Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18215

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,749,304	+				-1.4
3,749,304	+				-0.1
3,749,305	-				+0.8
3,749,305	-				-0.5
3,749,382	-		ABIE41_RS18210	0.13	+0.1
3,749,467	+		ABIE41_RS18210	0.24	+0.6
3,749,468	-		ABIE41_RS18210	0.24	-0.6
3,749,468	-		ABIE41_RS18210	0.24	+0.9
3,749,511	+		ABIE41_RS18210	0.29	+0.7
3,749,774	-		ABIE41_RS18210	0.62	+0.5
3,749,860	+		ABIE41_RS18210	0.72	+0.0
3,749,860	+		ABIE41_RS18210	0.72	-1.4
3,749,860	+		ABIE41_RS18210	0.72	+0.0
3,749,861	-		ABIE41_RS18210	0.72	-1.1
3,749,861	-		ABIE41_RS18210	0.72	-0.3
3,750,156	-				+0.1
3,750,156	-				-0.8
3,750,208	+		ABIE41_RS18215	0.14	-1.7
3,750,209	-		ABIE41_RS18215	0.15	+0.2
3,750,215	+		ABIE41_RS18215	0.16	-0.4
3,750,215	+		ABIE41_RS18215	0.16	-1.1
3,750,216	-		ABIE41_RS18215	0.16	-1.1
3,750,216	-		ABIE41_RS18215	0.16	-0.5
3,750,904	-		ABIE41_RS18220	0.85	-0.8
3,751,078	+		ABIE41_RS18225	0.17	-0.1
3,751,078	+		ABIE41_RS18225	0.17	-0.0
3,751,079	-		ABIE41_RS18225	0.17	+0.5
3,751,196	+		ABIE41_RS18225	0.33	+1.2
3,751,196	+		ABIE41_RS18225	0.33	-0.9
3,751,196	+		ABIE41_RS18225	0.33	+0.0
3,751,196	+		ABIE41_RS18225	0.33	-1.1
3,751,196	+		ABIE41_RS18225	0.33	-0.5
3,751,197	-		ABIE41_RS18225	0.33	+0.3
3,751,197	-		ABIE41_RS18225	0.33	-1.3
3,751,199	+		ABIE41_RS18225	0.34	-0.4
3,751,332	-		ABIE41_RS18225	0.52	+0.1
3,751,332	-		ABIE41_RS18225	0.52	-0.5