Strain Fitness in Bosea sp. OAE506 around ABIE41_RS24105

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
4,976,712	+		ABIE41_RS24100	0.39	+1.1
4,976,712	+		ABIE41_RS24100	0.39	+0.2
4,976,713	-		ABIE41_RS24100	0.39	+0.1
4,976,713	-		ABIE41_RS24100	0.39	+0.5
4,976,713	-		ABIE41_RS24100	0.39	+0.2
4,976,748	+		ABIE41_RS24100	0.42	-1.2
4,976,748	+		ABIE41_RS24100	0.42	-0.3
4,976,815	-		ABIE41_RS24100	0.49	+0.6
4,976,827	+		ABIE41_RS24100	0.50	+1.1
4,976,827	+		ABIE41_RS24100	0.50	-1.3
4,976,828	-		ABIE41_RS24100	0.50	+1.2
4,976,828	-		ABIE41_RS24100	0.50	+0.4
4,976,828	-		ABIE41_RS24100	0.50	+1.0
4,976,991	+		ABIE41_RS24100	0.65	-0.4
4,976,991	+		ABIE41_RS24100	0.65	+1.0
4,977,053	+		ABIE41_RS24100	0.71	+0.1
4,977,053	+		ABIE41_RS24100	0.71	+0.4
4,977,054	-		ABIE41_RS24100	0.71	+0.7
4,977,054	-		ABIE41_RS24100	0.71	+0.3
4,977,155	+		ABIE41_RS24100	0.80	-0.8
4,977,156	-		ABIE41_RS24100	0.80	+1.6
4,977,156	-		ABIE41_RS24100	0.80	+0.7
4,977,156	-		ABIE41_RS24100	0.80	+1.5
4,977,273	+				+0.5
4,977,273	+				-0.4
4,977,273	+				+0.0
4,977,274	-				-0.8
4,977,274	-				-0.1
4,977,370	+				-1.3
4,977,370	+				+0.1
4,977,370	+				+0.1
4,977,370	+				+0.1
4,977,370	+				+0.4
4,977,370	+				+1.3
4,977,371	-				-1.0
4,977,371	-				-0.2
4,977,371	-				+0.6
4,977,371	-				-0.4
4,977,371	-				-0.8
4,977,371	-				+0.4
4,977,371	-				-0.3
4,977,381	+				+1.2
4,977,381	+				+0.5
4,977,382	-				+0.1
4,977,538	+		ABIE41_RS24105	0.14	-0.5
4,977,538	+		ABIE41_RS24105	0.14	-0.5
4,977,539	-		ABIE41_RS24105	0.14	+0.2
4,977,565	+		ABIE41_RS24105	0.17	-0.5
4,977,565	+		ABIE41_RS24105	0.17	+0.3
4,977,566	-		ABIE41_RS24105	0.17	+1.7
4,977,742	+		ABIE41_RS24105	0.34	+0.6
4,977,784	+		ABIE41_RS24105	0.38	-1.4
4,977,784	+		ABIE41_RS24105	0.38	+0.1
4,977,784	+		ABIE41_RS24105	0.38	-0.3
4,977,784	+		ABIE41_RS24105	0.38	+1.9
4,977,784	+		ABIE41_RS24105	0.38	+0.0
4,977,784	+		ABIE41_RS24105	0.38	+0.1
4,977,784	+		ABIE41_RS24105	0.38	-0.8
4,977,784	+		ABIE41_RS24105	0.38	+0.3
4,977,785	-		ABIE41_RS24105	0.38	+0.2
4,977,785	-		ABIE41_RS24105	0.38	+0.2
4,977,785	-		ABIE41_RS24105	0.38	+0.0
4,977,785	-		ABIE41_RS24105	0.38	-0.5
4,977,785	-		ABIE41_RS24105	0.38	+0.1
4,978,001	-		ABIE41_RS24105	0.60	-0.6
4,978,001	-		ABIE41_RS24105	0.60	-0.3
4,978,094	-		ABIE41_RS24105	0.69	+0.7
4,978,094	-		ABIE41_RS24105	0.69	-0.8
4,978,094	-		ABIE41_RS24105	0.69	+0.1
4,978,408	+				-1.6
4,978,409	-				+1.1
4,978,409	-				-0.8
4,978,522	+		ABIE41_RS24110	0.20	+1.4
4,978,522	+		ABIE41_RS24110	0.20	-0.2
4,978,695	+		ABIE41_RS24110	0.64	-0.5
4,978,696	-		ABIE41_RS24110	0.64	-0.2
4,978,696	-		ABIE41_RS24110	0.64	-0.3
4,978,696	-		ABIE41_RS24110	0.64	+0.3
4,978,696	-		ABIE41_RS24110	0.64	+0.5
4,978,777	+		ABIE41_RS24110	0.84	-0.5
4,978,777	+		ABIE41_RS24110	0.84	-0.1
4,978,778	-		ABIE41_RS24110	0.84	-0.8
4,978,778	-		ABIE41_RS24110	0.84	+0.4
4,978,778	-		ABIE41_RS24110	0.84	-1.2
4,979,120	+		ABIE41_RS24115	0.26	+0.3
4,979,120	+		ABIE41_RS24115	0.26	+0.9
4,979,120	+		ABIE41_RS24115	0.26	+0.4
4,979,121	-		ABIE41_RS24115	0.26	-0.7
4,979,121	-		ABIE41_RS24115	0.26	-1.6