Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12430

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,543,764	+		ABIE41_RS12420	0.59	-2.4
2,543,764	+		ABIE41_RS12420	0.59	-0.2
2,543,765	-		ABIE41_RS12420	0.59	+0.1
2,543,950	+		ABIE41_RS12420	0.73	-2.0
2,543,950	+		ABIE41_RS12420	0.73	-0.6
2,544,113	-		ABIE41_RS12420	0.85	+0.4
2,544,193	+				+0.5
2,544,194	-				-0.7
2,544,485	+		ABIE41_RS12425	0.54	+0.4
2,544,632	-				+0.1
2,544,717	+				+0.5
2,544,717	+				+0.6
2,544,717	+				+0.6
2,544,718	-				-0.5
2,544,718	-				-0.8
2,544,718	-				+0.4
2,544,718	-				+0.7
2,544,997	+		ABIE41_RS12430	0.33	-0.0
2,545,106	-		ABIE41_RS12430	0.44	-0.2
2,545,106	-		ABIE41_RS12430	0.44	-0.4
2,545,106	-		ABIE41_RS12430	0.44	-1.9
2,545,207	+		ABIE41_RS12430	0.55	+0.8
2,545,208	-		ABIE41_RS12430	0.55	+0.1
2,545,208	-		ABIE41_RS12430	0.55	-0.2
2,545,208	-		ABIE41_RS12430	0.55	+2.8
2,545,208	-		ABIE41_RS12430	0.55	-0.1
2,545,208	-		ABIE41_RS12430	0.55	-0.7
2,545,216	+		ABIE41_RS12430	0.56	+1.7
2,545,354	-		ABIE41_RS12430	0.70	+0.2
2,545,402	+		ABIE41_RS12430	0.75	-1.5
2,545,403	-		ABIE41_RS12430	0.75	+0.1
2,545,852	-		ABIE41_RS12435	0.17	+0.6
2,546,445	+		ABIE41_RS12435	0.67	+0.5
2,546,445	+		ABIE41_RS12435	0.67	-1.4
2,546,445	+		ABIE41_RS12435	0.67	-0.2
2,546,445	+		ABIE41_RS12435	0.67	-0.1
2,546,446	-		ABIE41_RS12435	0.67	-1.6
2,546,446	-		ABIE41_RS12435	0.67	-1.0
2,546,446	-		ABIE41_RS12435	0.67	-2.1
2,546,446	-		ABIE41_RS12435	0.67	-1.3
2,546,446	-		ABIE41_RS12435	0.67	-0.4
2,546,446	-		ABIE41_RS12435	0.67	-0.1
2,546,446	-		ABIE41_RS12435	0.67	-0.6