Strain Fitness in Escherichia coli ECRC101 around MCAODC_06385

Experiment: Control_ECRC101_WM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC101_WM
1,289,490	+	aldB	MCAODC_06380	0.76	-1.5
1,289,491	-	aldB	MCAODC_06380	0.76	-0.3
1,289,491	-	aldB	MCAODC_06380	0.76	-0.0
1,289,491	-	aldB	MCAODC_06380	0.76	-0.2
1,289,493	+	aldB	MCAODC_06380	0.76	+1.2
1,289,494	-	aldB	MCAODC_06380	0.76	-0.2
1,289,494	-	aldB	MCAODC_06380	0.76	+0.4
1,289,528	+	aldB	MCAODC_06380	0.78	-0.4
1,289,576	+	aldB	MCAODC_06380	0.81	+0.4
1,289,625	+	aldB	MCAODC_06380	0.84	-2.6
1,289,670	+	aldB	MCAODC_06380	0.87	-0.5
1,289,670	+	aldB	MCAODC_06380	0.87	+0.4
1,289,671	-	aldB	MCAODC_06380	0.87	+0.2
1,289,672	+	aldB	MCAODC_06380	0.87	+1.0
1,289,672	+	aldB	MCAODC_06380	0.87	+0.4
1,289,673	-	aldB	MCAODC_06380	0.88	+1.3
1,289,719	-				+0.9
1,289,754	+				-1.6
1,289,806	-				+0.8
1,289,828	-				-0.2
1,289,828	-				+1.3
1,289,844	-				+0.7
1,289,867	+				-0.2
1,289,867	+				+0.4
1,289,867	+				-0.1
1,289,867	+				-0.3
1,289,867	+				-0.6
1,289,867	+				-2.2
1,289,891	+				-0.6
1,289,891	+				+0.1
1,289,891	+				-1.7
1,289,891	+				-0.1
1,289,891	+				+0.7
1,289,891	+				+0.1
1,289,892	-				-0.4
1,289,892	-				-0.1
1,289,892	-				+0.6
1,289,892	-				-0.2
1,289,892	-				+0.8
1,289,892	-				-0.6
1,289,911	+				+0.8
1,289,920	+				-0.8
1,289,921	-				-1.6
1,289,961	+				+1.5
1,289,961	+				+0.9
1,289,999	-				+0.6
1,290,012	+				-0.5
1,290,012	+				-2.8
1,290,018	+				+1.2
1,290,018	+				+1.4
1,290,019	-				+1.2
1,290,019	-				-0.3
1,290,019	-				-0.0
1,290,019	-				-0.3
1,290,039	+				-0.1
1,290,040	-				-0.1
1,290,158	+				-0.5
1,290,165	+				+0.0
1,290,184	+				+0.0
1,290,185	-				+0.0
1,290,212	-				+0.4
1,290,239	+				-0.7
1,290,310	-				+0.0
1,290,408	+				+2.7
1,290,409	-				-0.6
1,290,579	+	yiaW	MCAODC_06385	0.52	-0.2
1,290,579	+	yiaW	MCAODC_06385	0.52	-1.8
1,290,579	+	yiaW	MCAODC_06385	0.52	-1.3
1,290,733	+				+0.3
1,290,737	+				+0.5
1,290,737	+				-1.2
1,290,738	-				-0.8
1,290,763	-				+0.8
1,290,813	-				+0.5
1,290,813	-				-1.6
1,290,882	+	yiaV	MCAODC_06390	0.13	-0.0
1,290,961	+	yiaV	MCAODC_06390	0.20	+0.4
1,291,082	+	yiaV	MCAODC_06390	0.30	-0.4
1,291,108	+	yiaV	MCAODC_06390	0.33	-0.0
1,291,109	-	yiaV	MCAODC_06390	0.33	+0.6
1,291,109	-	yiaV	MCAODC_06390	0.33	-1.1
1,291,155	-	yiaV	MCAODC_06390	0.37	-0.8
1,291,170	+	yiaV	MCAODC_06390	0.38	+0.8
1,291,170	+	yiaV	MCAODC_06390	0.38	-0.2
1,291,171	-	yiaV	MCAODC_06390	0.38	+2.6
1,291,227	-	yiaV	MCAODC_06390	0.43	-0.3
1,291,381	-	yiaV	MCAODC_06390	0.57	-0.0
1,291,381	-	yiaV	MCAODC_06390	0.57	-0.6
1,291,383	-	yiaV	MCAODC_06390	0.57	-1.6
1,291,400	-	yiaV	MCAODC_06390	0.58	+1.9
1,291,422	+	yiaV	MCAODC_06390	0.60	+1.9
1,291,422	+	yiaV	MCAODC_06390	0.60	-1.6
1,291,422	+	yiaV	MCAODC_06390	0.60	-0.5
1,291,423	-	yiaV	MCAODC_06390	0.60	-1.1
1,291,423	-	yiaV	MCAODC_06390	0.60	+0.7
1,291,423	-	yiaV	MCAODC_06390	0.60	+1.2
1,291,423	-	yiaV	MCAODC_06390	0.60	-0.1
1,291,423	-	yiaV	MCAODC_06390	0.60	+0.3
1,291,423	-	yiaV	MCAODC_06390	0.60	+0.5
1,291,455	+	yiaV	MCAODC_06390	0.63	+0.7
1,291,455	+	yiaV	MCAODC_06390	0.63	-1.5
1,291,455	+	yiaV	MCAODC_06390	0.63	+1.2
1,291,456	-	yiaV	MCAODC_06390	0.63	+0.8
1,291,456	-	yiaV	MCAODC_06390	0.63	+1.4
1,291,474	+	yiaV	MCAODC_06390	0.65	-0.1
1,291,493	+	yiaV	MCAODC_06390	0.66	+0.3
1,291,494	-	yiaV	MCAODC_06390	0.66	+0.3
1,291,579	+	yiaV	MCAODC_06390	0.74	+0.2
1,291,580	-	yiaV	MCAODC_06390	0.74	-0.1
1,291,580	-	yiaV	MCAODC_06390	0.74	+0.6
1,291,583	+	yiaV	MCAODC_06390	0.74	-0.3
1,291,583	+	yiaV	MCAODC_06390	0.74	+0.1
1,291,583	+	yiaV	MCAODC_06390	0.74	+1.2
1,291,584	-	yiaV	MCAODC_06390	0.74	-0.1
1,291,584	-	yiaV	MCAODC_06390	0.74	+0.3
1,291,584	-	yiaV	MCAODC_06390	0.74	+0.1
1,291,653	+	yiaV	MCAODC_06390	0.80	-0.3
1,291,672	+	yiaV	MCAODC_06390	0.82	-0.2
1,291,673	-	yiaV	MCAODC_06390	0.82	-0.7