Strain Fitness in Escherichia coli ECRC98 around JDDGAC_03675

Experiment: Bas10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas10
611,297	-				+0.2
611,422	-	lsrC	JDDGAC_03670	0.19	+0.2
611,739	-	lsrC	JDDGAC_03670	0.50	-2.3
611,880	+	lsrC	JDDGAC_03670	0.64	+0.4
612,296	-				+1.4
612,296	-				+0.1
612,298	+				-0.4
612,299	-				+2.3
612,311	-				+1.1
612,311	-				+1.0
612,364	-				+0.2
612,512	+	lsrA	JDDGAC_03675	0.17	-1.5
612,604	-	lsrA	JDDGAC_03675	0.23	+0.2
612,611	-	lsrA	JDDGAC_03675	0.24	-1.7
612,683	-	lsrA	JDDGAC_03675	0.28	-2.6
612,855	+	lsrA	JDDGAC_03675	0.40	-0.8
612,856	-	lsrA	JDDGAC_03675	0.40	-0.7
613,476	-	lsrA	JDDGAC_03675	0.80	-0.8
613,522	+	lsrA	JDDGAC_03675	0.83	-1.1
613,561	-	lsrA	JDDGAC_03675	0.85	-1.7
613,872	-				-0.7
613,872	-				+0.1
613,872	-				+1.8
613,872	-				+2.2
613,872	-				+3.2
613,937	+				+0.2
613,938	-				+1.2
613,968	+				-0.3
613,996	+				-0.1
614,031	+				-0.1
614,107	+				+0.9
614,223	+	lsrR	JDDGAC_03680	0.20	+0.4
614,355	+	lsrR	JDDGAC_03680	0.34	+0.5
614,421	+	lsrR	JDDGAC_03680	0.41	-0.1
614,499	+	lsrR	JDDGAC_03680	0.49	-0.9
614,730	-	lsrR	JDDGAC_03680	0.73	+0.2