Strain Fitness in Bosea sp. OAE506 around ABIE41_RS16750

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
3,449,228	+		ABIE41_RS16745	0.50	-0.3
3,449,228	+		ABIE41_RS16745	0.50	-0.5
3,449,228	+		ABIE41_RS16745	0.50	+0.2
3,449,228	+		ABIE41_RS16745	0.50	-0.5
3,449,341	+		ABIE41_RS16745	0.60	-0.3
3,449,342	-		ABIE41_RS16745	0.60	+0.2
3,449,342	-		ABIE41_RS16745	0.60	-0.0
3,449,541	+		ABIE41_RS16745	0.78	+0.8
3,449,541	+		ABIE41_RS16745	0.78	-0.5
3,449,757	+				-0.8
3,449,758	-				-1.3
3,450,020	+				+0.1
3,450,021	-				-0.4
3,450,021	-				-0.0
3,450,093	+		ABIE41_RS16750	0.13	-0.2
3,450,153	-		ABIE41_RS16750	0.17	-2.0
3,450,171	+		ABIE41_RS16750	0.18	+0.1
3,450,173	+		ABIE41_RS16750	0.18	+1.2
3,450,173	+		ABIE41_RS16750	0.18	+0.1
3,450,173	+		ABIE41_RS16750	0.18	+0.7
3,450,173	+		ABIE41_RS16750	0.18	-1.4
3,450,174	-		ABIE41_RS16750	0.18	-0.2
3,450,174	-		ABIE41_RS16750	0.18	-0.6
3,450,174	-		ABIE41_RS16750	0.18	+0.5
3,450,174	-		ABIE41_RS16750	0.18	-2.6
3,450,290	+		ABIE41_RS16750	0.25	-0.4
3,450,375	-		ABIE41_RS16750	0.31	-0.7
3,450,441	-		ABIE41_RS16750	0.35	-0.6
3,450,441	-		ABIE41_RS16750	0.35	+0.3
3,450,509	+		ABIE41_RS16750	0.39	+0.4
3,450,510	-		ABIE41_RS16750	0.39	-0.2
3,450,510	-		ABIE41_RS16750	0.39	-0.5
3,450,524	+		ABIE41_RS16750	0.40	-1.4
3,450,525	-		ABIE41_RS16750	0.40	-0.0
3,450,650	+		ABIE41_RS16750	0.48	-0.4
3,450,998	+		ABIE41_RS16750	0.70	+0.5
3,451,251	-		ABIE41_RS16750	0.87	-2.1
3,451,251	-		ABIE41_RS16750	0.87	-0.1
3,451,343	+				-0.2
3,451,343	+				+0.1
3,451,343	+				+0.6
3,451,343	+				-0.2
3,451,343	+				-0.5
3,451,343	+				-0.5
3,451,343	+				-0.5
3,451,343	+				+0.0
3,451,344	-				-0.3
3,451,344	-				-0.1
3,451,344	-				-0.6
3,451,344	-				-0.6
3,451,344	-				-0.1
3,451,344	-				+0.2
3,451,344	-				-2.7
3,451,505	+				+0.4
3,451,505	+				+0.1
3,451,505	+				+0.1
3,451,506	-				+0.8
3,451,592	-				+0.3
3,452,008	+		ABIE41_RS16755	0.17	-2.0
3,452,008	+		ABIE41_RS16755	0.17	-0.3
3,452,008	+		ABIE41_RS16755	0.17	-0.3
3,452,008	+		ABIE41_RS16755	0.17	-0.9
3,452,008	+		ABIE41_RS16755	0.17	+0.4