Strain Fitness in Escherichia coli ECRC101 around MCAODC_05140

Experiment: Control_ECRC101_WM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC101_WM
1,034,875	+				-2.6
1,035,137	+	ilvY	MCAODC_05135	0.25	-1.2
1,035,192	+	ilvY	MCAODC_05135	0.31	-2.1
1,035,192	+	ilvY	MCAODC_05135	0.31	-1.3
1,035,192	+	ilvY	MCAODC_05135	0.31	-1.5
1,035,192	+	ilvY	MCAODC_05135	0.31	-1.8
1,035,192	+	ilvY	MCAODC_05135	0.31	-3.7
1,035,192	+	ilvY	MCAODC_05135	0.31	-0.5
1,035,193	-	ilvY	MCAODC_05135	0.31	-1.7
1,035,193	-	ilvY	MCAODC_05135	0.31	-0.6
1,035,193	-	ilvY	MCAODC_05135	0.31	+0.6
1,035,193	-	ilvY	MCAODC_05135	0.31	-2.9
1,035,196	+	ilvY	MCAODC_05135	0.31	-1.3
1,035,196	+	ilvY	MCAODC_05135	0.31	-0.7
1,035,196	+	ilvY	MCAODC_05135	0.31	-0.9
1,035,196	+	ilvY	MCAODC_05135	0.31	-2.4
1,035,196	+	ilvY	MCAODC_05135	0.31	+0.4
1,035,196	+	ilvY	MCAODC_05135	0.31	-1.2
1,035,197	-	ilvY	MCAODC_05135	0.32	-2.6
1,035,222	-	ilvY	MCAODC_05135	0.34	-0.2
1,035,280	+	ilvY	MCAODC_05135	0.41	-2.0
1,035,281	-	ilvY	MCAODC_05135	0.41	+0.5
1,035,290	-	ilvY	MCAODC_05135	0.42	-2.0
1,035,381	+	ilvY	MCAODC_05135	0.52	-0.2
1,035,448	+	ilvY	MCAODC_05135	0.60	-3.1
1,035,463	-	ilvY	MCAODC_05135	0.61	+0.2
1,035,494	-	ilvY	MCAODC_05135	0.65	-1.1
1,035,494	-	ilvY	MCAODC_05135	0.65	+0.0
1,035,517	-	ilvY	MCAODC_05135	0.67	-0.3
1,035,551	-	ilvY	MCAODC_05135	0.71	-1.6
1,035,572	+	ilvY	MCAODC_05135	0.73	-2.1
1,035,573	-	ilvY	MCAODC_05135	0.74	-0.4
1,035,824	-				-0.5
1,035,824	-				-1.2
1,035,833	-				+0.3
1,036,098	+	ilvA	MCAODC_05140	0.15	-0.1
1,036,098	+	ilvA	MCAODC_05140	0.15	-1.6
1,036,098	+	ilvA	MCAODC_05140	0.15	+0.2
1,036,099	-	ilvA	MCAODC_05140	0.15	-2.5
1,036,141	+	ilvA	MCAODC_05140	0.18	-3.1
1,036,142	-	ilvA	MCAODC_05140	0.18	-2.0
1,036,142	-	ilvA	MCAODC_05140	0.18	-0.3
1,036,143	+	ilvA	MCAODC_05140	0.18	+1.4
1,036,144	-	ilvA	MCAODC_05140	0.18	-0.4
1,036,144	-	ilvA	MCAODC_05140	0.18	-1.6
1,036,144	-	ilvA	MCAODC_05140	0.18	-1.4
1,036,144	-	ilvA	MCAODC_05140	0.18	-2.9
1,036,144	-	ilvA	MCAODC_05140	0.18	+0.0
1,036,299	+	ilvA	MCAODC_05140	0.28	-3.6
1,036,300	-	ilvA	MCAODC_05140	0.28	-2.2
1,036,428	+	ilvA	MCAODC_05140	0.37	-4.1
1,036,429	-	ilvA	MCAODC_05140	0.37	-3.3
1,036,469	-	ilvA	MCAODC_05140	0.39	-0.5
1,036,507	+	ilvA	MCAODC_05140	0.42	-2.1
1,036,510	-	ilvA	MCAODC_05140	0.42	-1.7
1,036,510	-	ilvA	MCAODC_05140	0.42	-2.0
1,036,510	-	ilvA	MCAODC_05140	0.42	-2.1
1,036,574	+	ilvA	MCAODC_05140	0.46	-2.8
1,036,621	+	ilvA	MCAODC_05140	0.49	-2.9
1,036,621	+	ilvA	MCAODC_05140	0.49	-0.8
1,036,622	-	ilvA	MCAODC_05140	0.49	-0.6
1,036,632	+	ilvA	MCAODC_05140	0.50	-0.6
1,036,633	-	ilvA	MCAODC_05140	0.50	-1.0
1,036,633	-	ilvA	MCAODC_05140	0.50	-1.2
1,036,633	-	ilvA	MCAODC_05140	0.50	-1.6
1,036,778	+	ilvA	MCAODC_05140	0.59	-1.6
1,036,778	+	ilvA	MCAODC_05140	0.59	-0.6
1,036,779	-	ilvA	MCAODC_05140	0.59	-3.1
1,037,080	+	ilvA	MCAODC_05140	0.79	-1.4
1,037,080	+	ilvA	MCAODC_05140	0.79	-3.4
1,037,081	-	ilvA	MCAODC_05140	0.79	-1.0
1,037,206	-	ilvA	MCAODC_05140	0.87	-1.7
1,037,221	+	ilvA	MCAODC_05140	0.88	-2.0
1,037,221	+	ilvA	MCAODC_05140	0.88	-1.5
1,037,221	+	ilvA	MCAODC_05140	0.88	-2.0
1,037,222	-	ilvA	MCAODC_05140	0.88	-0.5
1,037,269	+				-2.1
1,037,269	+				-1.5
1,037,270	-				-0.3
1,037,354	+				-1.7
1,037,354	+				-0.7
1,037,355	-				-1.9
1,037,358	+				-1.1
1,037,359	-				-3.9
1,037,406	-				-1.1
1,037,406	-				-1.5
1,037,408	+				-2.8
1,037,471	+				-1.9
1,037,472	-				-3.7
1,037,472	-				-2.9
1,037,472	-				-3.7
1,037,472	-				-1.1
1,037,578	+				-2.3
1,037,578	+				-1.9
1,037,578	+				-2.6
1,037,578	+				-3.0
1,037,579	-				-1.1
1,037,584	+				-2.2
1,037,778	-	ilvD	MCAODC_05145	0.20	-1.0
1,037,778	-	ilvD	MCAODC_05145	0.20	-2.4
1,037,819	+	ilvD	MCAODC_05145	0.22	-1.7
1,037,827	+	ilvD	MCAODC_05145	0.23	-2.0
1,037,828	-	ilvD	MCAODC_05145	0.23	-4.2
1,037,830	+	ilvD	MCAODC_05145	0.23	-2.4
1,037,830	+	ilvD	MCAODC_05145	0.23	-3.4
1,037,830	+	ilvD	MCAODC_05145	0.23	-2.8
1,037,831	-	ilvD	MCAODC_05145	0.23	-2.2
1,037,831	-	ilvD	MCAODC_05145	0.23	-1.1
1,037,831	-	ilvD	MCAODC_05145	0.23	-2.5
1,037,831	-	ilvD	MCAODC_05145	0.23	-3.3
1,037,894	+	ilvD	MCAODC_05145	0.26	-0.1
1,037,950	-	ilvD	MCAODC_05145	0.29	-4.1
1,037,981	+	ilvD	MCAODC_05145	0.31	-0.7
1,037,981	+	ilvD	MCAODC_05145	0.31	-1.6
1,037,981	+	ilvD	MCAODC_05145	0.31	-1.3
1,038,009	+	ilvD	MCAODC_05145	0.33	+0.2
1,038,009	+	ilvD	MCAODC_05145	0.33	-1.4
1,038,011	+	ilvD	MCAODC_05145	0.33	-4.7
1,038,011	+	ilvD	MCAODC_05145	0.33	-2.5
1,038,011	+	ilvD	MCAODC_05145	0.33	-2.7
1,038,012	-	ilvD	MCAODC_05145	0.33	-2.7
1,038,012	-	ilvD	MCAODC_05145	0.33	-2.3
1,038,012	-	ilvD	MCAODC_05145	0.33	-2.2
1,038,063	+	ilvD	MCAODC_05145	0.35	-1.0
1,038,130	-	ilvD	MCAODC_05145	0.39	-1.6
1,038,159	+	ilvD	MCAODC_05145	0.41	-3.1
1,038,160	-	ilvD	MCAODC_05145	0.41	-3.1
1,038,160	-	ilvD	MCAODC_05145	0.41	-2.4
1,038,167	+	ilvD	MCAODC_05145	0.41	-3.2
1,038,168	-	ilvD	MCAODC_05145	0.41	-2.1
1,038,168	-	ilvD	MCAODC_05145	0.41	-2.2
1,038,168	-	ilvD	MCAODC_05145	0.41	-2.1
1,038,168	-	ilvD	MCAODC_05145	0.41	-2.0
1,038,202	+	ilvD	MCAODC_05145	0.43	-1.3
1,038,255	+	ilvD	MCAODC_05145	0.46	-1.4
1,038,291	+	ilvD	MCAODC_05145	0.48	-2.3
1,038,292	-	ilvD	MCAODC_05145	0.48	+0.4
1,038,292	-	ilvD	MCAODC_05145	0.48	-1.6
1,038,296	+	ilvD	MCAODC_05145	0.48	-1.0
1,038,296	+	ilvD	MCAODC_05145	0.48	-2.3
1,038,297	-	ilvD	MCAODC_05145	0.48	-1.9
1,038,325	+	ilvD	MCAODC_05145	0.50	-2.0
1,038,325	+	ilvD	MCAODC_05145	0.50	-5.0
1,038,325	+	ilvD	MCAODC_05145	0.50	-2.2
1,038,326	-	ilvD	MCAODC_05145	0.50	-1.5
1,038,351	+	ilvD	MCAODC_05145	0.51	-2.8