Strain Fitness in Bosea sp. OAE506 around ABIE41_RS16440

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,381,707	+		ABIE41_RS16435	0.63	-0.9
3,381,707	+		ABIE41_RS16435	0.63	-0.1
3,381,707	+		ABIE41_RS16435	0.63	-0.9
3,381,707	+		ABIE41_RS16435	0.63	+0.5
3,381,707	+		ABIE41_RS16435	0.63	-0.3
3,381,707	+		ABIE41_RS16435	0.63	-0.0
3,381,707	+		ABIE41_RS16435	0.63	+0.6
3,381,707	+		ABIE41_RS16435	0.63	+0.2
3,381,707	+		ABIE41_RS16435	0.63	+0.9
3,381,707	+		ABIE41_RS16435	0.63	+0.2
3,381,707	+		ABIE41_RS16435	0.63	+0.1
3,381,707	+		ABIE41_RS16435	0.63	+0.2
3,381,707	+		ABIE41_RS16435	0.63	-0.2
3,381,707	+		ABIE41_RS16435	0.63	-0.2
3,381,708	-		ABIE41_RS16435	0.63	-1.3
3,381,708	-		ABIE41_RS16435	0.63	+0.0
3,381,708	-		ABIE41_RS16435	0.63	+0.4
3,381,708	-		ABIE41_RS16435	0.63	-0.0
3,381,708	-		ABIE41_RS16435	0.63	-0.5
3,381,708	-		ABIE41_RS16435	0.63	+0.7
3,381,708	-		ABIE41_RS16435	0.63	+0.2
3,381,725	+		ABIE41_RS16435	0.64	-0.5
3,382,184	+				-2.1
3,382,184	+				+0.2
3,382,184	+				+0.2
3,382,185	-				+1.1
3,382,185	-				-0.8
3,382,185	-				+0.0
3,382,206	-				+0.6
3,382,516	-				+0.0
3,382,516	-				-1.0
3,382,638	+		ABIE41_RS16440	0.16	-0.4
3,382,692	+		ABIE41_RS16440	0.20	-1.0
3,382,692	+		ABIE41_RS16440	0.20	+0.3
3,382,693	-		ABIE41_RS16440	0.20	-0.8
3,382,791	+		ABIE41_RS16440	0.26	+1.3
3,382,792	-		ABIE41_RS16440	0.26	-0.3
3,383,533	-		ABIE41_RS16440	0.76	-2.0
3,383,596	-		ABIE41_RS16440	0.81	-0.2
3,383,688	+		ABIE41_RS16440	0.87	+0.2
3,383,776	-				-0.1
3,383,776	-				+0.7
3,383,776	-				-0.2
3,384,354	+		ABIE41_RS16445	0.22	-0.5
3,384,354	+		ABIE41_RS16445	0.22	-0.0
3,384,355	-		ABIE41_RS16445	0.22	-1.1
3,384,582	+		ABIE41_RS16445	0.48	+0.2
3,384,741	+		ABIE41_RS16445	0.66	-0.2
3,384,741	+		ABIE41_RS16445	0.66	-1.4
3,384,741	+		ABIE41_RS16445	0.66	+0.3
3,384,742	-		ABIE41_RS16445	0.66	-0.1
3,384,742	-		ABIE41_RS16445	0.66	-0.1
3,384,831	+		ABIE41_RS16445	0.76	-0.2
3,384,831	+		ABIE41_RS16445	0.76	-0.2
3,384,831	+		ABIE41_RS16445	0.76	+0.8
3,384,832	-		ABIE41_RS16445	0.76	-1.7