Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11260

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,313,418	+		ABIE41_RS11255	0.15	+0.1
2,313,418	+		ABIE41_RS11255	0.15	+1.5
2,313,419	-		ABIE41_RS11255	0.15	-0.7
2,313,439	+		ABIE41_RS11255	0.17	+2.8
2,313,439	+		ABIE41_RS11255	0.17	+0.4
2,313,439	+		ABIE41_RS11255	0.17	+0.4
2,313,439	+		ABIE41_RS11255	0.17	+0.2
2,313,440	-		ABIE41_RS11255	0.17	+0.1
2,313,440	-		ABIE41_RS11255	0.17	+0.0
2,313,440	-		ABIE41_RS11255	0.17	+0.5
2,313,440	-		ABIE41_RS11255	0.17	+0.7
2,313,440	-		ABIE41_RS11255	0.17	-1.4
2,313,440	-		ABIE41_RS11255	0.17	-0.1
2,313,551	-		ABIE41_RS11255	0.27	-0.2
2,313,597	-		ABIE41_RS11255	0.31	-2.0
2,313,677	-		ABIE41_RS11255	0.39	+0.8
2,313,677	-		ABIE41_RS11255	0.39	-0.7
2,313,677	-		ABIE41_RS11255	0.39	+0.5
2,314,090	+		ABIE41_RS11255	0.76	+0.6
2,314,090	+		ABIE41_RS11255	0.76	-0.2
2,314,090	+		ABIE41_RS11255	0.76	-0.5
2,314,090	+		ABIE41_RS11255	0.76	-1.8
2,314,091	-		ABIE41_RS11255	0.76	+0.0
2,314,091	-		ABIE41_RS11255	0.76	+0.2
2,314,091	-		ABIE41_RS11255	0.76	-3.1
2,314,091	-		ABIE41_RS11255	0.76	+0.3
2,314,091	-		ABIE41_RS11255	0.76	-0.4
2,314,123	+		ABIE41_RS11255	0.79	+1.2
2,314,123	+		ABIE41_RS11255	0.79	+0.2
2,314,141	+		ABIE41_RS11255	0.81	-0.2
2,314,141	+		ABIE41_RS11255	0.81	+0.9
2,314,141	+		ABIE41_RS11255	0.81	+0.4
2,314,141	+		ABIE41_RS11255	0.81	-1.8
2,314,142	-		ABIE41_RS11255	0.81	-1.6
2,314,142	-		ABIE41_RS11255	0.81	+1.2
2,314,366	+				+0.0
2,314,366	+				-0.9
2,314,366	+				-0.4
2,314,366	+				+0.6
2,314,367	-				+0.4
2,314,367	-				-0.4
2,314,498	+		ABIE41_RS11260	0.14	+0.7
2,314,831	+		ABIE41_RS11260	0.54	-2.0
2,314,831	+		ABIE41_RS11260	0.54	-1.0
2,314,831	+		ABIE41_RS11260	0.54	-0.7
2,314,831	+		ABIE41_RS11260	0.54	+0.2
2,314,832	-		ABIE41_RS11260	0.54	-0.2
2,314,832	-		ABIE41_RS11260	0.54	+0.2
2,314,832	-		ABIE41_RS11260	0.54	-0.0
2,314,832	-		ABIE41_RS11260	0.54	-1.7
2,315,054	-		ABIE41_RS11260	0.80	+0.1
2,315,099	+		ABIE41_RS11260	0.86	-1.0
2,315,099	+		ABIE41_RS11260	0.86	-0.6
2,315,099	+		ABIE41_RS11260	0.86	-0.3
2,315,100	-		ABIE41_RS11260	0.86	+0.0
2,315,100	-		ABIE41_RS11260	0.86	-4.3
2,315,100	-		ABIE41_RS11260	0.86	+0.1
2,315,100	-		ABIE41_RS11260	0.86	-0.5
2,315,100	-		ABIE41_RS11260	0.86	-0.1
2,315,100	-		ABIE41_RS11260	0.86	+0.0
2,315,100	-		ABIE41_RS11260	0.86	-0.5
2,315,101	+		ABIE41_RS11260	0.86	+0.8
2,315,101	+		ABIE41_RS11260	0.86	-1.4
2,315,102	-		ABIE41_RS11260	0.86	-1.1
2,315,278	+				-0.4
2,315,278	+				-0.8
2,315,791	-		ABIE41_RS11265	0.29	-0.3
2,315,886	-		ABIE41_RS11265	0.37	+1.4
2,315,886	-		ABIE41_RS11265	0.37	+0.2
2,315,887	+		ABIE41_RS11265	0.37	+0.0
2,315,908	-		ABIE41_RS11265	0.39	+1.2
2,316,095	+		ABIE41_RS11265	0.54	-0.1
2,316,095	+		ABIE41_RS11265	0.54	-0.2
2,316,096	-		ABIE41_RS11265	0.54	+0.5
2,316,096	-		ABIE41_RS11265	0.54	+2.0
2,316,096	-		ABIE41_RS11265	0.54	-0.1
2,316,113	+		ABIE41_RS11265	0.56	+0.2
2,316,113	+		ABIE41_RS11265	0.56	-0.3
2,316,114	-		ABIE41_RS11265	0.56	-0.2
2,316,114	-		ABIE41_RS11265	0.56	-0.1
2,316,114	-		ABIE41_RS11265	0.56	-0.3