Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06835

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
1,399,133	+				-0.3
1,399,133	+				+0.1
1,399,133	+				-2.4
1,399,133	+				+1.5
1,399,133	+				+0.0
1,399,133	+				+0.4
1,399,133	+				-0.4
1,399,133	+				-0.1
1,399,133	+				-0.6
1,399,133	+				-0.3
1,399,133	+				-0.0
1,399,133	+				+0.3
1,399,133	+				+0.4
1,399,133	+				+0.9
1,399,134	-				+0.4
1,399,134	-				+0.2
1,399,134	-				+0.4
1,399,134	-				+0.4
1,399,134	-				-0.0
1,399,134	-				+1.6
1,399,134	-				+2.8
1,399,134	-				+1.7
1,399,134	-				-0.8
1,399,181	-				+0.7
1,399,333	+				-0.6
1,399,333	+				+0.8
1,399,333	+				+0.3
1,399,334	-				+0.3
1,399,334	-				+0.1
1,399,334	-				+0.1
1,399,334	-				-0.3
1,399,334	-				+0.6
1,399,352	+				-0.4
1,399,352	+				+0.4
1,399,366	+				+0.8
1,399,367	-				+1.8
1,399,414	+				-0.9
1,399,414	+				-0.3
1,399,414	+				-0.4
1,399,414	+				-0.2
1,399,414	+				-1.0
1,399,414	+				-0.2
1,399,415	-				-0.6
1,399,415	-				+0.4
1,399,415	-				-2.1
1,399,415	-				-1.1
1,399,489	+		ABIE41_RS06830	0.20	-0.6
1,399,665	+		ABIE41_RS06830	0.58	-0.0
1,399,665	+		ABIE41_RS06830	0.58	-0.5
1,399,665	+		ABIE41_RS06830	0.58	-0.9
1,399,665	+		ABIE41_RS06830	0.58	-1.9
1,399,665	+		ABIE41_RS06830	0.58	-0.4
1,399,665	+		ABIE41_RS06830	0.58	+1.4
1,399,665	+		ABIE41_RS06830	0.58	+0.1
1,399,665	+		ABIE41_RS06830	0.58	+0.2
1,399,665	+		ABIE41_RS06830	0.58	+0.2
1,399,665	+		ABIE41_RS06830	0.58	+1.5
1,399,665	+		ABIE41_RS06830	0.58	-1.5
1,399,665	+		ABIE41_RS06830	0.58	+0.4
1,399,665	+		ABIE41_RS06830	0.58	+0.5
1,399,666	-		ABIE41_RS06830	0.58	+0.3
1,399,666	-		ABIE41_RS06830	0.58	-1.2
1,399,666	-		ABIE41_RS06830	0.58	+1.0
1,399,666	-		ABIE41_RS06830	0.58	-1.6
1,399,666	-		ABIE41_RS06830	0.58	+0.2
1,399,731	+		ABIE41_RS06830	0.71	-1.9
1,399,748	-		ABIE41_RS06830	0.75	-0.3
1,399,748	-		ABIE41_RS06830	0.75	-0.2
1,399,767	+		ABIE41_RS06830	0.79	-3.1
1,399,767	+		ABIE41_RS06830	0.79	-0.6
1,399,767	+		ABIE41_RS06830	0.79	-0.6
1,399,767	+		ABIE41_RS06830	0.79	-1.5
1,399,768	-		ABIE41_RS06830	0.79	-0.2
1,399,804	+		ABIE41_RS06830	0.87	-1.1
1,399,805	-		ABIE41_RS06830	0.87	-0.1
1,399,805	-		ABIE41_RS06830	0.87	+0.7
1,399,805	-		ABIE41_RS06830	0.87	+0.4
1,399,837	+				+0.4
1,399,838	-				+0.1
1,399,884	+				+0.8
1,399,884	+				+0.1
1,399,885	-				+0.2
1,399,885	-				-0.6
1,399,885	-				-0.2
1,399,904	-				-2.1
1,399,904	-				+0.3
1,399,991	+				-0.5
1,399,991	+				+0.5
1,399,991	+				+1.2
1,399,991	+				-0.3
1,399,992	-				-0.1
1,399,992	-				+1.1
1,399,992	-				-0.4
1,399,992	-				-0.8
1,400,001	-				-0.6
1,400,001	-				-0.9
1,400,005	+				-0.3
1,400,006	-				-0.8
1,400,006	-				+0.1
1,400,026	+				+1.0
1,400,026	+				+0.2
1,400,026	+				-0.4
1,400,027	-				-0.4
1,400,034	+				-1.3
1,400,034	+				+1.1
1,400,034	+				-0.4
1,400,035	-				+0.7
1,400,035	-				-0.1
1,400,035	-				-0.0
1,400,035	-				+0.0
1,400,035	-				-0.6
1,400,216	+		ABIE41_RS06835	0.17	-0.4
1,400,217	+		ABIE41_RS06835	0.17	+0.4
1,400,217	+		ABIE41_RS06835	0.17	-0.3
1,400,217	+		ABIE41_RS06835	0.17	+0.4
1,400,217	+		ABIE41_RS06835	0.17	+0.5
1,400,217	+		ABIE41_RS06835	0.17	-1.3
1,400,217	+		ABIE41_RS06835	0.17	+0.6
1,400,218	-		ABIE41_RS06835	0.17	-1.1
1,400,218	-		ABIE41_RS06835	0.17	-0.1
1,400,316	+		ABIE41_RS06835	0.27	+1.0
1,400,316	+		ABIE41_RS06835	0.27	-0.2
1,400,316	+		ABIE41_RS06835	0.27	+0.4
1,400,317	-		ABIE41_RS06835	0.27	-0.9
1,400,317	-		ABIE41_RS06835	0.27	-0.4
1,400,385	+		ABIE41_RS06835	0.33	-0.8
1,400,385	+		ABIE41_RS06835	0.33	-0.5
1,400,385	+		ABIE41_RS06835	0.33	+0.4
1,400,385	+		ABIE41_RS06835	0.33	-1.0
1,400,385	+		ABIE41_RS06835	0.33	+0.2
1,400,385	+		ABIE41_RS06835	0.33	-0.2
1,400,385	+		ABIE41_RS06835	0.33	-0.7
1,400,385	+		ABIE41_RS06835	0.33	-0.0
1,400,385	+		ABIE41_RS06835	0.33	-0.0
1,400,385	+		ABIE41_RS06835	0.33	+0.1
1,400,385	+		ABIE41_RS06835	0.33	+0.5
1,400,385	+		ABIE41_RS06835	0.33	-0.3
1,400,385	+		ABIE41_RS06835	0.33	+0.2
1,400,386	-		ABIE41_RS06835	0.33	+0.1
1,400,386	-		ABIE41_RS06835	0.33	+0.0
1,400,386	-		ABIE41_RS06835	0.33	-0.0
1,400,386	-		ABIE41_RS06835	0.33	+0.2
1,400,386	-		ABIE41_RS06835	0.33	-1.9
1,400,386	-		ABIE41_RS06835	0.33	+0.6
1,400,386	-		ABIE41_RS06835	0.33	-0.3
1,400,386	-		ABIE41_RS06835	0.33	-0.5
1,400,386	-		ABIE41_RS06835	0.33	+0.5
1,400,386	-		ABIE41_RS06835	0.33	+0.2
1,400,386	-		ABIE41_RS06835	0.33	+0.7
1,400,386	-		ABIE41_RS06835	0.33	+0.4
1,400,406	+		ABIE41_RS06835	0.35	-0.8
1,400,406	+		ABIE41_RS06835	0.35	+0.1
1,400,406	+		ABIE41_RS06835	0.35	-0.1
1,400,406	+		ABIE41_RS06835	0.35	+0.4
1,400,407	-		ABIE41_RS06835	0.35	-2.0
1,400,407	-		ABIE41_RS06835	0.35	-0.3
1,400,442	+		ABIE41_RS06835	0.39	-0.3
1,400,442	+		ABIE41_RS06835	0.39	+1.2
1,400,442	+		ABIE41_RS06835	0.39	-1.1
1,400,442	+		ABIE41_RS06835	0.39	-0.3
1,400,442	+		ABIE41_RS06835	0.39	+0.3
1,400,442	+		ABIE41_RS06835	0.39	-0.6
1,400,443	-		ABIE41_RS06835	0.39	+0.2
1,400,443	-		ABIE41_RS06835	0.39	+0.1
1,400,443	-		ABIE41_RS06835	0.39	+0.4
1,400,562	+		ABIE41_RS06835	0.50	-0.7
1,400,562	+		ABIE41_RS06835	0.50	-0.2
1,400,562	+		ABIE41_RS06835	0.50	+1.0
1,400,562	+		ABIE41_RS06835	0.50	+0.1
1,400,562	+		ABIE41_RS06835	0.50	-0.0
1,400,562	+		ABIE41_RS06835	0.50	-0.9
1,400,562	+		ABIE41_RS06835	0.50	-0.1
1,400,562	+		ABIE41_RS06835	0.50	+0.4
1,400,562	+		ABIE41_RS06835	0.50	-0.3
1,400,562	+		ABIE41_RS06835	0.50	-0.1
1,400,562	+		ABIE41_RS06835	0.50	-1.0
1,400,563	-		ABIE41_RS06835	0.50	-2.3
1,400,563	-		ABIE41_RS06835	0.50	+0.2
1,400,563	-		ABIE41_RS06835	0.50	+0.0
1,400,563	-		ABIE41_RS06835	0.50	+0.1
1,400,563	-		ABIE41_RS06835	0.50	+0.8
1,400,563	-		ABIE41_RS06835	0.50	+0.5
1,400,563	-		ABIE41_RS06835	0.50	-0.4
1,400,563	-		ABIE41_RS06835	0.50	+0.4
1,400,646	+		ABIE41_RS06835	0.58	-0.1
1,400,646	+		ABIE41_RS06835	0.58	+0.1
1,400,646	+		ABIE41_RS06835	0.58	+0.1
1,400,647	-		ABIE41_RS06835	0.58	+0.1
1,400,647	-		ABIE41_RS06835	0.58	-0.1
1,400,675	-		ABIE41_RS06835	0.61	+0.1
1,400,675	-		ABIE41_RS06835	0.61	-1.3
1,400,675	-		ABIE41_RS06835	0.61	-1.9
1,400,811	+		ABIE41_RS06835	0.73	+1.7
1,400,811	+		ABIE41_RS06835	0.73	-0.1
1,400,812	-		ABIE41_RS06835	0.74	-0.3
1,400,812	-		ABIE41_RS06835	0.74	-0.9
1,400,910	+		ABIE41_RS06835	0.83	-2.2
1,400,910	+		ABIE41_RS06835	0.83	+0.2
1,400,910	+		ABIE41_RS06835	0.83	-0.1
1,400,910	+		ABIE41_RS06835	0.83	+2.1
1,400,910	+		ABIE41_RS06835	0.83	+0.9
1,400,910	+		ABIE41_RS06835	0.83	-1.4
1,400,910	+		ABIE41_RS06835	0.83	-0.5
1,400,910	+		ABIE41_RS06835	0.83	-1.5
1,400,910	+		ABIE41_RS06835	0.83	+0.8
1,400,910	+		ABIE41_RS06835	0.83	-0.3
1,400,911	-		ABIE41_RS06835	0.83	+0.4
1,400,911	-		ABIE41_RS06835	0.83	-0.2
1,400,911	-		ABIE41_RS06835	0.83	-0.8
1,400,911	-		ABIE41_RS06835	0.83	+0.6
1,400,911	-		ABIE41_RS06835	0.83	+0.3
1,400,911	-		ABIE41_RS06835	0.83	-1.3
1,400,911	-		ABIE41_RS06835	0.83	-1.2
1,400,911	-		ABIE41_RS06835	0.83	-2.0
1,400,911	-		ABIE41_RS06835	0.83	+0.1
1,401,010	+				+0.4
1,401,010	+				+2.1
1,401,010	+				-0.3
1,401,010	+				-0.3
1,401,010	+				-1.5
1,401,010	+				-0.2
1,401,010	+				+0.2
1,401,010	+				-0.1
1,401,011	-				+1.0
1,401,011	-				+0.5
1,401,011	-				-0.8
1,401,011	-				+0.5
1,401,011	-				-0.9
1,401,011	-				-0.1
1,401,011	-				-0.3
1,401,011	-				-0.2
1,401,011	-				-0.0
1,401,011	-				+0.1
1,401,011	-				+1.7
1,401,011	-				+1.0
1,401,011	-				+0.4
1,401,198	+				+0.0
1,401,199	-				+1.0
1,401,199	-				-0.3
1,401,239	+				-1.8
1,401,240	-				-0.9
1,401,240	-				-1.8
1,401,268	-				+2.3
1,401,801	+		ABIE41_RS06840	0.39	-0.2
1,401,801	+		ABIE41_RS06840	0.39	+0.3
1,401,801	+		ABIE41_RS06840	0.39	-0.4
1,401,801	+		ABIE41_RS06840	0.39	-0.1
1,401,801	+		ABIE41_RS06840	0.39	-0.6
1,401,801	+		ABIE41_RS06840	0.39	-3.0
1,401,801	+		ABIE41_RS06840	0.39	-1.1
1,401,801	+		ABIE41_RS06840	0.39	-0.6
1,401,801	+		ABIE41_RS06840	0.39	+0.2
1,401,801	+		ABIE41_RS06840	0.39	+0.2
1,401,801	+		ABIE41_RS06840	0.39	-0.7
1,401,801	+		ABIE41_RS06840	0.39	-0.0
1,401,801	+		ABIE41_RS06840	0.39	-0.4
1,401,801	+		ABIE41_RS06840	0.39	+0.1
1,401,801	+		ABIE41_RS06840	0.39	-0.1
1,401,801	+		ABIE41_RS06840	0.39	+0.1
1,401,801	+		ABIE41_RS06840	0.39	+0.8
1,401,801	+		ABIE41_RS06840	0.39	+0.9
1,401,801	+		ABIE41_RS06840	0.39	-0.6
1,401,801	+		ABIE41_RS06840	0.39	+0.1
1,401,801	+		ABIE41_RS06840	0.39	+0.5
1,401,801	+		ABIE41_RS06840	0.39	+0.4
1,401,801	+		ABIE41_RS06840	0.39	+0.1
1,401,801	+		ABIE41_RS06840	0.39	-0.3
1,401,801	+		ABIE41_RS06840	0.39	-0.6
1,401,801	+		ABIE41_RS06840	0.39	-1.9
1,401,802	-		ABIE41_RS06840	0.39	+1.2
1,401,802	-		ABIE41_RS06840	0.39	-1.3
1,401,802	-		ABIE41_RS06840	0.39	+0.0
1,401,802	-		ABIE41_RS06840	0.39	-1.2
1,401,802	-		ABIE41_RS06840	0.39	-0.2
1,401,802	-		ABIE41_RS06840	0.39	+0.1
1,401,802	-		ABIE41_RS06840	0.39	-0.6
1,401,802	-		ABIE41_RS06840	0.39	+0.2
1,401,802	-		ABIE41_RS06840	0.39	+0.4
1,401,802	-		ABIE41_RS06840	0.39	+0.0
1,401,802	-		ABIE41_RS06840	0.39	+0.6
1,401,802	-		ABIE41_RS06840	0.39	-1.9
1,401,802	-		ABIE41_RS06840	0.39	-0.2
1,401,802	-		ABIE41_RS06840	0.39	+0.3
1,401,802	-		ABIE41_RS06840	0.39	+1.0
1,401,802	-		ABIE41_RS06840	0.39	-0.6
1,401,802	-		ABIE41_RS06840	0.39	+0.4
1,401,802	-		ABIE41_RS06840	0.39	-0.4
1,401,802	-		ABIE41_RS06840	0.39	-1.3
1,401,802	-		ABIE41_RS06840	0.39	-0.0
1,401,802	-		ABIE41_RS06840	0.39	-0.3
1,401,802	-		ABIE41_RS06840	0.39	-0.1
1,401,802	-		ABIE41_RS06840	0.39	-0.6
1,401,802	-		ABIE41_RS06840	0.39	+0.1
1,401,802	-		ABIE41_RS06840	0.39	-2.3
1,401,802	-		ABIE41_RS06840	0.39	+0.2
1,401,802	-		ABIE41_RS06840	0.39	+0.3
1,401,802	-		ABIE41_RS06840	0.39	-0.1
1,401,802	-		ABIE41_RS06840	0.39	-0.2
1,401,802	-		ABIE41_RS06840	0.39	-0.2
1,401,820	+		ABIE41_RS06840	0.41	-0.1
1,401,820	+		ABIE41_RS06840	0.41	-0.1
1,401,821	-		ABIE41_RS06840	0.41	-0.4
1,401,821	-		ABIE41_RS06840	0.41	+1.7
1,401,821	-		ABIE41_RS06840	0.41	+0.4
1,401,821	-		ABIE41_RS06840	0.41	-0.5
1,401,821	-		ABIE41_RS06840	0.41	-1.2
1,401,975	+		ABIE41_RS06840	0.53	-0.1
1,401,975	+		ABIE41_RS06840	0.53	+0.1
1,401,976	-		ABIE41_RS06840	0.53	-0.1