Strain Fitness in Bosea sp. OAE506 around ABIE41_RS22400

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
4,611,110	+				-2.7
4,611,110	+				-1.6
4,611,111	-				-2.0
4,611,579	+		ABIE41_RS22395	0.59	+0.3
4,611,579	+		ABIE41_RS22395	0.59	+0.3
4,611,579	+		ABIE41_RS22395	0.59	+1.1
4,611,580	-		ABIE41_RS22395	0.59	+0.7
4,611,790	-				+0.2
4,611,790	-				-1.0
4,611,835	+				+0.1
4,611,836	-				-0.9
4,611,836	-				-0.6
4,611,952	+				+1.2
4,611,952	+				-0.2
4,611,952	+				-1.1
4,611,952	+				-0.1
4,611,953	-				-0.5
4,611,953	-				-0.0
4,611,953	-				+0.4
4,611,953	-				-0.3
4,611,953	-				+1.1
4,611,953	-				-0.2
4,611,953	-				-1.5
4,611,953	-				+0.4
4,611,956	+				-0.1
4,611,956	+				+0.4
4,611,956	+				+0.6
4,611,956	+				-0.3
4,611,956	+				-0.2
4,611,956	+				-0.5
4,611,956	+				+0.8
4,611,956	+				+0.3
4,611,957	-				+0.4
4,611,957	-				-0.2
4,611,957	-				-0.2
4,611,957	-				+0.2
4,611,957	-				-0.6
4,611,957	-				+0.6
4,611,957	-				+0.2
4,611,957	-				-0.8
4,611,957	-				-0.6
4,611,957	-				-0.5
4,611,957	-				-0.4
4,611,957	-				+0.2
4,611,977	-				+0.2
4,612,171	+				-0.1
4,612,171	+				+0.6
4,612,171	+				-0.1
4,612,172	-				+0.3
4,612,172	-				-0.0
4,612,172	-				-1.0
4,612,172	-				-0.5
4,612,172	-				-0.0
4,612,172	-				+0.3
4,612,172	-				+0.3
4,612,172	-				+0.1
4,612,172	-				+0.9
4,612,172	-				-0.6
4,612,172	-				+0.5
4,612,480	+		ABIE41_RS22400	0.19	-1.0
4,612,481	-		ABIE41_RS22400	0.19	-0.0
4,612,696	+		ABIE41_RS22400	0.29	-1.0
4,612,697	-		ABIE41_RS22400	0.29	-0.3
4,612,697	-		ABIE41_RS22400	0.29	+1.3
4,612,711	+		ABIE41_RS22400	0.29	+0.0
4,612,711	+		ABIE41_RS22400	0.29	-0.0
4,612,711	+		ABIE41_RS22400	0.29	+0.5
4,612,712	-		ABIE41_RS22400	0.29	+2.1
4,612,712	-		ABIE41_RS22400	0.29	-0.3
4,612,712	-		ABIE41_RS22400	0.29	+1.3
4,612,712	-		ABIE41_RS22400	0.29	+0.6
4,612,712	-		ABIE41_RS22400	0.29	+0.3
4,612,712	-		ABIE41_RS22400	0.29	-0.0
4,612,712	-		ABIE41_RS22400	0.29	+0.5
4,612,713	+		ABIE41_RS22400	0.29	+0.2
4,612,754	-		ABIE41_RS22400	0.31	-0.4
4,612,754	-		ABIE41_RS22400	0.31	-1.2
4,612,756	+		ABIE41_RS22400	0.31	+1.8
4,612,757	-		ABIE41_RS22400	0.31	+0.3
4,612,757	-		ABIE41_RS22400	0.31	+0.2
4,612,757	-		ABIE41_RS22400	0.31	-0.3
4,612,834	+		ABIE41_RS22400	0.35	-0.6
4,612,834	+		ABIE41_RS22400	0.35	+0.2
4,612,835	-		ABIE41_RS22400	0.35	+0.8
4,612,990	+		ABIE41_RS22400	0.42	-0.1
4,612,990	+		ABIE41_RS22400	0.42	-0.2
4,613,297	-		ABIE41_RS22400	0.56	-0.6
4,613,323	+		ABIE41_RS22400	0.57	+0.7
4,613,324	-		ABIE41_RS22400	0.57	-0.7
4,613,719	+		ABIE41_RS22400	0.75	+0.5
4,613,719	+		ABIE41_RS22400	0.75	-0.2
4,613,719	+		ABIE41_RS22400	0.75	+0.2
4,613,881	+		ABIE41_RS22400	0.82	+0.1
4,613,881	+		ABIE41_RS22400	0.82	+0.1
4,613,896	+		ABIE41_RS22400	0.82	-1.4
4,613,896	+		ABIE41_RS22400	0.82	-0.2
4,613,897	-		ABIE41_RS22400	0.83	-2.0
4,613,897	-		ABIE41_RS22400	0.83	-0.1
4,613,905	+		ABIE41_RS22400	0.83	-1.1
4,613,905	+		ABIE41_RS22400	0.83	+0.6
4,614,144	+				+0.4
4,614,145	-				-0.3
4,614,145	-				-2.3
4,614,284	-				+1.0
4,614,400	+				+0.1
4,614,401	-				-0.4
4,614,401	-				-0.3
4,614,401	-				+0.3
4,614,401	-				-0.0
4,614,535	+		ABIE41_RS22405	0.27	+1.3
4,614,535	+		ABIE41_RS22405	0.27	+0.2
4,614,535	+		ABIE41_RS22405	0.27	-0.6
4,614,535	+		ABIE41_RS22405	0.27	-0.8
4,614,535	+		ABIE41_RS22405	0.27	+0.3
4,614,535	+		ABIE41_RS22405	0.27	+0.8
4,614,535	+		ABIE41_RS22405	0.27	-0.5
4,614,535	+		ABIE41_RS22405	0.27	-1.5
4,614,536	-		ABIE41_RS22405	0.27	+1.4
4,614,537	+		ABIE41_RS22405	0.27	-0.2
4,614,537	+		ABIE41_RS22405	0.27	+0.3
4,614,537	+		ABIE41_RS22405	0.27	+0.1
4,614,537	+		ABIE41_RS22405	0.27	-0.0
4,614,537	+		ABIE41_RS22405	0.27	+1.2
4,614,537	+		ABIE41_RS22405	0.27	-0.7
4,614,537	+		ABIE41_RS22405	0.27	-1.0
4,614,538	-		ABIE41_RS22405	0.28	-0.3
4,614,538	-		ABIE41_RS22405	0.28	+0.7
4,614,538	-		ABIE41_RS22405	0.28	-0.5
4,614,547	+		ABIE41_RS22405	0.29	+0.3
4,614,874	+		ABIE41_RS22405	0.86	+0.2
4,614,874	+		ABIE41_RS22405	0.86	+0.0
4,614,874	+		ABIE41_RS22405	0.86	+0.5
4,614,875	-		ABIE41_RS22405	0.86	+0.4
4,614,880	-		ABIE41_RS22405	0.87	+0.2
4,615,094	+		ABIE41_RS22410	0.22	-2.5
4,615,095	-		ABIE41_RS22410	0.23	+0.5
4,615,149	+		ABIE41_RS22410	0.31	-1.0
4,615,149	+		ABIE41_RS22410	0.31	+1.0
4,615,150	-		ABIE41_RS22410	0.31	+1.6
4,615,150	-		ABIE41_RS22410	0.31	+0.6
4,615,150	-		ABIE41_RS22410	0.31	-0.4
4,615,150	-		ABIE41_RS22410	0.31	+0.1
4,615,260	+		ABIE41_RS22410	0.48	-0.1
4,615,260	+		ABIE41_RS22410	0.48	+0.6
4,615,261	-		ABIE41_RS22410	0.49	-1.0
4,615,261	-		ABIE41_RS22410	0.49	+0.8
4,615,261	-		ABIE41_RS22410	0.49	+0.7
4,615,261	-		ABIE41_RS22410	0.49	+0.6