Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18550

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
3,817,954	-		ABIE41_RS18545	0.18	+1.0
3,818,091	+		ABIE41_RS18545	0.32	-0.1
3,818,091	+		ABIE41_RS18545	0.32	-0.2
3,818,091	+		ABIE41_RS18545	0.32	+0.0
3,818,092	-		ABIE41_RS18545	0.32	-0.3
3,818,163	+		ABIE41_RS18545	0.39	-0.6
3,818,503	+		ABIE41_RS18545	0.74	+0.0
3,818,503	+		ABIE41_RS18545	0.74	+0.6
3,818,503	+		ABIE41_RS18545	0.74	+1.0
3,818,503	+		ABIE41_RS18545	0.74	-2.8
3,818,504	-		ABIE41_RS18545	0.74	+2.0
3,818,504	-		ABIE41_RS18545	0.74	+0.6
3,818,504	-		ABIE41_RS18545	0.74	-0.5
3,818,504	-		ABIE41_RS18545	0.74	-0.3
3,818,631	+		ABIE41_RS18545	0.87	-1.2
3,818,631	+		ABIE41_RS18545	0.87	-0.6
3,818,632	-		ABIE41_RS18545	0.87	-0.7
3,818,632	-		ABIE41_RS18545	0.87	-2.4
3,818,755	+				-0.5
3,818,756	-				-1.5
3,818,756	-				-1.5
3,818,860	-				+0.2
3,818,992	+		ABIE41_RS18550	0.18	-0.8
3,818,999	+		ABIE41_RS18550	0.19	+1.2
3,818,999	+		ABIE41_RS18550	0.19	-0.4
3,818,999	+		ABIE41_RS18550	0.19	-2.9
3,818,999	+		ABIE41_RS18550	0.19	+0.5
3,818,999	+		ABIE41_RS18550	0.19	-0.6
3,819,000	-		ABIE41_RS18550	0.19	-1.0
3,819,079	+		ABIE41_RS18550	0.30	-0.6
3,819,079	+		ABIE41_RS18550	0.30	+0.2
3,819,079	+		ABIE41_RS18550	0.30	-1.1
3,819,079	+		ABIE41_RS18550	0.30	+0.0
3,819,079	+		ABIE41_RS18550	0.30	-1.2
3,819,079	+		ABIE41_RS18550	0.30	-0.8
3,819,079	+		ABIE41_RS18550	0.30	-0.2
3,819,080	-		ABIE41_RS18550	0.31	-1.8
3,819,080	-		ABIE41_RS18550	0.31	-2.1
3,819,080	-		ABIE41_RS18550	0.31	+0.3
3,819,080	-		ABIE41_RS18550	0.31	+0.8
3,819,080	-		ABIE41_RS18550	0.31	-0.2
3,819,080	-		ABIE41_RS18550	0.31	+0.3
3,819,256	+		ABIE41_RS18550	0.55	-0.2
3,819,725	+		ABIE41_RS18555	0.62	+0.5
3,819,725	+		ABIE41_RS18555	0.62	+1.8
3,819,725	+		ABIE41_RS18555	0.62	+1.2
3,819,726	-		ABIE41_RS18555	0.63	-1.6
3,819,726	-		ABIE41_RS18555	0.63	+2.0
3,819,756	-		ABIE41_RS18555	0.77	+1.8
3,819,837	+				-0.3
3,819,837	+				-0.1
3,819,837	+				+0.1
3,819,837	+				+2.1
3,819,837	+				-0.3
3,819,837	+				-0.4
3,819,838	-				-0.0
3,819,838	-				+1.8
3,819,838	-				+0.1
3,819,839	+				-2.0
3,819,839	+				+0.5
3,820,074	+				-1.5
3,820,074	+				+0.5
3,820,074	+				-0.7
3,820,095	+				+0.6
3,820,096	-				+1.2
3,820,096	-				-0.2
3,820,197	+				-0.5
3,820,197	+				-0.1
3,820,197	+				-1.3
3,820,197	+				+0.9
3,820,198	-				-0.7
3,820,198	-				+0.2
3,820,238	+		ABIE41_RS18560	0.10	+0.6
3,820,245	+		ABIE41_RS18560	0.10	-0.7
3,820,246	-		ABIE41_RS18560	0.10	+0.1
3,820,246	-		ABIE41_RS18560	0.10	-0.1
3,820,246	-		ABIE41_RS18560	0.10	-1.5
3,820,294	-		ABIE41_RS18560	0.12	-0.3
3,820,321	-		ABIE41_RS18560	0.14	-1.2
3,820,450	-		ABIE41_RS18560	0.19	-0.0