Strain Fitness in Escherichia coli ECRC101 around MCAODC_12315

Experiment: Control_ECRC101_WM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC101_WM
2,438,563	-				+1.0
2,438,575	+	yfgH	MCAODC_12305	0.12	+0.7
2,438,575	+	yfgH	MCAODC_12305	0.12	-1.4
2,438,597	-	yfgH	MCAODC_12305	0.16	+0.7
2,438,624	-	yfgH	MCAODC_12305	0.22	-0.2
2,438,629	+	yfgH	MCAODC_12305	0.22	-0.6
2,438,629	+	yfgH	MCAODC_12305	0.22	+0.1
2,438,630	-	yfgH	MCAODC_12305	0.23	-1.6
2,438,630	-	yfgH	MCAODC_12305	0.23	-1.8
2,438,630	-	yfgH	MCAODC_12305	0.23	+0.5
2,438,630	-	yfgH	MCAODC_12305	0.23	+1.4
2,438,630	-	yfgH	MCAODC_12305	0.23	+0.5
2,438,631	+	yfgH	MCAODC_12305	0.23	+0.7
2,438,631	+	yfgH	MCAODC_12305	0.23	+2.7
2,438,631	+	yfgH	MCAODC_12305	0.23	-0.3
2,438,632	-	yfgH	MCAODC_12305	0.23	-2.1
2,438,632	-	yfgH	MCAODC_12305	0.23	-0.1
2,438,632	-	yfgH	MCAODC_12305	0.23	-0.1
2,438,650	+	yfgH	MCAODC_12305	0.27	+1.6
2,438,650	+	yfgH	MCAODC_12305	0.27	+2.7
2,438,652	+	yfgH	MCAODC_12305	0.27	+3.5
2,438,652	+	yfgH	MCAODC_12305	0.27	+0.0
2,438,653	-	yfgH	MCAODC_12305	0.27	+0.4
2,438,653	-	yfgH	MCAODC_12305	0.27	-0.3
2,438,653	-	yfgH	MCAODC_12305	0.27	+0.3
2,438,653	-	yfgH	MCAODC_12305	0.27	-0.6
2,438,653	-	yfgH	MCAODC_12305	0.27	+0.1
2,438,676	-	yfgH	MCAODC_12305	0.32	+0.9
2,438,676	-	yfgH	MCAODC_12305	0.32	-0.9
2,438,695	+	yfgH	MCAODC_12305	0.35	-0.1
2,438,696	-	yfgH	MCAODC_12305	0.35	-1.5
2,438,931	+	yfgH	MCAODC_12305	0.81	+0.2
2,439,045	-				-0.1
2,439,430	+	yfgG	MCAODC_12310	0.51	-1.3
2,439,431	-	yfgG	MCAODC_12310	0.51	+1.0
2,439,435	-	yfgG	MCAODC_12310	0.53	+0.7
2,439,472	-	yfgG	MCAODC_12310	0.75	-0.4
2,439,515	+				+0.4
2,439,551	-				+1.5
2,439,575	+		MCAODC_12315	0.16	-0.7
2,439,576	-		MCAODC_12315	0.16	-1.0
2,439,687	+		MCAODC_12315	0.89	-0.2
2,439,688	-				+2.1
2,439,702	-				+0.1
2,439,718	+				-0.2
2,439,748	+				+0.9
2,439,750	+				-0.9
2,439,751	-				+0.3
2,439,796	-				+0.1
2,439,797	+				-0.7
2,439,798	-				+0.1
2,439,845	+				+0.2
2,439,903	+				+0.1
2,439,956	-				+1.3
2,440,113	+	pdeF	MCAODC_12320	0.10	+0.1
2,440,160	+	pdeF	MCAODC_12320	0.12	+1.6
2,440,169	+	pdeF	MCAODC_12320	0.13	-0.9
2,440,169	+	pdeF	MCAODC_12320	0.13	-0.8
2,440,203	-	pdeF	MCAODC_12320	0.14	+0.3
2,440,203	-	pdeF	MCAODC_12320	0.14	-0.4
2,440,256	+	pdeF	MCAODC_12320	0.17	+1.7
2,440,256	+	pdeF	MCAODC_12320	0.17	+0.1
2,440,256	+	pdeF	MCAODC_12320	0.17	-0.2
2,440,257	-	pdeF	MCAODC_12320	0.17	-1.1
2,440,322	-	pdeF	MCAODC_12320	0.19	-0.5
2,440,381	+	pdeF	MCAODC_12320	0.22	+1.1
2,440,382	-	pdeF	MCAODC_12320	0.22	+0.4
2,440,434	+	pdeF	MCAODC_12320	0.24	-1.3
2,440,435	-	pdeF	MCAODC_12320	0.25	-1.1
2,440,475	+	pdeF	MCAODC_12320	0.26	+0.4
2,440,492	+	pdeF	MCAODC_12320	0.27	-0.9
2,440,552	+	pdeF	MCAODC_12320	0.30	+1.7
2,440,562	-	pdeF	MCAODC_12320	0.30	+1.4
2,440,562	-	pdeF	MCAODC_12320	0.30	+1.5
2,440,573	+	pdeF	MCAODC_12320	0.31	-1.0
2,440,617	+	pdeF	MCAODC_12320	0.33	-2.0
2,440,618	-	pdeF	MCAODC_12320	0.33	+0.6
2,440,620	-	pdeF	MCAODC_12320	0.33	+0.7
2,440,671	+	pdeF	MCAODC_12320	0.35	+0.0
2,440,671	+	pdeF	MCAODC_12320	0.35	+0.2
2,440,672	-	pdeF	MCAODC_12320	0.35	-0.3
2,440,672	-	pdeF	MCAODC_12320	0.35	-1.3
2,440,673	+	pdeF	MCAODC_12320	0.35	-0.6
2,440,673	+	pdeF	MCAODC_12320	0.35	+0.5
2,440,673	+	pdeF	MCAODC_12320	0.35	+1.1
2,440,674	-	pdeF	MCAODC_12320	0.35	+1.3
2,440,674	-	pdeF	MCAODC_12320	0.35	+0.1
2,440,674	-	pdeF	MCAODC_12320	0.35	+1.2
2,440,674	-	pdeF	MCAODC_12320	0.35	-0.7
2,440,674	-	pdeF	MCAODC_12320	0.35	-2.1