Strain Fitness in Escherichia coli ECRC101 around MCAODC_25435

Experiment: Bas06

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas06
1,808,947	+	glnH	MCAODC_25425	0.74	-0.3
1,809,018	+	glnH	MCAODC_25425	0.83	+1.3
1,809,097	+				+0.6
1,809,097	+				+0.1
1,809,098	-				-2.3
1,809,098	-				-0.6
1,809,140	-				+4.8
1,809,198	+				-0.9
1,809,198	+				-0.5
1,809,198	+				-0.2
1,809,198	+				-0.4
1,809,232	-				-0.9
1,809,232	-				+1.0
1,809,232	-				-1.9
1,809,232	-				-0.3
1,809,254	+				-0.8
1,809,254	+				+0.6
1,809,255	-				+0.6
1,809,255	-				-1.2
1,809,255	-				+0.9
1,809,255	-				+0.5
1,809,255	-				-0.1
1,809,264	+				+1.9
1,809,278	+				-3.1
1,809,278	+				+0.6
1,809,278	+				+0.2
1,809,278	+				+1.3
1,809,278	+				-2.5
1,809,278	+				+0.5
1,809,278	+				-0.8
1,809,279	-				+0.3
1,809,279	-				-0.1
1,809,279	-				+1.0
1,809,279	-				-0.0
1,809,279	-				+0.3
1,809,299	+				-1.3
1,809,300	-				-0.2
1,809,427	+	glnP	MCAODC_25430	0.22	-0.2
1,809,476	+	glnP	MCAODC_25430	0.30	-0.1
1,809,476	+	glnP	MCAODC_25430	0.30	+0.5
1,809,477	-	glnP	MCAODC_25430	0.30	-0.6
1,809,477	-	glnP	MCAODC_25430	0.30	-1.8
1,809,497	+	glnP	MCAODC_25430	0.33	-2.7
1,809,549	-	glnP	MCAODC_25430	0.41	-0.3
1,809,588	+	glnP	MCAODC_25430	0.47	-1.9
1,809,716	+	glnP	MCAODC_25430	0.66	-0.0
1,809,870	+	glnP	MCAODC_25430	0.90	+1.5
1,809,870	+	glnP	MCAODC_25430	0.90	-0.3
1,809,871	-	glnP	MCAODC_25430	0.90	-1.2
1,810,174	+	glnQ	MCAODC_25435	0.33	-1.2
1,810,174	+	glnQ	MCAODC_25435	0.33	-1.7
1,810,175	-	glnQ	MCAODC_25435	0.33	-2.0
1,810,193	+	glnQ	MCAODC_25435	0.36	-1.8
1,810,193	+	glnQ	MCAODC_25435	0.36	+1.2
1,810,468	+	glnQ	MCAODC_25435	0.74	-1.0
1,810,642	-				-1.7
1,810,691	-				+0.4
1,810,734	+				+0.5
1,810,734	+				+0.1
1,810,734	+				-1.9
1,810,734	+				+0.6
1,810,734	+				-1.3
1,810,735	-				+1.5
1,810,735	-				-1.1
1,810,735	-				-0.3
1,810,735	-				+0.5
1,810,735	-				-0.7
1,810,735	-				-0.1
1,810,735	-				+0.8
1,810,736	+				-1.6
1,810,736	+				+0.8
1,810,736	+				-0.2
1,810,736	+				-0.0
1,810,737	-				-1.6
1,810,737	-				-0.3
1,810,737	-				-1.7
1,810,737	-				+0.4
1,810,737	-				-1.1
1,810,737	-				+0.2
1,810,836	-				+0.4
1,810,919	-				+0.5
1,811,161	-	ybiO	MCAODC_25440	0.17	-0.8
1,811,161	-	ybiO	MCAODC_25440	0.17	-0.1
1,811,213	+	ybiO	MCAODC_25440	0.20	-1.7
1,811,214	-	ybiO	MCAODC_25440	0.20	-0.7
1,811,227	+	ybiO	MCAODC_25440	0.20	-0.9
1,811,347	-	ybiO	MCAODC_25440	0.26	-2.3
1,811,489	+	ybiO	MCAODC_25440	0.32	+2.4
1,811,492	+	ybiO	MCAODC_25440	0.32	+0.3
1,811,492	+	ybiO	MCAODC_25440	0.32	+3.8
1,811,597	+	ybiO	MCAODC_25440	0.37	+1.8
1,811,628	+	ybiO	MCAODC_25440	0.38	-0.0
1,811,628	+	ybiO	MCAODC_25440	0.38	+1.3
1,811,635	-	ybiO	MCAODC_25440	0.39	+0.5
1,811,648	+	ybiO	MCAODC_25440	0.39	-0.0
1,811,648	+	ybiO	MCAODC_25440	0.39	-0.0
1,811,649	-	ybiO	MCAODC_25440	0.39	-0.2
1,811,649	-	ybiO	MCAODC_25440	0.39	-0.6
1,811,649	-	ybiO	MCAODC_25440	0.39	-1.7
1,811,649	-	ybiO	MCAODC_25440	0.39	+0.2
1,811,654	+	ybiO	MCAODC_25440	0.40	+2.4