Strain Fitness in Escherichia coli ECRC98 around JDDGAC_07175

Experiment: Bas10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas10
1,241,532	-	nagZ	JDDGAC_07165	0.82	-0.0
1,241,607	+	nagZ	JDDGAC_07165	0.90	+0.5
1,241,683	-				-1.3
1,241,734	-				+0.4
1,241,737	-				+1.3
1,241,900	-	thiK	JDDGAC_07170	0.21	+0.0
1,241,983	+	thiK	JDDGAC_07170	0.31	+2.3
1,241,983	+	thiK	JDDGAC_07170	0.31	+0.6
1,242,067	-	thiK	JDDGAC_07170	0.42	-0.7
1,242,155	-	thiK	JDDGAC_07170	0.52	+0.1
1,242,211	-	thiK	JDDGAC_07170	0.59	-0.3
1,242,215	-	thiK	JDDGAC_07170	0.60	+0.2
1,242,217	+	thiK	JDDGAC_07170	0.60	-0.6
1,242,253	+	thiK	JDDGAC_07170	0.64	+0.3
1,242,306	+	thiK	JDDGAC_07170	0.71	+0.6
1,242,307	-	thiK	JDDGAC_07170	0.71	-0.7
1,242,307	-	thiK	JDDGAC_07170	0.71	-0.9
1,242,461	+	thiK	JDDGAC_07170	0.89	-0.8
1,242,602	-	lpoB	JDDGAC_07175	0.11	-0.4
1,242,638	+	lpoB	JDDGAC_07175	0.17	-0.1
1,242,648	-	lpoB	JDDGAC_07175	0.19	-0.8
1,242,648	-	lpoB	JDDGAC_07175	0.19	-1.5
1,242,676	+	lpoB	JDDGAC_07175	0.23	-1.8
1,242,835	-	lpoB	JDDGAC_07175	0.48	-0.9
1,242,837	+	lpoB	JDDGAC_07175	0.48	-0.9
1,242,853	-	lpoB	JDDGAC_07175	0.50	-0.6
1,242,904	-	lpoB	JDDGAC_07175	0.58	+1.6
1,242,938	+	lpoB	JDDGAC_07175	0.64	-0.3
1,243,185	+				-0.8
1,243,185	+				+0.6
1,243,191	+				-2.1
1,243,197	+				-0.3
1,243,321	-		JDDGAC_07180	0.36	-1.3
1,243,366	+		JDDGAC_07180	0.48	-0.0
1,243,369	-		JDDGAC_07180	0.49	+0.0
1,243,369	-		JDDGAC_07180	0.49	+0.0
1,243,397	-		JDDGAC_07180	0.56	+0.8
1,243,520	+		JDDGAC_07180	0.89	+1.3
1,243,576	-				+0.0
1,243,692	+	hinT	JDDGAC_07185	0.36	-0.2
1,243,909	-				+0.7
1,243,985	+				+1.1
1,244,024	-				-0.2
1,244,064	-				+0.8
1,244,065	+				-0.8
1,244,066	-				+0.2
1,244,066	-				-1.0
1,244,068	-				+0.2