Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11265

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,314,498	+		ABIE41_RS11260	0.14	+0.7
2,314,831	+		ABIE41_RS11260	0.54	-2.0
2,314,831	+		ABIE41_RS11260	0.54	-1.0
2,314,831	+		ABIE41_RS11260	0.54	-0.7
2,314,831	+		ABIE41_RS11260	0.54	+0.2
2,314,832	-		ABIE41_RS11260	0.54	-0.2
2,314,832	-		ABIE41_RS11260	0.54	+0.2
2,314,832	-		ABIE41_RS11260	0.54	-0.0
2,314,832	-		ABIE41_RS11260	0.54	-1.7
2,315,054	-		ABIE41_RS11260	0.80	+0.1
2,315,099	+		ABIE41_RS11260	0.86	-1.0
2,315,099	+		ABIE41_RS11260	0.86	-0.6
2,315,099	+		ABIE41_RS11260	0.86	-0.3
2,315,100	-		ABIE41_RS11260	0.86	+0.0
2,315,100	-		ABIE41_RS11260	0.86	-4.3
2,315,100	-		ABIE41_RS11260	0.86	+0.1
2,315,100	-		ABIE41_RS11260	0.86	-0.5
2,315,100	-		ABIE41_RS11260	0.86	-0.1
2,315,100	-		ABIE41_RS11260	0.86	+0.0
2,315,100	-		ABIE41_RS11260	0.86	-0.5
2,315,101	+		ABIE41_RS11260	0.86	+0.8
2,315,101	+		ABIE41_RS11260	0.86	-1.4
2,315,102	-		ABIE41_RS11260	0.86	-1.1
2,315,278	+				-0.4
2,315,278	+				-0.8
2,315,791	-		ABIE41_RS11265	0.29	-0.3
2,315,886	-		ABIE41_RS11265	0.37	+1.4
2,315,886	-		ABIE41_RS11265	0.37	+0.2
2,315,887	+		ABIE41_RS11265	0.37	+0.0
2,315,908	-		ABIE41_RS11265	0.39	+1.2
2,316,095	+		ABIE41_RS11265	0.54	-0.1
2,316,095	+		ABIE41_RS11265	0.54	-0.2
2,316,096	-		ABIE41_RS11265	0.54	+0.5
2,316,096	-		ABIE41_RS11265	0.54	+2.0
2,316,096	-		ABIE41_RS11265	0.54	-0.1
2,316,113	+		ABIE41_RS11265	0.56	+0.2
2,316,113	+		ABIE41_RS11265	0.56	-0.3
2,316,114	-		ABIE41_RS11265	0.56	-0.2
2,316,114	-		ABIE41_RS11265	0.56	-0.1
2,316,114	-		ABIE41_RS11265	0.56	-0.3
2,316,246	-		ABIE41_RS11265	0.66	-0.8
2,316,246	-		ABIE41_RS11265	0.66	+0.4
2,316,246	-		ABIE41_RS11265	0.66	+0.3
2,316,407	+		ABIE41_RS11265	0.80	+0.2
2,316,536	+				+0.5
2,316,537	-				+0.4
2,317,135	+		ABIE41_RS11270	0.19	-1.9
2,317,135	+		ABIE41_RS11270	0.19	+0.2
2,317,136	-		ABIE41_RS11270	0.19	-1.1
2,317,136	-		ABIE41_RS11270	0.19	-1.2
2,317,187	+		ABIE41_RS11270	0.22	-1.9
2,317,187	+		ABIE41_RS11270	0.22	+0.2
2,317,188	-		ABIE41_RS11270	0.22	-1.4
2,317,188	-		ABIE41_RS11270	0.22	+0.2
2,317,283	+		ABIE41_RS11270	0.28	+0.9
2,317,284	-		ABIE41_RS11270	0.28	-0.4
2,317,284	-		ABIE41_RS11270	0.28	-0.5
2,317,292	+		ABIE41_RS11270	0.28	+0.8
2,317,292	+		ABIE41_RS11270	0.28	-1.2
2,317,293	-		ABIE41_RS11270	0.28	-1.3
2,317,296	-		ABIE41_RS11270	0.29	+1.0
2,317,376	+		ABIE41_RS11270	0.34	-1.6
2,317,376	+		ABIE41_RS11270	0.34	+0.7
2,317,377	-		ABIE41_RS11270	0.34	+0.8
2,317,481	+		ABIE41_RS11270	0.40	-2.4
2,317,481	+		ABIE41_RS11270	0.40	+0.4
2,317,482	-		ABIE41_RS11270	0.40	-0.8
2,317,482	-		ABIE41_RS11270	0.40	+1.9