Strain Fitness in Escherichia coli ECRC98 around JDDGAC_20405

Experiment: WM_Bas10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas10
3,908,446	+	ugpB	JDDGAC_20400	0.34	-0.0
3,908,449	+	ugpB	JDDGAC_20400	0.34	+0.3
3,908,450	-	ugpB	JDDGAC_20400	0.34	-0.5
3,908,480	+	ugpB	JDDGAC_20400	0.36	-1.5
3,908,524	+	ugpB	JDDGAC_20400	0.40	+0.3
3,908,538	-	ugpB	JDDGAC_20400	0.41	-0.5
3,908,604	+	ugpB	JDDGAC_20400	0.46	-1.5
3,908,744	-	ugpB	JDDGAC_20400	0.56	+0.2
3,908,779	+	ugpB	JDDGAC_20400	0.59	+1.6
3,908,779	+	ugpB	JDDGAC_20400	0.59	-1.0
3,908,779	+	ugpB	JDDGAC_20400	0.59	+0.0
3,908,780	-	ugpB	JDDGAC_20400	0.59	-0.9
3,908,797	-	ugpB	JDDGAC_20400	0.60	-2.0
3,908,854	+	ugpB	JDDGAC_20400	0.65	-0.7
3,908,854	+	ugpB	JDDGAC_20400	0.65	-0.2
3,908,855	-	ugpB	JDDGAC_20400	0.65	-0.7
3,908,855	-	ugpB	JDDGAC_20400	0.65	+0.5
3,908,875	+	ugpB	JDDGAC_20400	0.66	-1.1
3,908,963	-	ugpB	JDDGAC_20400	0.73	+0.8
3,909,062	-	ugpB	JDDGAC_20400	0.80	-0.5
3,909,062	-	ugpB	JDDGAC_20400	0.80	+1.1
3,909,062	-	ugpB	JDDGAC_20400	0.80	+0.3
3,909,135	+	ugpB	JDDGAC_20400	0.86	-0.1
3,909,325	+				-1.4
3,909,414	+				-0.9
3,909,414	+				+0.5
3,909,459	-				-0.5
3,909,503	-				-0.3
3,909,503	-				+1.3
3,909,614	+	ugpA	JDDGAC_20405	0.22	-1.9
3,909,614	+	ugpA	JDDGAC_20405	0.22	-2.2
3,909,614	+	ugpA	JDDGAC_20405	0.22	+1.9
3,909,614	+	ugpA	JDDGAC_20405	0.22	-0.1
3,909,614	+	ugpA	JDDGAC_20405	0.22	+1.6
3,909,614	+	ugpA	JDDGAC_20405	0.22	+0.5
3,909,614	+	ugpA	JDDGAC_20405	0.22	+1.4
3,909,614	+	ugpA	JDDGAC_20405	0.22	+1.0
3,909,615	-	ugpA	JDDGAC_20405	0.22	-0.4
3,909,615	-	ugpA	JDDGAC_20405	0.22	+1.3
3,909,615	-	ugpA	JDDGAC_20405	0.22	-0.2
3,909,615	-	ugpA	JDDGAC_20405	0.22	-0.4
3,909,615	-	ugpA	JDDGAC_20405	0.22	+1.1
3,909,617	+	ugpA	JDDGAC_20405	0.23	+0.6
3,909,617	+	ugpA	JDDGAC_20405	0.23	+0.4
3,909,618	-	ugpA	JDDGAC_20405	0.23	+0.4
3,909,618	-	ugpA	JDDGAC_20405	0.23	-0.6
3,909,618	-	ugpA	JDDGAC_20405	0.23	-2.1
3,909,618	-	ugpA	JDDGAC_20405	0.23	+0.8
3,909,710	+	ugpA	JDDGAC_20405	0.33	-1.6
3,909,735	-	ugpA	JDDGAC_20405	0.36	-0.5
3,909,912	+	ugpA	JDDGAC_20405	0.56	-0.5
3,909,913	-	ugpA	JDDGAC_20405	0.56	+1.0
3,909,930	-	ugpA	JDDGAC_20405	0.58	-0.5
3,909,930	-	ugpA	JDDGAC_20405	0.58	+1.1
3,909,930	-	ugpA	JDDGAC_20405	0.58	+1.3
3,909,947	+	ugpA	JDDGAC_20405	0.60	+0.3
3,910,028	-	ugpA	JDDGAC_20405	0.69	+0.6
3,910,028	-	ugpA	JDDGAC_20405	0.69	-3.3
3,910,028	-	ugpA	JDDGAC_20405	0.69	-0.9
3,910,074	+	ugpA	JDDGAC_20405	0.74	+1.0
3,910,089	-	ugpA	JDDGAC_20405	0.76	+0.7
3,910,089	-	ugpA	JDDGAC_20405	0.76	+0.2
3,910,089	-	ugpA	JDDGAC_20405	0.76	-0.0
3,910,156	+	ugpA	JDDGAC_20405	0.83	-0.7
3,910,156	+	ugpA	JDDGAC_20405	0.83	+0.7
3,910,156	+	ugpA	JDDGAC_20405	0.83	-0.4
3,910,156	+	ugpA	JDDGAC_20405	0.83	-0.6
3,910,157	-	ugpA	JDDGAC_20405	0.83	+0.7
3,910,166	+	ugpA	JDDGAC_20405	0.84	-0.8
3,910,167	-	ugpA	JDDGAC_20405	0.85	+0.2
3,910,175	+	ugpA	JDDGAC_20405	0.85	+0.4
3,910,175	+	ugpA	JDDGAC_20405	0.85	+0.8
3,910,275	-				+0.7
3,910,329	-				+0.0
3,910,339	-				+0.4
3,910,371	-				+1.8
3,910,381	+				+0.3
3,910,381	+				-0.4
3,910,381	+				-0.6
3,910,382	-				+0.2
3,910,382	-				+0.3
3,910,533	+	ugpE	JDDGAC_20410	0.28	+0.4
3,910,534	-	ugpE	JDDGAC_20410	0.28	+0.1
3,910,561	-	ugpE	JDDGAC_20410	0.31	-0.2
3,910,679	+	ugpE	JDDGAC_20410	0.45	-0.1
3,910,680	-	ugpE	JDDGAC_20410	0.45	-1.0
3,910,680	-	ugpE	JDDGAC_20410	0.45	+0.3
3,910,683	+	ugpE	JDDGAC_20410	0.45	+1.3
3,910,683	+	ugpE	JDDGAC_20410	0.45	+0.1
3,910,683	+	ugpE	JDDGAC_20410	0.45	-1.2
3,910,683	+	ugpE	JDDGAC_20410	0.45	-0.1
3,910,684	-	ugpE	JDDGAC_20410	0.45	-0.0
3,910,684	-	ugpE	JDDGAC_20410	0.45	+0.2
3,910,684	-	ugpE	JDDGAC_20410	0.45	-0.4
3,910,733	-	ugpE	JDDGAC_20410	0.51	-1.5
3,910,743	-	ugpE	JDDGAC_20410	0.52	+0.8
3,910,743	-	ugpE	JDDGAC_20410	0.52	+1.2
3,910,743	-	ugpE	JDDGAC_20410	0.52	-0.4
3,910,923	+	ugpE	JDDGAC_20410	0.74	-0.4
3,910,924	-	ugpE	JDDGAC_20410	0.74	+0.8
3,910,924	-	ugpE	JDDGAC_20410	0.74	-0.3
3,910,924	-	ugpE	JDDGAC_20410	0.74	+0.3
3,910,927	+	ugpE	JDDGAC_20410	0.74	+0.8
3,910,943	-	ugpE	JDDGAC_20410	0.76	+0.1
3,910,963	-	ugpE	JDDGAC_20410	0.78	-2.5
3,911,097	-				+0.2
3,911,143	+				-1.0
3,911,144	-				-2.3
3,911,173	-				+0.2