Strain Fitness in Escherichia coli ECRC101 around MCAODC_26805

Experiment: Control_ECRC101_WM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntentS and fepD are separated by 110 nucleotidesfepD and fepG overlap by 4 nucleotidesfepG and fepC overlap by 4 nucleotides MCAODC_26800: entS - enterobactin exporter, iron-regulated, at 2,075,587 to 2,076,837 entS MCAODC_26805: fepD - ferrienterobactin ABC transporter permease, at 2,076,948 to 2,077,952 fepD MCAODC_26810: fepG - iron-enterobactin ABC transporter permease, at 2,077,949 to 2,078,941 fepG MCAODC_26815: fepC - ferrienterobactin ABC transporter ATPase, at 2,078,938 to 2,079,753 fepC Position (kb) 2076 2077 2078Strain fitness (log2 ratio) -2 -1 0 1 2at 2076.256 kb on + strand, within entSat 2076.256 kb on + strand, within entSat 2076.257 kb on - strand, within entSat 2076.273 kb on + strand, within entSat 2076.274 kb on - strand, within entSat 2076.276 kb on + strand, within entSat 2076.277 kb on - strand, within entSat 2076.303 kb on - strand, within entSat 2076.303 kb on - strand, within entSat 2076.335 kb on - strand, within entSat 2076.493 kb on + strand, within entSat 2076.494 kb on - strand, within entSat 2076.497 kb on + strand, within entSat 2076.498 kb on - strand, within entSat 2076.498 kb on - strand, within entSat 2076.839 kb on - strandat 2076.839 kb on - strandat 2076.868 kb on - strandat 2076.868 kb on - strandat 2076.868 kb on - strandat 2076.871 kb on + strandat 2076.891 kb on + strandat 2076.891 kb on + strandat 2076.947 kb on + strandat 2077.001 kb on - strandat 2077.024 kb on + strandat 2077.025 kb on - strandat 2077.025 kb on - strandat 2077.137 kb on - strand, within fepDat 2077.288 kb on - strand, within fepDat 2077.477 kb on - strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.525 kb on + strand, within fepDat 2077.526 kb on - strand, within fepDat 2077.526 kb on - strand, within fepDat 2077.526 kb on - strand, within fepDat 2077.526 kb on - strand, within fepDat 2077.529 kb on + strand, within fepDat 2077.530 kb on - strand, within fepDat 2077.534 kb on + strand, within fepDat 2077.580 kb on - strand, within fepDat 2077.582 kb on + strand, within fepDat 2077.804 kb on + strand, within fepDat 2077.811 kb on + strand, within fepDat 2077.895 kb on + strandat 2077.955 kb on + strandat 2077.972 kb on - strandat 2078.017 kb on + strandat 2078.064 kb on + strand, within fepGat 2078.098 kb on + strand, within fepGat 2078.227 kb on - strand, within fepGat 2078.237 kb on - strand, within fepGat 2078.392 kb on + strand, within fepGat 2078.393 kb on - strand, within fepGat 2078.548 kb on + strand, within fepGat 2078.548 kb on + strand, within fepGat 2078.548 kb on + strand, within fepGat 2078.548 kb on + strand, within fepGat 2078.548 kb on + strand, within fepGat 2078.549 kb on - strand, within fepGat 2078.550 kb on + strand, within fepGat 2078.550 kb on + strand, within fepGat 2078.550 kb on + strand, within fepGat 2078.559 kb on + strand, within fepGat 2078.758 kb on + strand, within fepGat 2078.849 kb on - strandat 2078.900 kb on + strandat 2078.900 kb on + strandat 2078.901 kb on - strandat 2078.906 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_ECRC101_WM
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2,076,256 + entS MCAODC_26800 0.53 +1.1
2,076,256 + entS MCAODC_26800 0.53 +0.5
2,076,257 - entS MCAODC_26800 0.54 -0.1
2,076,273 + entS MCAODC_26800 0.55 +1.0
2,076,274 - entS MCAODC_26800 0.55 -0.8
2,076,276 + entS MCAODC_26800 0.55 +0.1
2,076,277 - entS MCAODC_26800 0.55 +0.2
2,076,303 - entS MCAODC_26800 0.57 +0.1
2,076,303 - entS MCAODC_26800 0.57 -0.6
2,076,335 - entS MCAODC_26800 0.60 +0.4
2,076,493 + entS MCAODC_26800 0.72 +0.7
2,076,494 - entS MCAODC_26800 0.73 -0.6
2,076,497 + entS MCAODC_26800 0.73 +1.5
2,076,498 - entS MCAODC_26800 0.73 +0.8
2,076,498 - entS MCAODC_26800 0.73 +0.3
2,076,839 - +2.1
2,076,839 - -0.5
2,076,868 - -0.3
2,076,868 - +1.7
2,076,868 - +0.5
2,076,871 + -0.7
2,076,891 + +1.2
2,076,891 + +0.4
2,076,947 + +0.3
2,077,001 - -1.6
2,077,024 + -1.4
2,077,025 - +0.1
2,077,025 - +0.5
2,077,137 - fepD MCAODC_26805 0.19 -2.5
2,077,288 - fepD MCAODC_26805 0.34 -1.3
2,077,477 - fepD MCAODC_26805 0.53 -2.1
2,077,525 + fepD MCAODC_26805 0.57 -0.8
2,077,525 + fepD MCAODC_26805 0.57 -0.9
2,077,525 + fepD MCAODC_26805 0.57 -0.3
2,077,525 + fepD MCAODC_26805 0.57 +0.8
2,077,525 + fepD MCAODC_26805 0.57 -1.0
2,077,525 + fepD MCAODC_26805 0.57 -1.4
2,077,525 + fepD MCAODC_26805 0.57 -0.9
2,077,526 - fepD MCAODC_26805 0.58 -0.6
2,077,526 - fepD MCAODC_26805 0.58 -0.3
2,077,526 - fepD MCAODC_26805 0.58 +0.3
2,077,526 - fepD MCAODC_26805 0.58 +0.1
2,077,529 + fepD MCAODC_26805 0.58 -0.1
2,077,530 - fepD MCAODC_26805 0.58 -0.1
2,077,534 + fepD MCAODC_26805 0.58 -1.1
2,077,580 - fepD MCAODC_26805 0.63 -0.6
2,077,582 + fepD MCAODC_26805 0.63 -0.5
2,077,804 + fepD MCAODC_26805 0.85 -1.9
2,077,811 + fepD MCAODC_26805 0.86 +0.4
2,077,895 + -1.2
2,077,955 + +0.4
2,077,972 - +2.2
2,078,017 + -1.6
2,078,064 + fepG MCAODC_26810 0.12 +0.2
2,078,098 + fepG MCAODC_26810 0.15 -1.6
2,078,227 - fepG MCAODC_26810 0.28 -0.7
2,078,237 - fepG MCAODC_26810 0.29 -0.2
2,078,392 + fepG MCAODC_26810 0.45 -0.1
2,078,393 - fepG MCAODC_26810 0.45 -0.7
2,078,548 + fepG MCAODC_26810 0.60 -1.0
2,078,548 + fepG MCAODC_26810 0.60 -1.5
2,078,548 + fepG MCAODC_26810 0.60 -0.0
2,078,548 + fepG MCAODC_26810 0.60 -2.6
2,078,548 + fepG MCAODC_26810 0.60 +0.1
2,078,549 - fepG MCAODC_26810 0.60 -0.4
2,078,550 + fepG MCAODC_26810 0.61 -1.5
2,078,550 + fepG MCAODC_26810 0.61 +0.3
2,078,550 + fepG MCAODC_26810 0.61 -1.4
2,078,559 + fepG MCAODC_26810 0.61 -0.3
2,078,758 + fepG MCAODC_26810 0.81 -0.4
2,078,849 - +0.5
2,078,900 + +2.2
2,078,900 + +0.9
2,078,901 - +0.2
2,078,906 - +0.4

Or see this region's nucleotide sequence