Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06740

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,381,901	+				+0.6
1,382,096	+				+0.1
1,382,096	+				+1.9
1,382,096	+				+0.1
1,382,096	+				-1.3
1,382,097	-				-1.2
1,382,097	-				-0.5
1,382,097	-				-1.7
1,382,097	-				-1.2
1,382,097	-				-0.2
1,382,156	+				-1.0
1,382,156	+				+0.6
1,382,156	+				-1.3
1,382,156	+				+0.5
1,382,157	-				-0.7
1,382,157	-				+0.3
1,382,157	-				+0.4
1,382,157	-				+0.2
1,382,157	-				-0.1
1,382,157	-				-0.2
1,382,175	+				-0.5
1,382,175	+				-0.8
1,382,175	+				+1.6
1,382,175	+				+0.4
1,382,176	-				+0.5
1,382,176	-				+0.3
1,382,176	-				+0.2
1,382,226	+				-0.1
1,382,226	+				-0.0
1,382,226	+				-1.8
1,382,227	-				+0.0
1,382,227	-				+1.2
1,382,227	-				+1.2
1,382,227	-				+0.3
1,382,227	-				-0.3
1,382,247	-				+0.9
1,382,247	-				+1.5
1,382,261	+				-0.5
1,382,264	-				-0.4
1,382,318	+		ABIE41_RS06740	0.19	-0.2
1,382,359	+		ABIE41_RS06740	0.32	-0.3
1,382,370	+		ABIE41_RS06740	0.36	+0.2
1,382,440	+		ABIE41_RS06740	0.58	-0.8
1,382,526	+		ABIE41_RS06740	0.85	-0.4
1,382,527	-		ABIE41_RS06740	0.85	-0.1
1,382,548	-				-2.2
1,382,603	+				-1.8
1,382,713	+				-0.3
1,382,714	-				-1.6
1,382,714	-				-0.6
1,382,739	+				+0.3
1,382,740	-				-0.3
1,382,761	+				+0.8
1,382,761	+				-1.6
1,382,762	-				-1.4
1,382,825	+		ABIE41_RS06745	0.17	-1.3
1,382,826	-		ABIE41_RS06745	0.17	-0.5
1,382,847	+		ABIE41_RS06745	0.27	-0.2
1,382,938	+		ABIE41_RS06745	0.68	+0.4
1,382,938	+		ABIE41_RS06745	0.68	-0.2
1,382,938	+		ABIE41_RS06745	0.68	-0.5
1,382,948	-		ABIE41_RS06745	0.73	-0.7
1,382,948	-		ABIE41_RS06745	0.73	-1.7
1,383,021	+				-0.1
1,383,021	+				+0.3
1,383,021	+				-0.0
1,383,021	+				+0.9
1,383,022	-				-0.7
1,383,033	+				-1.0
1,383,033	+				+0.6
1,383,034	-				-0.1
1,383,034	-				-0.1
1,383,034	-				+1.2
1,383,034	-				-2.1
1,383,034	-				+0.3
1,383,076	+				-1.5
1,383,077	-				+0.4
1,383,087	+				-1.0
1,383,102	+				-1.1
1,383,102	+				-1.5
1,383,103	-				-0.2
1,383,189	+				-0.0
1,383,189	+				-0.2
1,383,189	+				+0.8
1,383,189	+				+0.5
1,383,189	+				-0.9
1,383,189	+				-0.0
1,383,190	-				+0.4
1,383,190	-				-0.6
1,383,190	-				-2.7
1,383,294	-				-0.6
1,383,425	+				-0.2
1,383,425	+				-0.4
1,383,425	+				-0.6
1,383,425	+				-0.4
1,383,425	+				-0.8
1,383,425	+				+0.1
1,383,425	+				+0.1
1,383,425	+				-0.8
1,383,426	-				+0.8
1,383,426	-				+0.7
1,383,426	-				-1.7
1,383,426	-				+0.3