Strain Fitness in Escherichia coli ECRC101 around MCAODC_12300

Experiment: GB_Bas36

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GB_Bas36
2,437,136	+	guaA	MCAODC_12295	0.54	+1.3
2,437,608	+	guaA	MCAODC_12295	0.84	+0.3
2,437,648	+	guaA	MCAODC_12295	0.86	-0.2
2,437,679	+	guaA	MCAODC_12295	0.88	-1.1
2,437,728	-				-1.5
2,437,821	+				+0.3
2,437,933	-				-0.0
2,437,933	-				-1.7
2,437,950	-				-0.6
2,438,183	+	yfgI	MCAODC_12300	0.42	-0.4
2,438,260	+	yfgI	MCAODC_12300	0.56	-1.1
2,438,459	+				+2.0
2,438,469	-				+0.4
2,438,512	-				+0.6
2,438,536	+				-0.1
2,438,563	-				-0.1
2,438,575	+	yfgH	MCAODC_12305	0.12	-0.3
2,438,575	+	yfgH	MCAODC_12305	0.12	+0.2
2,438,597	-	yfgH	MCAODC_12305	0.16	-0.2
2,438,624	-	yfgH	MCAODC_12305	0.22	-0.3
2,438,629	+	yfgH	MCAODC_12305	0.22	-0.8
2,438,629	+	yfgH	MCAODC_12305	0.22	-0.6
2,438,630	-	yfgH	MCAODC_12305	0.23	-1.0
2,438,630	-	yfgH	MCAODC_12305	0.23	-2.9
2,438,630	-	yfgH	MCAODC_12305	0.23	-1.0
2,438,630	-	yfgH	MCAODC_12305	0.23	-0.1
2,438,630	-	yfgH	MCAODC_12305	0.23	+1.8
2,438,631	+	yfgH	MCAODC_12305	0.23	-0.7
2,438,631	+	yfgH	MCAODC_12305	0.23	+5.3
2,438,631	+	yfgH	MCAODC_12305	0.23	-0.3
2,438,632	-	yfgH	MCAODC_12305	0.23	-1.5
2,438,632	-	yfgH	MCAODC_12305	0.23	-0.6
2,438,632	-	yfgH	MCAODC_12305	0.23	-0.2
2,438,650	+	yfgH	MCAODC_12305	0.27	+0.0
2,438,652	+	yfgH	MCAODC_12305	0.27	+1.7
2,438,652	+	yfgH	MCAODC_12305	0.27	+0.3
2,438,653	-	yfgH	MCAODC_12305	0.27	-0.8
2,438,653	-	yfgH	MCAODC_12305	0.27	-0.4
2,438,653	-	yfgH	MCAODC_12305	0.27	+1.0
2,438,653	-	yfgH	MCAODC_12305	0.27	-2.6
2,438,653	-	yfgH	MCAODC_12305	0.27	+0.7
2,438,676	-	yfgH	MCAODC_12305	0.32	-1.2
2,438,676	-	yfgH	MCAODC_12305	0.32	-0.3
2,438,695	+	yfgH	MCAODC_12305	0.35	+0.7
2,438,696	-	yfgH	MCAODC_12305	0.35	-0.4
2,438,931	+	yfgH	MCAODC_12305	0.81	+0.4
2,439,045	-				+0.0
2,439,430	+	yfgG	MCAODC_12310	0.51	-1.1
2,439,431	-	yfgG	MCAODC_12310	0.51	-1.3
2,439,435	-	yfgG	MCAODC_12310	0.53	-0.3
2,439,472	-	yfgG	MCAODC_12310	0.75	-3.1