Strain Fitness in Pseudomonas sp. RS175 around PFR28_00992

Experiment: L-Glutamic (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (C) 10 mM
1,076,215	+		PFR28_00991	0.79	-0.4
1,076,215	+		PFR28_00991	0.79	-0.0
1,076,215	+		PFR28_00991	0.79	+0.4
1,076,215	+		PFR28_00991	0.79	-0.4
1,076,215	+		PFR28_00991	0.79	+0.1
1,076,216	-		PFR28_00991	0.79	-0.1
1,076,216	-		PFR28_00991	0.79	+0.1
1,076,216	-		PFR28_00991	0.79	+0.4
1,076,216	-		PFR28_00991	0.79	-0.1
1,076,216	-		PFR28_00991	0.79	-0.7
1,076,216	-		PFR28_00991	0.79	-0.7
1,076,216	-		PFR28_00991	0.79	+0.7
1,076,216	-		PFR28_00991	0.79	+0.1
1,076,216	-		PFR28_00991	0.79	-0.4
1,076,216	-		PFR28_00991	0.79	-0.1
1,076,216	-		PFR28_00991	0.79	-0.1
1,076,216	-		PFR28_00991	0.79	-0.9
1,076,336	-		PFR28_00991	0.83	-0.4
1,076,336	-		PFR28_00991	0.83	+0.4
1,076,398	+		PFR28_00991	0.85	+0.6
1,076,398	+		PFR28_00991	0.85	-0.1
1,076,399	-		PFR28_00991	0.85	-0.1
1,076,491	+		PFR28_00991	0.89	+0.0
1,076,491	+		PFR28_00991	0.89	-0.3
1,076,491	+		PFR28_00991	0.89	+0.3
1,076,492	-		PFR28_00991	0.89	-0.1
1,076,492	-		PFR28_00991	0.89	+0.4
1,076,492	-		PFR28_00991	0.89	-0.6
1,076,588	-				+0.4
1,076,626	+				-1.0
1,076,626	+				-0.1
1,076,626	+				-0.3
1,076,635	+				-0.5
1,076,635	+				-0.6
1,076,636	-				+0.4
1,076,717	-				-0.1
1,076,717	-				+0.7
1,076,781	+				+0.4
1,076,781	+				+0.6
1,076,782	-				-0.6
1,076,782	-				+0.1
1,076,782	-				-0.1
1,076,782	-				-1.1
1,076,782	-				-0.1
1,076,873	+				+0.9
1,076,873	+				-0.2
1,076,873	+				-0.3
1,076,874	-				+1.1
1,076,874	-				+0.5
1,076,874	-				+0.3
1,076,874	-				-0.8
1,076,874	-				-0.0
1,076,874	-				+0.6
1,076,874	-				+0.2
1,076,874	-				+0.5
1,076,876	+				+0.6
1,076,876	+				+0.4
1,076,876	+				+0.1
1,076,876	+				+0.4
1,076,876	+				-0.6
1,076,876	+				-1.0
1,076,876	+				-1.5
1,076,876	+				+0.4
1,076,877	-				-1.0
1,076,877	-				+0.5
1,076,877	-				+0.5
1,076,877	-				+0.4
1,076,877	-				+0.8
1,076,877	-				+0.1
1,076,877	-				-1.1
1,076,877	-				+0.3
1,076,880	+				-0.2
1,076,880	+				+1.4
1,076,888	+				-0.1
1,076,889	-				-0.3
1,077,065	-				+0.6
1,077,065	-				-0.2
1,077,217	+				+0.4
1,077,217	+				+0.3
1,077,217	+				-0.6
1,077,217	+				-0.6
1,077,217	+				+0.8
1,077,218	-				+0.4
1,077,218	-				-1.7
1,077,218	-				+0.5
1,077,218	-				+0.3
1,077,218	-				-0.2
1,077,405	-		PFR28_00992	0.14	+0.5
1,077,405	-		PFR28_00992	0.14	+0.2
1,077,405	-		PFR28_00992	0.14	+0.7
1,077,432	-		PFR28_00992	0.15	+1.6
1,077,545	+		PFR28_00992	0.18	+1.0
1,077,545	+		PFR28_00992	0.18	-0.1
1,077,546	-		PFR28_00992	0.18	+0.3
1,077,663	+		PFR28_00992	0.22	-0.2
1,077,670	+		PFR28_00992	0.22	+1.1
1,077,670	+		PFR28_00992	0.22	+0.1
1,077,670	+		PFR28_00992	0.22	-0.4
1,077,671	-		PFR28_00992	0.22	+1.1
1,077,726	+		PFR28_00992	0.23	+0.2
1,077,726	+		PFR28_00992	0.23	-0.6
1,077,726	+		PFR28_00992	0.23	+1.0
1,077,727	-		PFR28_00992	0.23	-1.5
1,077,727	-		PFR28_00992	0.23	-0.3
1,077,727	-		PFR28_00992	0.23	+1.0
1,077,727	-		PFR28_00992	0.23	-0.6
1,077,727	-		PFR28_00992	0.23	+0.7
1,077,810	+		PFR28_00992	0.26	+0.3
1,077,811	-		PFR28_00992	0.26	+0.9
1,077,811	-		PFR28_00992	0.26	+2.4
1,078,027	+		PFR28_00992	0.32	-0.3
1,078,027	+		PFR28_00992	0.32	+0.3
1,078,027	+		PFR28_00992	0.32	-0.7
1,078,027	+		PFR28_00992	0.32	+0.3
1,078,027	+		PFR28_00992	0.32	-0.2
1,078,027	+		PFR28_00992	0.32	+0.1
1,078,028	-		PFR28_00992	0.32	+1.4
1,078,028	-		PFR28_00992	0.32	-0.0
1,078,463	-		PFR28_00992	0.44	-0.1
1,078,463	-		PFR28_00992	0.44	-0.1
1,078,463	-		PFR28_00992	0.44	-0.5
1,078,463	-		PFR28_00992	0.44	+1.2
1,078,502	+		PFR28_00992	0.45	+0.7
1,078,502	+		PFR28_00992	0.45	+0.3
1,078,502	+		PFR28_00992	0.45	+1.3
1,078,503	-		PFR28_00992	0.45	-0.4
1,078,503	-		PFR28_00992	0.45	+0.5
1,078,581	-		PFR28_00992	0.47	-0.9
1,078,592	+		PFR28_00992	0.47	-0.1
1,078,593	-		PFR28_00992	0.47	+1.2
1,078,682	+		PFR28_00992	0.50	+0.2
1,078,682	+		PFR28_00992	0.50	+0.9
1,078,682	+		PFR28_00992	0.50	+0.6
1,078,682	+		PFR28_00992	0.50	+0.4
1,078,682	+		PFR28_00992	0.50	+0.4
1,078,683	-		PFR28_00992	0.50	+0.1
1,078,683	-		PFR28_00992	0.50	-1.4
1,078,683	-		PFR28_00992	0.50	+0.0
1,078,683	-		PFR28_00992	0.50	+0.7
1,078,683	-		PFR28_00992	0.50	+0.6
1,078,693	-		PFR28_00992	0.50	+1.4
1,078,693	-		PFR28_00992	0.50	+0.4
1,078,727	+		PFR28_00992	0.51	-0.4
1,078,727	+		PFR28_00992	0.51	+0.1
1,078,728	-		PFR28_00992	0.51	+0.6
1,078,728	-		PFR28_00992	0.51	+0.3
1,078,728	-		PFR28_00992	0.51	+0.8
1,078,829	+		PFR28_00992	0.54	-0.8
1,078,830	-		PFR28_00992	0.54	-1.2
1,078,830	-		PFR28_00992	0.54	-0.3
1,078,858	+		PFR28_00992	0.55	+0.9
1,078,858	+		PFR28_00992	0.55	-2.1
1,078,858	+		PFR28_00992	0.55	+2.7
1,078,858	+		PFR28_00992	0.55	+0.2
1,078,859	-		PFR28_00992	0.55	+0.1
1,078,859	-		PFR28_00992	0.55	+0.3
1,078,859	-		PFR28_00992	0.55	-1.2
1,078,901	+		PFR28_00992	0.56	-1.1
1,078,901	+		PFR28_00992	0.56	-0.9
1,078,901	+		PFR28_00992	0.56	-1.4
1,078,901	+		PFR28_00992	0.56	+0.6
1,078,901	+		PFR28_00992	0.56	+1.2
1,078,901	+		PFR28_00992	0.56	-0.1
1,078,901	+		PFR28_00992	0.56	+0.4
1,078,901	+		PFR28_00992	0.56	-0.8
1,078,901	+		PFR28_00992	0.56	+1.2
1,078,901	+		PFR28_00992	0.56	-0.5
1,078,901	+		PFR28_00992	0.56	-0.7
1,078,901	+		PFR28_00992	0.56	+1.1
1,078,901	+		PFR28_00992	0.56	-0.4
1,078,901	+		PFR28_00992	0.56	+0.5
1,078,901	+		PFR28_00992	0.56	+1.4
1,078,902	-		PFR28_00992	0.56	+0.2
1,078,902	-		PFR28_00992	0.56	+1.5
1,078,902	-		PFR28_00992	0.56	-0.9
1,078,902	-		PFR28_00992	0.56	+1.5
1,078,902	-		PFR28_00992	0.56	+0.4
1,078,902	-		PFR28_00992	0.56	-1.1
1,078,902	-		PFR28_00992	0.56	-0.5
1,078,902	-		PFR28_00992	0.56	-0.1
1,078,902	-		PFR28_00992	0.56	-0.1
1,078,902	-		PFR28_00992	0.56	+0.1
1,078,902	-		PFR28_00992	0.56	-0.3
1,078,902	-		PFR28_00992	0.56	-0.4
1,078,902	-		PFR28_00992	0.56	+0.7
1,078,902	-		PFR28_00992	0.56	+0.6
1,078,934	+		PFR28_00992	0.57	+0.1
1,078,935	-		PFR28_00992	0.57	-0.1
1,078,935	-		PFR28_00992	0.57	-0.9
1,078,935	-		PFR28_00992	0.57	-0.5
1,079,117	+		PFR28_00992	0.62	+1.0
1,079,117	+		PFR28_00992	0.62	-2.8
1,079,117	+		PFR28_00992	0.62	-0.6
1,079,118	-		PFR28_00992	0.62	+0.5
1,079,118	-		PFR28_00992	0.62	-0.9
1,079,118	-		PFR28_00992	0.62	+0.1
1,079,118	-		PFR28_00992	0.62	-0.1
1,079,118	-		PFR28_00992	0.62	-0.2
1,079,118	-		PFR28_00992	0.62	-0.4
1,079,118	-		PFR28_00992	0.62	-0.7
1,079,234	-		PFR28_00992	0.65	+1.0
1,079,351	+		PFR28_00992	0.68	-0.5
1,079,368	-		PFR28_00992	0.69	+0.9
1,079,524	+		PFR28_00992	0.73	-0.5
1,079,525	-		PFR28_00992	0.73	-0.6
1,079,641	+		PFR28_00992	0.76	-0.0
1,079,641	+		PFR28_00992	0.76	+0.0
1,079,641	+		PFR28_00992	0.76	+0.6
1,079,642	-		PFR28_00992	0.76	+0.3
1,079,661	-		PFR28_00992	0.77	-0.4
1,079,661	-		PFR28_00992	0.77	+0.6
1,079,661	-		PFR28_00992	0.77	-0.2
1,079,661	-		PFR28_00992	0.77	+0.5
1,079,661	-		PFR28_00992	0.77	-0.7
1,079,661	-		PFR28_00992	0.77	+0.2
1,079,661	-		PFR28_00992	0.77	+1.7
1,079,852	+		PFR28_00992	0.82	-0.4
1,079,852	+		PFR28_00992	0.82	-1.4
1,079,852	+		PFR28_00992	0.82	+0.9
1,079,852	+		PFR28_00992	0.82	+0.3
1,079,852	+		PFR28_00992	0.82	+1.0
1,079,852	+		PFR28_00992	0.82	+0.7
1,079,852	+		PFR28_00992	0.82	-0.5
1,079,852	+		PFR28_00992	0.82	+0.0
1,079,853	-		PFR28_00992	0.82	+3.1
1,079,853	-		PFR28_00992	0.82	-0.1
1,079,853	-		PFR28_00992	0.82	-0.2
1,079,853	-		PFR28_00992	0.82	-0.5
1,079,853	-		PFR28_00992	0.82	+1.7
1,079,853	-		PFR28_00992	0.82	+0.6
1,079,911	+		PFR28_00992	0.84	+0.1
1,079,911	+		PFR28_00992	0.84	-0.1
1,079,911	+		PFR28_00992	0.84	+0.0
1,079,912	-		PFR28_00992	0.84	-0.1
1,079,912	-		PFR28_00992	0.84	+1.4
1,079,912	-		PFR28_00992	0.84	-0.3
1,079,925	-		PFR28_00992	0.84	-0.9
1,079,933	+		PFR28_00992	0.84	+0.8
1,079,933	+		PFR28_00992	0.84	+0.6
1,079,934	-		PFR28_00992	0.84	-0.2
1,079,934	-		PFR28_00992	0.84	+0.5
1,079,934	-		PFR28_00992	0.84	+0.1
1,079,934	-		PFR28_00992	0.84	+0.3
1,079,943	+		PFR28_00992	0.85	-0.6
1,079,943	+		PFR28_00992	0.85	+0.8
1,079,943	+		PFR28_00992	0.85	-1.4
1,079,944	-		PFR28_00992	0.85	-0.2
1,079,944	-		PFR28_00992	0.85	-0.5
1,079,957	+		PFR28_00992	0.85	+0.1
1,079,987	+		PFR28_00992	0.86	-0.3
1,079,987	+		PFR28_00992	0.86	-0.1
1,079,987	+		PFR28_00992	0.86	-0.3
1,079,987	+		PFR28_00992	0.86	+0.5
1,079,987	+		PFR28_00992	0.86	-0.5
1,079,987	+		PFR28_00992	0.86	+0.5
1,079,988	-		PFR28_00992	0.86	-0.4
1,079,988	-		PFR28_00992	0.86	-0.2
1,079,993	+		PFR28_00992	0.86	-0.7
1,079,993	+		PFR28_00992	0.86	-0.4
1,079,993	+		PFR28_00992	0.86	+0.2
1,079,994	-		PFR28_00992	0.86	+0.6
1,080,083	+		PFR28_00992	0.89	-0.5
1,080,083	+		PFR28_00992	0.89	+0.8
1,080,083	+		PFR28_00992	0.89	-0.1
1,080,083	+		PFR28_00992	0.89	+0.9
1,080,083	+		PFR28_00992	0.89	-0.2
1,080,083	+		PFR28_00992	0.89	+0.4
1,080,084	-		PFR28_00992	0.89	+0.4
1,080,084	-		PFR28_00992	0.89	-0.8
1,080,084	-		PFR28_00992	0.89	+0.6
1,080,084	-		PFR28_00992	0.89	+0.3
1,080,084	-		PFR28_00992	0.89	-1.2
1,080,084	-		PFR28_00992	0.89	+0.3
1,080,266	+				-1.1
1,080,267	-				-0.2
1,080,302	+				+0.4
1,080,416	+				-0.1
1,080,417	-				-0.4
1,080,417	-				-0.1
1,080,417	-				-0.1
1,080,417	-				-0.0
1,080,417	-				+0.6
1,080,417	-				+0.4
1,080,460	+				+0.3
1,080,460	+				+0.0
1,080,460	+				+0.2
1,080,460	+				+0.0
1,080,460	+				-0.9
1,080,461	-				-0.5
1,080,461	-				-0.4
1,080,461	-				-0.5
1,080,461	-				-0.4
1,080,461	-				-1.5
1,080,461	-				+0.6
1,080,461	-				+0.1
1,080,461	-				-0.1
1,080,461	-				+0.3
1,080,461	-				+0.2
1,080,475	+				-0.1
1,080,476	-				-0.5
1,080,549	+				+0.8
1,080,679	+		PFR28_00993	0.26	-0.0
1,080,777	-		PFR28_00993	0.41	+0.1
1,080,782	+		PFR28_00993	0.42	-0.5
1,080,782	+		PFR28_00993	0.42	+0.9
1,080,845	+		PFR28_00993	0.52	+0.0
1,080,846	-		PFR28_00993	0.52	+0.6
1,081,057	+		PFR28_00993	0.86	-0.5
1,081,068	-		PFR28_00993	0.88	+0.3
1,081,068	-		PFR28_00993	0.88	-0.6
1,081,068	-		PFR28_00993	0.88	+1.3
1,081,084	+				+0.6
1,081,084	+				-0.6
1,081,085	-				+0.1
1,081,171	-				+0.4
1,081,171	-				-0.7
1,081,184	+				-0.9
1,081,194	-				+1.0
1,081,231	+				+0.0
1,081,271	-				-0.7
1,081,278	-				-0.1
1,081,362	+				+0.6
1,081,362	+				+0.2
1,081,385	+				-1.1
1,081,388	+				+0.2
1,081,458	+				+0.4
1,081,458	+				-0.5
1,081,458	+				+0.3
1,081,458	+				-0.9
1,081,458	+				+0.1
1,081,459	-				-0.0
1,081,459	-				-0.4
1,081,459	-				-0.4