1,425,547	-	yadH	MCAODC_06995	0.56	-1.4
1,425,630	+	yadH	MCAODC_06995	0.63	+0.4
1,425,648	+	yadH	MCAODC_06995	0.65	-1.4
1,425,648	+	yadH	MCAODC_06995	0.65	-0.2
1,425,648	+	yadH	MCAODC_06995	0.65	-0.5
1,425,694	+	yadH	MCAODC_06995	0.69	+0.1
1,425,712	+	yadH	MCAODC_06995	0.71	+2.1
1,425,756	+	yadH	MCAODC_06995	0.74	-0.2
1,425,848	-	yadH	MCAODC_06995	0.83	+0.6
1,425,871	+	yadH	MCAODC_06995	0.85	+0.8
1,425,871	+	yadH	MCAODC_06995	0.85	-0.4
1,425,871	+	yadH	MCAODC_06995	0.85	-0.8
1,425,871	+	yadH	MCAODC_06995	0.85	+0.1
1,425,871	+	yadH	MCAODC_06995	0.85	+0.7
1,425,872	-	yadH	MCAODC_06995	0.85	-0.8
1,426,091	-				+0.5
1,426,170	+		MCAODC_07000	0.20	+2.0
1,426,211	-		MCAODC_07000	0.35	-0.5
1,426,212	+		MCAODC_07000	0.35	-2.8
1,426,213	-		MCAODC_07000	0.36	-0.5
1,426,213	-		MCAODC_07000	0.36	-0.1
1,426,234	-		MCAODC_07000	0.43	-0.5
1,426,247	-		MCAODC_07000	0.48	-0.3
1,426,270	+		MCAODC_07000	0.56	-0.1
1,426,270	+		MCAODC_07000	0.56	-2.6
1,426,270	+		MCAODC_07000	0.56	-2.2
1,426,271	-		MCAODC_07000	0.57	+0.5
1,426,271	-		MCAODC_07000	0.57	-1.1
1,426,278	+		MCAODC_07000	0.59	-0.6
1,426,281	+		MCAODC_07000	0.60	+0.0
1,426,281	+		MCAODC_07000	0.60	+0.4
1,426,281	+		MCAODC_07000	0.60	+0.2
1,426,282	-		MCAODC_07000	0.61	-0.4
1,426,282	-		MCAODC_07000	0.61	+0.1
1,426,285	+		MCAODC_07000	0.62	-0.1
1,426,285	+		MCAODC_07000	0.62	-0.4
1,426,286	-		MCAODC_07000	0.62	+0.2
1,426,327	+		MCAODC_07000	0.77	-0.9
1,426,345	-		MCAODC_07000	0.83	+0.2
1,426,345	-		MCAODC_07000	0.83	+0.6
1,426,368	+				+0.3
1,426,368	+				-0.5
1,426,368	+				+1.2
1,426,368	+				+1.3
1,426,368	+				-0.4
1,426,368	+				+1.6
1,426,369	-				+0.0
1,426,369	-				-1.2
1,426,369	-				-0.2
1,426,369	-				-0.3
1,426,369	-				+1.3
1,426,372	+				+1.0
1,426,372	+				+0.1
1,426,372	+				-0.2
1,426,372	+				-1.0
1,426,372	+				-0.3
1,426,374	+				-0.3
1,426,374	+				-0.0
1,426,374	+				+0.3
1,426,375	-				-2.7
1,426,381	-				-1.1
1,426,578	+	hicB	MCAODC_07005	0.53	+0.5
1,426,578	+	hicB	MCAODC_07005	0.53	-0.2
1,426,579	-	hicB	MCAODC_07005	0.53	-2.2
1,426,600	+	hicB	MCAODC_07005	0.59	-1.0
1,426,665	+	hicB	MCAODC_07005	0.77	-0.8
1,426,668	+	hicB	MCAODC_07005	0.78	+0.1
1,426,668	+	hicB	MCAODC_07005	0.78	-0.4
1,426,701	+	hicB	MCAODC_07005	0.87	-2.9
1,426,701	+	hicB	MCAODC_07005	0.87	-0.8
1,426,705	+	hicB	MCAODC_07005	0.88	-4.2
1,426,705	+	hicB	MCAODC_07005	0.88	-3.2
1,426,705	+	hicB	MCAODC_07005	0.88	-1.1
1,426,705	+	hicB	MCAODC_07005	0.88	-1.2
1,426,706	-	hicB	MCAODC_07005	0.89	-2.6
1,426,706	-	hicB	MCAODC_07005	0.89	-0.8
1,426,706	-	hicB	MCAODC_07005	0.89	-2.1
1,426,707	+	hicB	MCAODC_07005	0.89	-2.4
1,426,707	+	hicB	MCAODC_07005	0.89	-2.2
1,426,710	+	hicB	MCAODC_07005	0.90	-0.9
1,426,710	+	hicB	MCAODC_07005	0.90	-2.6
1,426,744	+				-1.6
1,426,744	+				+0.3
1,426,752	-				-0.6
1,426,782	+				+1.0
1,426,783	-				-0.1
1,426,797	+				-0.5
1,426,798	-				-1.0
1,426,798	-				+0.1
1,426,798	-				-0.5
1,426,811	-				+0.6
1,426,849	+				-0.1
1,426,851	+				-0.4
1,426,851	+				-0.3
1,426,852	-				+0.9
1,426,852	-				-0.5
1,426,852	-				-0.6
1,426,852	-				-1.2
1,426,852	-				-1.2
1,426,852	-				-0.2
1,426,918	+	fba	MCAODC_07010	0.14	-0.3
1,426,927	-	fba	MCAODC_07010	0.15	-0.4
1,426,927	-	fba	MCAODC_07010	0.15	-0.2
1,426,927	-	fba	MCAODC_07010	0.15	+0.1
1,426,927	-	fba	MCAODC_07010	0.15	-0.6
1,426,979	+	fba	MCAODC_07010	0.21	+0.2
1,426,980	-	fba	MCAODC_07010	0.21	+1.0
1,426,984	+	fba	MCAODC_07010	0.22	+0.4
1,426,996	-	fba	MCAODC_07010	0.23	+0.3
1,427,048	-	fba	MCAODC_07010	0.29	+0.2
1,427,108	+	fba	MCAODC_07010	0.36	-0.3
1,427,108	+	fba	MCAODC_07010	0.36	+1.7
1,427,109	-	fba	MCAODC_07010	0.36	+0.1
1,427,110	+	fba	MCAODC_07010	0.36	-0.6
1,427,138	-	fba	MCAODC_07010	0.40	-2.2
1,427,271	-	fba	MCAODC_07010	0.55	+0.1
1,427,363	-	fba	MCAODC_07010	0.66	+0.5
1,427,363	-	fba	MCAODC_07010	0.66	+2.8
1,427,363	-	fba	MCAODC_07010	0.66	+0.0
1,427,476	-	fba	MCAODC_07010	0.79	-2.0
1,427,476	-	fba	MCAODC_07010	0.79	+0.5
1,427,546	-	fba	MCAODC_07010	0.87	-0.2
1,427,587	+				+0.1
1,427,587	+				+0.1
1,427,588	-				+0.0
1,427,601	-				-0.7
1,427,644	+				+0.8
1,427,645	-				-1.2
1,427,649	-				+0.1
1,427,676	-				-2.1
1,427,685	+				-0.5
1,427,686	-				+0.2
1,427,737	-	ptsH	MCAODC_07015	0.18	+1.3