Strain Fitness in Escherichia coli ECRC101 around MCAODC_13430

Experiment: Bas06

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas06
2,624,074	+		MCAODC_13420	0.88	+2.2
2,624,116	+				+2.7
2,624,117	-				+1.5
2,624,117	-				+1.4
2,624,224	+				+1.7
2,624,515	-		MCAODC_13425	0.45	-2.2
2,624,523	+		MCAODC_13425	0.46	+1.7
2,624,537	+		MCAODC_13425	0.47	+1.0
2,624,612	-		MCAODC_13425	0.57	+2.1
2,624,615	+		MCAODC_13425	0.57	+1.6
2,624,616	-		MCAODC_13425	0.57	+0.8
2,624,616	-		MCAODC_13425	0.57	+3.0
2,624,616	-		MCAODC_13425	0.57	+2.4
2,624,616	-		MCAODC_13425	0.57	+1.7
2,624,624	+		MCAODC_13425	0.58	+0.5
2,624,625	-		MCAODC_13425	0.58	-0.6
2,624,831	+		MCAODC_13425	0.84	-0.1
2,624,882	+				+3.6
2,624,882	+				+1.9
2,624,883	-				+2.2
2,624,883	-				+1.5
2,624,883	-				+2.3
2,624,924	+				+0.5
2,624,925	-				+0.8
2,625,021	+				+1.8
2,625,066	-				+2.5
2,625,142	-		MCAODC_13430	0.12	+0.2
2,625,148	-		MCAODC_13430	0.12	+2.3
2,625,148	-		MCAODC_13430	0.12	+2.3
2,625,193	-		MCAODC_13430	0.15	+2.7
2,625,196	+		MCAODC_13430	0.15	+1.7
2,625,215	+		MCAODC_13430	0.16	+2.1
2,625,373	+		MCAODC_13430	0.25	+2.5
2,625,375	+		MCAODC_13430	0.25	+0.5
2,625,375	+		MCAODC_13430	0.25	+1.8
2,625,376	-		MCAODC_13430	0.25	+2.8
2,625,447	+		MCAODC_13430	0.30	+1.7
2,625,448	-		MCAODC_13430	0.30	+2.3
2,625,516	+		MCAODC_13430	0.34	+1.9
2,625,516	+		MCAODC_13430	0.34	+2.6
2,625,584	-		MCAODC_13430	0.38	+3.1
2,625,626	+		MCAODC_13430	0.40	+2.9
2,625,626	+		MCAODC_13430	0.40	+1.9
2,625,627	-		MCAODC_13430	0.40	+1.9
2,625,648	+		MCAODC_13430	0.41	+2.7
2,625,649	-		MCAODC_13430	0.41	+2.2
2,625,662	-		MCAODC_13430	0.42	+1.1
2,625,681	+		MCAODC_13430	0.43	+2.9
2,625,685	+		MCAODC_13430	0.44	+1.7
2,625,685	+		MCAODC_13430	0.44	+0.9
2,625,686	-		MCAODC_13430	0.44	+0.3
2,625,686	-		MCAODC_13430	0.44	+0.7
2,625,778	-		MCAODC_13430	0.49	+2.6
2,625,800	-		MCAODC_13430	0.50	+1.7
2,625,800	-		MCAODC_13430	0.50	+1.1
2,625,800	-		MCAODC_13430	0.50	+2.2
2,625,907	-		MCAODC_13430	0.57	-1.5
2,625,966	+		MCAODC_13430	0.60	+2.1
2,625,982	-		MCAODC_13430	0.61	+0.1
2,626,009	-		MCAODC_13430	0.63	+3.2
2,626,009	-		MCAODC_13430	0.63	+1.6
2,626,039	+		MCAODC_13430	0.64	+2.1
2,626,078	+		MCAODC_13430	0.67	-2.7
2,626,152	+		MCAODC_13430	0.71	+0.7
2,626,230	+		MCAODC_13430	0.76	+1.5
2,626,230	+		MCAODC_13430	0.76	+0.9
2,626,231	-		MCAODC_13430	0.76	+1.9
2,626,231	-		MCAODC_13430	0.76	+1.1
2,626,234	+		MCAODC_13430	0.76	+2.6
2,626,234	+		MCAODC_13430	0.76	+2.8
2,626,234	+		MCAODC_13430	0.76	+2.2
2,626,234	+		MCAODC_13430	0.76	+1.6
2,626,234	+		MCAODC_13430	0.76	+0.5
2,626,234	+		MCAODC_13430	0.76	+4.1
2,626,234	+		MCAODC_13430	0.76	+2.7
2,626,234	+		MCAODC_13430	0.76	+2.3
2,626,235	-		MCAODC_13430	0.76	+1.0
2,626,235	-		MCAODC_13430	0.76	+1.6
2,626,235	-		MCAODC_13430	0.76	+0.0
2,626,236	+		MCAODC_13430	0.76	+0.9
2,626,263	+		MCAODC_13430	0.77	+1.8
2,626,264	-		MCAODC_13430	0.78	+0.8
2,626,266	+		MCAODC_13430	0.78	+3.3
2,626,318	+		MCAODC_13430	0.81	+1.1
2,626,318	+		MCAODC_13430	0.81	+2.5
2,626,318	+		MCAODC_13430	0.81	+1.4
2,626,318	+		MCAODC_13430	0.81	+3.1
2,626,318	+		MCAODC_13430	0.81	+2.3
2,626,318	+		MCAODC_13430	0.81	+0.7
2,626,318	+		MCAODC_13430	0.81	+2.1
2,626,319	-		MCAODC_13430	0.81	+1.0
2,626,319	-		MCAODC_13430	0.81	+1.8
2,626,319	-		MCAODC_13430	0.81	+2.1
2,626,319	-		MCAODC_13430	0.81	+2.9
2,626,319	-		MCAODC_13430	0.81	+1.6
2,626,320	+		MCAODC_13430	0.81	+2.1
2,626,320	+		MCAODC_13430	0.81	+3.3
2,626,321	-		MCAODC_13430	0.81	+1.9
2,626,321	-		MCAODC_13430	0.81	+1.9
2,626,321	-		MCAODC_13430	0.81	+0.6
2,626,324	+		MCAODC_13430	0.81	+3.0
2,626,324	+		MCAODC_13430	0.81	+2.3
2,626,325	-		MCAODC_13430	0.81	+3.6
2,626,325	-		MCAODC_13430	0.81	+0.8
2,626,325	-		MCAODC_13430	0.81	+1.4
2,626,351	+		MCAODC_13430	0.83	+1.4
2,626,351	+		MCAODC_13430	0.83	+1.0
2,626,352	-		MCAODC_13430	0.83	+2.9
2,626,362	+		MCAODC_13430	0.83	+1.8
2,626,438	-		MCAODC_13430	0.88	+2.1
2,626,489	+				+0.5
2,626,489	+				-0.2
2,626,489	+				+1.9
2,626,489	+				+2.4
2,626,489	+				+1.6
2,626,489	+				+1.0
2,626,489	+				+2.6
2,626,490	-				+1.6
2,626,490	-				+2.8
2,626,490	-				+1.5
2,626,490	-				+3.4
2,626,490	-				-2.2
2,626,490	-				+3.0
2,626,490	-				+2.0
2,626,556	-				+1.2
2,626,556	-				+1.6
2,626,739	+				+2.0
2,626,789	-				+3.6
2,626,791	+				+3.1
2,626,791	+				+1.2
2,626,791	+				-0.5
2,626,792	-				+1.6
2,626,792	-				+2.5
2,626,792	-				+1.4
2,626,820	+				+1.3
2,626,821	-				+1.9
2,626,828	+				+2.8
2,626,882	+		MCAODC_13435	0.11	-1.1
2,626,883	-		MCAODC_13435	0.11	+3.2
2,626,883	-		MCAODC_13435	0.11	+2.9
2,626,928	-		MCAODC_13435	0.13	+2.6
2,626,955	+		MCAODC_13435	0.14	+2.5
2,626,956	-		MCAODC_13435	0.14	+2.5
2,627,021	+		MCAODC_13435	0.17	+1.9
2,627,022	-		MCAODC_13435	0.17	+3.1
2,627,040	+		MCAODC_13435	0.18	+0.9
2,627,114	+		MCAODC_13435	0.22	+1.2
2,627,114	+		MCAODC_13435	0.22	+2.0
2,627,123	+		MCAODC_13435	0.22	+3.0
2,627,124	-		MCAODC_13435	0.22	+2.4
2,627,124	-		MCAODC_13435	0.22	+1.5
2,627,124	-		MCAODC_13435	0.22	+3.3
2,627,124	-		MCAODC_13435	0.22	+2.7
2,627,124	-		MCAODC_13435	0.22	+3.6
2,627,124	-		MCAODC_13435	0.22	+3.0
2,627,176	+		MCAODC_13435	0.25	+2.9
2,627,234	+		MCAODC_13435	0.27	+2.1
2,627,234	+		MCAODC_13435	0.27	+1.6
2,627,234	+		MCAODC_13435	0.27	+2.4
2,627,234	+		MCAODC_13435	0.27	+3.4
2,627,266	-		MCAODC_13435	0.29	+2.1
2,627,349	+		MCAODC_13435	0.33	+2.7
2,627,429	+		MCAODC_13435	0.36	+1.2
2,627,429	+		MCAODC_13435	0.36	+3.0
2,627,429	+		MCAODC_13435	0.36	+1.9
2,627,430	-		MCAODC_13435	0.37	+0.1
2,627,430	-		MCAODC_13435	0.37	+2.0
2,627,591	+		MCAODC_13435	0.44	+2.4
2,627,591	+		MCAODC_13435	0.44	+2.9
2,627,591	+		MCAODC_13435	0.44	+2.6
2,627,592	-		MCAODC_13435	0.44	+2.5
2,627,592	-		MCAODC_13435	0.44	+1.6
2,627,592	-		MCAODC_13435	0.44	+1.6
2,627,609	+		MCAODC_13435	0.45	+1.7