Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt entS and fepD are separated by 110 nucleotides fepD and fepG overlap by 4 nucleotides fepG and fepC overlap by 4 nucleotides
MCAODC_26800: entS - enterobactin exporter, iron-regulated, at 2,075,587 to 2,076,837
entS
MCAODC_26805: fepD - ferrienterobactin ABC transporter permease, at 2,076,948 to 2,077,952
fepD
MCAODC_26810: fepG - iron-enterobactin ABC transporter permease, at 2,077,949 to 2,078,941
fepG
MCAODC_26815: fepC - ferrienterobactin ABC transporter ATPase, at 2,078,938 to 2,079,753
fepC
Position (kb)
2076
2077
2078 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2076.256 kb on + strand, within entS at 2076.256 kb on + strand, within entS at 2076.257 kb on - strand, within entS at 2076.273 kb on + strand, within entS at 2076.274 kb on - strand, within entS at 2076.276 kb on + strand, within entS at 2076.277 kb on - strand, within entS at 2076.303 kb on - strand, within entS at 2076.303 kb on - strand, within entS at 2076.335 kb on - strand, within entS at 2076.493 kb on + strand, within entS at 2076.494 kb on - strand, within entS at 2076.497 kb on + strand, within entS at 2076.498 kb on - strand, within entS at 2076.498 kb on - strand, within entS at 2076.839 kb on - strand at 2076.839 kb on - strand at 2076.868 kb on - strand at 2076.868 kb on - strand at 2076.868 kb on - strand at 2076.871 kb on + strand at 2076.891 kb on + strand at 2076.891 kb on + strand at 2076.947 kb on + strand at 2077.001 kb on - strand at 2077.024 kb on + strand at 2077.025 kb on - strand at 2077.025 kb on - strand at 2077.137 kb on - strand, within fepD at 2077.288 kb on - strand, within fepD at 2077.477 kb on - strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.525 kb on + strand, within fepD at 2077.526 kb on - strand, within fepD at 2077.526 kb on - strand, within fepD at 2077.526 kb on - strand, within fepD at 2077.526 kb on - strand, within fepD at 2077.529 kb on + strand, within fepD at 2077.530 kb on - strand, within fepD at 2077.534 kb on + strand, within fepD at 2077.580 kb on - strand, within fepD at 2077.582 kb on + strand, within fepD at 2077.804 kb on + strand, within fepD at 2077.811 kb on + strand, within fepD at 2077.895 kb on + strand at 2077.955 kb on + strand at 2077.972 kb on - strand at 2078.017 kb on + strand at 2078.064 kb on + strand, within fepG at 2078.098 kb on + strand, within fepG at 2078.227 kb on - strand, within fepG at 2078.237 kb on - strand, within fepG at 2078.392 kb on + strand, within fepG at 2078.393 kb on - strand, within fepG at 2078.548 kb on + strand, within fepG at 2078.548 kb on + strand, within fepG at 2078.548 kb on + strand, within fepG at 2078.548 kb on + strand, within fepG at 2078.548 kb on + strand, within fepG at 2078.549 kb on - strand, within fepG at 2078.550 kb on + strand, within fepG at 2078.550 kb on + strand, within fepG at 2078.550 kb on + strand, within fepG at 2078.559 kb on + strand, within fepG at 2078.758 kb on + strand, within fepG at 2078.849 kb on - strand at 2078.900 kb on + strand at 2078.900 kb on + strand at 2078.901 kb on - strand at 2078.906 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 2,076,256 + entS MCAODC_26800 0.53 +1.1 2,076,256 + entS MCAODC_26800 0.53 +0.5 2,076,257 - entS MCAODC_26800 0.54 -0.1 2,076,273 + entS MCAODC_26800 0.55 +1.0 2,076,274 - entS MCAODC_26800 0.55 -0.8 2,076,276 + entS MCAODC_26800 0.55 +0.1 2,076,277 - entS MCAODC_26800 0.55 +0.2 2,076,303 - entS MCAODC_26800 0.57 +0.1 2,076,303 - entS MCAODC_26800 0.57 -0.6 2,076,335 - entS MCAODC_26800 0.60 +0.4 2,076,493 + entS MCAODC_26800 0.72 +0.7 2,076,494 - entS MCAODC_26800 0.73 -0.6 2,076,497 + entS MCAODC_26800 0.73 +1.5 2,076,498 - entS MCAODC_26800 0.73 +0.8 2,076,498 - entS MCAODC_26800 0.73 +0.3 2,076,839 - +2.1 2,076,839 - -0.5 2,076,868 - -0.3 2,076,868 - +1.7 2,076,868 - +0.5 2,076,871 + -0.7 2,076,891 + +1.2 2,076,891 + +0.4 2,076,947 + +0.3 2,077,001 - -1.6 2,077,024 + -1.4 2,077,025 - +0.1 2,077,025 - +0.5 2,077,137 - fepD MCAODC_26805 0.19 -2.5 2,077,288 - fepD MCAODC_26805 0.34 -1.3 2,077,477 - fepD MCAODC_26805 0.53 -2.1 2,077,525 + fepD MCAODC_26805 0.57 -0.8 2,077,525 + fepD MCAODC_26805 0.57 -0.9 2,077,525 + fepD MCAODC_26805 0.57 -0.3 2,077,525 + fepD MCAODC_26805 0.57 +0.8 2,077,525 + fepD MCAODC_26805 0.57 -1.0 2,077,525 + fepD MCAODC_26805 0.57 -1.4 2,077,525 + fepD MCAODC_26805 0.57 -0.9 2,077,526 - fepD MCAODC_26805 0.58 -0.6 2,077,526 - fepD MCAODC_26805 0.58 -0.3 2,077,526 - fepD MCAODC_26805 0.58 +0.3 2,077,526 - fepD MCAODC_26805 0.58 +0.1 2,077,529 + fepD MCAODC_26805 0.58 -0.1 2,077,530 - fepD MCAODC_26805 0.58 -0.1 2,077,534 + fepD MCAODC_26805 0.58 -1.1 2,077,580 - fepD MCAODC_26805 0.63 -0.6 2,077,582 + fepD MCAODC_26805 0.63 -0.5 2,077,804 + fepD MCAODC_26805 0.85 -1.9 2,077,811 + fepD MCAODC_26805 0.86 +0.4 2,077,895 + -1.2 2,077,955 + +0.4 2,077,972 - +2.2 2,078,017 + -1.6 2,078,064 + fepG MCAODC_26810 0.12 +0.2 2,078,098 + fepG MCAODC_26810 0.15 -1.6 2,078,227 - fepG MCAODC_26810 0.28 -0.7 2,078,237 - fepG MCAODC_26810 0.29 -0.2 2,078,392 + fepG MCAODC_26810 0.45 -0.1 2,078,393 - fepG MCAODC_26810 0.45 -0.7 2,078,548 + fepG MCAODC_26810 0.60 -1.0 2,078,548 + fepG MCAODC_26810 0.60 -1.5 2,078,548 + fepG MCAODC_26810 0.60 -0.0 2,078,548 + fepG MCAODC_26810 0.60 -2.6 2,078,548 + fepG MCAODC_26810 0.60 +0.1 2,078,549 - fepG MCAODC_26810 0.60 -0.4 2,078,550 + fepG MCAODC_26810 0.61 -1.5 2,078,550 + fepG MCAODC_26810 0.61 +0.3 2,078,550 + fepG MCAODC_26810 0.61 -1.4 2,078,559 + fepG MCAODC_26810 0.61 -0.3 2,078,758 + fepG MCAODC_26810 0.81 -0.4 2,078,849 - +0.5 2,078,900 + +2.2 2,078,900 + +0.9 2,078,901 - +0.2 2,078,906 - +0.4
Or see this region's nucleotide sequence