Strain Fitness in Escherichia coli ECRC101 around MCAODC_04655
Experiment: GB_Bas36
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | GB_Bas36 |
|---|---|---|---|---|---|
| remove | |||||
| 943,285 | - | +0.5 | |||
| 943,379 | + | MCAODC_04655 | 0.47 | -1.4 | |
| 943,467 | + | -2.6 | |||
| 943,471 | - | -0.9 | |||
| 943,480 | - | -0.1 | |||
| 943,507 | + | -0.8 | |||
| 943,583 | + | +0.5 | |||
| 943,661 | + | -3.2 | |||
| 943,666 | + | -0.0 | |||
| 943,666 | + | -1.1 | |||
| 943,686 | - | +0.4 | |||
| 943,729 | + | yihG | MCAODC_04660 | 0.14 | +1.0 |
| 943,729 | + | yihG | MCAODC_04660 | 0.14 | +0.7 |
| 943,730 | - | yihG | MCAODC_04660 | 0.14 | -1.0 |
| 943,735 | + | yihG | MCAODC_04660 | 0.15 | -3.2 |
| 943,735 | + | yihG | MCAODC_04660 | 0.15 | +0.2 |
| 943,735 | + | yihG | MCAODC_04660 | 0.15 | -0.9 |
| 943,735 | + | yihG | MCAODC_04660 | 0.15 | -1.5 |
| 943,736 | - | yihG | MCAODC_04660 | 0.15 | +0.7 |
| 943,781 | + | yihG | MCAODC_04660 | 0.20 | -0.7 |
| 943,781 | + | yihG | MCAODC_04660 | 0.20 | +0.5 |
| 943,782 | - | yihG | MCAODC_04660 | 0.20 | -1.0 |
| 943,782 | - | yihG | MCAODC_04660 | 0.20 | +2.3 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | -0.3 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | +0.3 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | +0.3 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | -0.3 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | -0.6 |
| 943,788 | + | yihG | MCAODC_04660 | 0.21 | -1.8 |
| 943,789 | - | yihG | MCAODC_04660 | 0.21 | -1.1 |
| 943,789 | - | yihG | MCAODC_04660 | 0.21 | -2.7 |
| 943,789 | - | yihG | MCAODC_04660 | 0.21 | -0.2 |
| 943,789 | - | yihG | MCAODC_04660 | 0.21 | -0.6 |
| 943,789 | - | yihG | MCAODC_04660 | 0.21 | -1.4 |
| 943,813 | + | yihG | MCAODC_04660 | 0.23 | -2.4 |
| 943,814 | - | yihG | MCAODC_04660 | 0.23 | -0.3 |
| 943,816 | + | yihG | MCAODC_04660 | 0.24 | -0.8 |
| 943,816 | + | yihG | MCAODC_04660 | 0.24 | +0.2 |
| 943,867 | + | yihG | MCAODC_04660 | 0.29 | -0.9 |
| 943,867 | + | yihG | MCAODC_04660 | 0.29 | -0.1 |
| 943,868 | - | yihG | MCAODC_04660 | 0.29 | -2.4 |
| 943,868 | - | yihG | MCAODC_04660 | 0.29 | -2.0 |
| 943,872 | - | yihG | MCAODC_04660 | 0.30 | -0.8 |
| 943,893 | - | yihG | MCAODC_04660 | 0.32 | +1.0 |
| 943,893 | - | yihG | MCAODC_04660 | 0.32 | +1.4 |
| 943,893 | - | yihG | MCAODC_04660 | 0.32 | +0.2 |
| 943,898 | + | yihG | MCAODC_04660 | 0.32 | +0.2 |
| 943,898 | + | yihG | MCAODC_04660 | 0.32 | -2.8 |
| 943,899 | - | yihG | MCAODC_04660 | 0.32 | +0.4 |
| 943,899 | - | yihG | MCAODC_04660 | 0.32 | -0.7 |
| 943,899 | - | yihG | MCAODC_04660 | 0.32 | -0.2 |
| 943,907 | + | yihG | MCAODC_04660 | 0.33 | -0.7 |
| 943,907 | + | yihG | MCAODC_04660 | 0.33 | +0.2 |
| 943,908 | - | yihG | MCAODC_04660 | 0.33 | +1.3 |
| 943,919 | + | yihG | MCAODC_04660 | 0.35 | -0.9 |
| 943,919 | + | yihG | MCAODC_04660 | 0.35 | -0.4 |
| 943,920 | - | yihG | MCAODC_04660 | 0.35 | -0.0 |
| 943,964 | + | yihG | MCAODC_04660 | 0.39 | -2.0 |
| 944,031 | - | yihG | MCAODC_04660 | 0.47 | -2.5 |
| 944,031 | - | yihG | MCAODC_04660 | 0.47 | -0.2 |
| 944,031 | - | yihG | MCAODC_04660 | 0.47 | -0.4 |
| 944,040 | - | yihG | MCAODC_04660 | 0.48 | +1.3 |
| 944,050 | - | yihG | MCAODC_04660 | 0.49 | +0.5 |
| 944,061 | + | yihG | MCAODC_04660 | 0.50 | +0.2 |
| 944,061 | + | yihG | MCAODC_04660 | 0.50 | +0.1 |
| 944,061 | + | yihG | MCAODC_04660 | 0.50 | +1.4 |
| 944,062 | - | yihG | MCAODC_04660 | 0.50 | +2.6 |
| 944,065 | + | yihG | MCAODC_04660 | 0.50 | -1.3 |
| 944,065 | + | yihG | MCAODC_04660 | 0.50 | +0.5 |
| 944,065 | + | yihG | MCAODC_04660 | 0.50 | +0.1 |
| 944,066 | - | yihG | MCAODC_04660 | 0.50 | -0.1 |
| 944,068 | + | yihG | MCAODC_04660 | 0.51 | +1.0 |
| 944,068 | + | yihG | MCAODC_04660 | 0.51 | -0.0 |
| 944,090 | + | yihG | MCAODC_04660 | 0.53 | -0.8 |
| 944,091 | - | yihG | MCAODC_04660 | 0.53 | +1.3 |
| 944,264 | - | yihG | MCAODC_04660 | 0.72 | -0.1 |
| 944,271 | - | yihG | MCAODC_04660 | 0.72 | +1.1 |
| 944,297 | + | yihG | MCAODC_04660 | 0.75 | -1.6 |
| 944,298 | - | yihG | MCAODC_04660 | 0.75 | -0.7 |
| 944,298 | - | yihG | MCAODC_04660 | 0.75 | +1.0 |
| 944,298 | - | yihG | MCAODC_04660 | 0.75 | -1.8 |
| 944,319 | - | yihG | MCAODC_04660 | 0.77 | -0.5 |
| 944,339 | + | yihG | MCAODC_04660 | 0.80 | -1.3 |
| 944,340 | - | yihG | MCAODC_04660 | 0.80 | -1.3 |
| 944,340 | - | yihG | MCAODC_04660 | 0.80 | -1.5 |
| 944,371 | + | yihG | MCAODC_04660 | 0.83 | +0.5 |
| 944,371 | + | yihG | MCAODC_04660 | 0.83 | +0.2 |
| 944,372 | - | yihG | MCAODC_04660 | 0.83 | +0.5 |
| 944,372 | - | yihG | MCAODC_04660 | 0.83 | +1.2 |
| 944,391 | - | yihG | MCAODC_04660 | 0.85 | +0.3 |
| 944,404 | + | yihG | MCAODC_04660 | 0.87 | -0.1 |
| 944,404 | + | yihG | MCAODC_04660 | 0.87 | -0.8 |
| 944,416 | - | yihG | MCAODC_04660 | 0.88 | -0.8 |
| 944,416 | - | yihG | MCAODC_04660 | 0.88 | +1.3 |
Or see this region's nucleotide sequence