Strain Fitness in Escherichia coli ECRC101 around MCAODC_06830

Experiment: WM_JK45

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_JK45
1,387,246	-				-0.1
1,387,305	-				-0.1
1,387,306	+				-0.1
1,387,319	+				-2.4
1,387,319	+				-0.3
1,387,320	-				+0.6
1,387,409	+	hdeA	MCAODC_06820	0.26	-0.2
1,387,514	+	hdeA	MCAODC_06820	0.57	-0.8
1,387,515	-	hdeA	MCAODC_06820	0.58	+2.2
1,387,535	-	hdeA	MCAODC_06820	0.64	+0.8
1,387,569	-	hdeA	MCAODC_06820	0.74	+0.1
1,387,583	+	hdeA	MCAODC_06820	0.78	+0.1
1,387,584	-	hdeA	MCAODC_06820	0.78	+0.0
1,387,584	-	hdeA	MCAODC_06820	0.78	+0.1
1,387,613	+	hdeA	MCAODC_06820	0.87	+0.2
1,387,649	+				+0.5
1,387,725	+				+0.6
1,387,726	-				-0.2
1,387,745	-				+0.4
1,387,878	+	hdeB	MCAODC_06825	0.35	+0.9
1,387,879	-	hdeB	MCAODC_06825	0.35	-0.3
1,387,958	+	hdeB	MCAODC_06825	0.59	+0.1
1,387,960	+	hdeB	MCAODC_06825	0.59	+0.6
1,387,960	+	hdeB	MCAODC_06825	0.59	-0.1
1,387,960	+	hdeB	MCAODC_06825	0.59	+0.9
1,387,960	+	hdeB	MCAODC_06825	0.59	+0.1
1,387,962	+	hdeB	MCAODC_06825	0.60	+0.7
1,387,963	-	hdeB	MCAODC_06825	0.60	+1.2
1,387,963	-	hdeB	MCAODC_06825	0.60	+2.8
1,387,963	-	hdeB	MCAODC_06825	0.60	-0.3
1,387,974	+	hdeB	MCAODC_06825	0.63	-0.9
1,387,981	-	hdeB	MCAODC_06825	0.65	-0.4
1,388,027	-	hdeB	MCAODC_06825	0.79	+1.8
1,388,027	-	hdeB	MCAODC_06825	0.79	+0.3
1,388,059	-	hdeB	MCAODC_06825	0.88	-0.1
1,388,059	-	hdeB	MCAODC_06825	0.88	-2.4
1,388,079	+				-0.1
1,388,103	+				+0.6
1,388,180	+				+0.5
1,388,189	+				+0.2
1,388,189	+				-0.2
1,388,190	-				-1.3
1,388,270	+				+0.7
1,388,271	-				-0.9
1,388,296	-	yhiD	MCAODC_06830	0.11	-2.7
1,388,296	-	yhiD	MCAODC_06830	0.11	-0.3
1,388,433	+	yhiD	MCAODC_06830	0.35	-2.0
1,388,434	-	yhiD	MCAODC_06830	0.35	-0.3
1,388,434	-	yhiD	MCAODC_06830	0.35	+1.4
1,388,434	-	yhiD	MCAODC_06830	0.35	-0.3
1,388,438	+	yhiD	MCAODC_06830	0.36	-0.3
1,388,460	+	yhiD	MCAODC_06830	0.39	+0.6
1,388,481	-	yhiD	MCAODC_06830	0.43	-0.7
1,388,481	-	yhiD	MCAODC_06830	0.43	+0.1
1,388,484	+	yhiD	MCAODC_06830	0.44	+0.3
1,388,484	+	yhiD	MCAODC_06830	0.44	-0.3
1,388,484	+	yhiD	MCAODC_06830	0.44	-0.3
1,388,485	-	yhiD	MCAODC_06830	0.44	+0.3
1,388,485	-	yhiD	MCAODC_06830	0.44	-0.8
1,388,485	-	yhiD	MCAODC_06830	0.44	+0.8
1,388,485	-	yhiD	MCAODC_06830	0.44	-1.7
1,388,503	-	yhiD	MCAODC_06830	0.47	-0.3
1,388,503	-	yhiD	MCAODC_06830	0.47	+0.4
1,388,503	-	yhiD	MCAODC_06830	0.47	-0.6
1,388,506	+	yhiD	MCAODC_06830	0.47	-0.3
1,388,507	-	yhiD	MCAODC_06830	0.48	-0.5
1,388,507	-	yhiD	MCAODC_06830	0.48	-0.7
1,388,521	+	yhiD	MCAODC_06830	0.50	-1.0
1,388,521	+	yhiD	MCAODC_06830	0.50	-0.2
1,388,522	-	yhiD	MCAODC_06830	0.50	-1.2
1,388,567	+	yhiD	MCAODC_06830	0.58	+0.1
1,388,600	+	yhiD	MCAODC_06830	0.64	-0.4
1,388,601	-	yhiD	MCAODC_06830	0.64	+0.0
1,388,623	-	yhiD	MCAODC_06830	0.68	-0.6
1,388,625	+	yhiD	MCAODC_06830	0.68	+0.5
1,388,748	-	yhiD	MCAODC_06830	0.89	-1.4
1,388,775	+				+0.0
1,388,776	-				+1.0
1,388,807	-				-0.7
1,388,815	+				-2.8
1,388,820	-				-0.1
1,388,823	+				+0.5
1,388,824	-				+0.2
1,388,862	-				+3.5
1,388,904	+				-0.7
1,388,904	+				+0.1
1,388,904	+				+0.1
1,388,908	+				+0.4
1,388,957	-	chuV	MCAODC_06835	0.13	+0.2
1,389,001	+	chuV	MCAODC_06835	0.18	+1.8
1,389,004	+	chuV	MCAODC_06835	0.19	+0.1
1,389,004	+	chuV	MCAODC_06835	0.19	-0.6
1,389,004	+	chuV	MCAODC_06835	0.19	+0.1
1,389,005	-	chuV	MCAODC_06835	0.19	+0.3
1,389,005	-	chuV	MCAODC_06835	0.19	-1.0
1,389,020	+	chuV	MCAODC_06835	0.21	-0.4
1,389,020	+	chuV	MCAODC_06835	0.21	-1.0
1,389,082	+	chuV	MCAODC_06835	0.29	-0.9
1,389,082	+	chuV	MCAODC_06835	0.29	+0.5
1,389,083	-	chuV	MCAODC_06835	0.29	+0.5
1,389,083	-	chuV	MCAODC_06835	0.29	-0.6
1,389,083	-	chuV	MCAODC_06835	0.29	+0.3
1,389,091	+	chuV	MCAODC_06835	0.30	-0.4
1,389,092	-	chuV	MCAODC_06835	0.30	+0.1
1,389,123	+	chuV	MCAODC_06835	0.34	-0.6
1,389,154	+	chuV	MCAODC_06835	0.38	+0.7
1,389,155	-	chuV	MCAODC_06835	0.38	-0.5
1,389,277	+	chuV	MCAODC_06835	0.54	-0.3
1,389,277	+	chuV	MCAODC_06835	0.54	-0.3
1,389,278	-	chuV	MCAODC_06835	0.54	-0.7
1,389,278	-	chuV	MCAODC_06835	0.54	-0.5
1,389,278	-	chuV	MCAODC_06835	0.54	-0.0
1,389,286	+	chuV	MCAODC_06835	0.55	+0.8
1,389,312	+	chuV	MCAODC_06835	0.59	+0.4
1,389,318	+	chuV	MCAODC_06835	0.59	+0.2
1,389,318	+	chuV	MCAODC_06835	0.59	-0.0
1,389,355	+	chuV	MCAODC_06835	0.64	-0.2
1,389,356	-	chuV	MCAODC_06835	0.64	+0.4
1,389,381	+	chuV	MCAODC_06835	0.68	+0.4
1,389,381	+	chuV	MCAODC_06835	0.68	+0.1
1,389,436	+	chuV	MCAODC_06835	0.75	-0.4
1,389,436	+	chuV	MCAODC_06835	0.75	+0.5
1,389,445	-	chuV	MCAODC_06835	0.76	+0.9
1,389,447	+	chuV	MCAODC_06835	0.76	+0.6
1,389,447	+	chuV	MCAODC_06835	0.76	+0.0
1,389,483	-	chuV	MCAODC_06835	0.81	-1.4
1,389,576	+				+1.4
1,389,577	-				+0.4
1,389,577	-				-0.9
1,389,603	+				+0.4
1,389,603	+				-0.5
1,389,604	-				-0.9
1,389,605	+				+0.8
1,389,662	+				+0.0
1,389,663	-				-0.0
1,389,693	+				-2.2
1,389,694	-				-3.6
1,389,720	+				-0.4
1,389,720	+				-0.6
1,389,721	-				-1.4
1,389,757	-	chuU	MCAODC_06840	0.14	-0.9