Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06730

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,377,111	+		ABIE41_RS06720	0.16	+0.9
1,377,153	+		ABIE41_RS06720	0.25	+0.5
1,377,153	+		ABIE41_RS06720	0.25	-1.9
1,377,272	+		ABIE41_RS06720	0.52	-0.1
1,377,272	+		ABIE41_RS06720	0.52	+1.1
1,377,333	+		ABIE41_RS06720	0.66	+0.2
1,377,384	+		ABIE41_RS06720	0.77	-0.1
1,377,384	+		ABIE41_RS06720	0.77	+1.1
1,377,384	+		ABIE41_RS06720	0.77	+1.0
1,377,384	+		ABIE41_RS06720	0.77	+0.8
1,377,384	+		ABIE41_RS06720	0.77	-1.7
1,377,385	-		ABIE41_RS06720	0.77	-0.1
1,377,385	-		ABIE41_RS06720	0.77	-1.1
1,377,484	-				+0.4
1,377,488	-				-0.8
1,377,488	-				-0.7
1,377,488	-				-0.8
1,377,488	-				+0.3
1,377,491	+				-1.2
1,377,513	+		ABIE41_RS06725	0.14	+0.3
1,377,572	+		ABIE41_RS06725	0.37	+1.1
1,377,572	+		ABIE41_RS06725	0.37	-0.4
1,377,572	+		ABIE41_RS06725	0.37	+0.7
1,377,572	+		ABIE41_RS06725	0.37	-0.5
1,377,572	+		ABIE41_RS06725	0.37	+0.5
1,377,572	+		ABIE41_RS06725	0.37	-0.5
1,377,572	+		ABIE41_RS06725	0.37	-0.2
1,377,572	+		ABIE41_RS06725	0.37	-1.5
1,377,572	+		ABIE41_RS06725	0.37	+0.8
1,377,573	-		ABIE41_RS06725	0.37	-0.2
1,377,573	-		ABIE41_RS06725	0.37	+1.3
1,377,573	-		ABIE41_RS06725	0.37	+0.7
1,377,648	-		ABIE41_RS06725	0.66	-0.4
1,377,769	+				+0.3
1,377,769	+				-1.4
1,377,841	+				-0.8
1,377,841	+				+0.5
1,377,842	-				+0.1
1,377,842	-				+0.1
1,377,842	-				+0.0
1,377,842	-				+2.1
1,377,894	+				-1.2
1,377,894	+				+0.0
1,377,894	+				+0.8
1,377,895	-				-0.8
1,377,895	-				+0.6
1,377,947	+				-1.8
1,377,948	-				-0.8
1,378,001	+				+0.2
1,378,002	-				+0.2
1,378,019	+				+0.2
1,378,020	-				-1.4
1,378,020	-				-0.2
1,378,029	+				-0.4
1,378,029	+				-0.1
1,378,029	+				+0.2
1,378,030	-				+0.2
1,378,031	+				-2.5
1,378,032	-				-1.4
1,378,037	+				+0.0
1,378,037	+				-0.5
1,378,037	+				-2.5
1,378,038	-				+0.1
1,378,038	-				+1.4
1,378,085	+				-3.1
1,378,085	+				+0.8
1,378,154	+				-0.0
1,378,154	+				-0.1
1,378,154	+				-1.1
1,378,154	+				-0.5
1,378,154	+				-0.1
1,378,154	+				-0.8
1,378,154	+				+1.3
1,378,154	+				+1.6
1,378,155	-				-0.2
1,378,163	+				+1.5
1,378,163	+				+0.1
1,378,163	+				-0.9
1,378,163	+				-1.0
1,378,163	+				+0.3
1,378,163	+				-0.1
1,378,163	+				-0.7
1,378,163	+				-0.7
1,378,163	+				-1.5
1,378,163	+				-0.3
1,378,163	+				+0.1
1,378,163	+				-2.7
1,378,163	+				+1.4
1,378,163	+				-0.0
1,378,164	-				+0.3
1,378,164	-				-0.6
1,378,164	-				+0.4
1,378,164	-				-0.0
1,378,202	+		ABIE41_RS06730	0.13	+0.5
1,378,216	+		ABIE41_RS06730	0.14	+0.1
1,378,216	+		ABIE41_RS06730	0.14	+0.4
1,378,216	+		ABIE41_RS06730	0.14	+0.0
1,378,217	-		ABIE41_RS06730	0.15	+1.2
1,378,280	+		ABIE41_RS06730	0.21	+0.0
1,378,280	+		ABIE41_RS06730	0.21	-0.2
1,378,280	+		ABIE41_RS06730	0.21	-1.2
1,378,280	+		ABIE41_RS06730	0.21	+1.4
1,378,281	-		ABIE41_RS06730	0.21	+0.7
1,378,379	+		ABIE41_RS06730	0.30	+0.6
1,378,379	+		ABIE41_RS06730	0.30	+0.7
1,378,379	+		ABIE41_RS06730	0.30	+0.2
1,378,379	+		ABIE41_RS06730	0.30	-0.1
1,378,379	+		ABIE41_RS06730	0.30	-1.4
1,378,379	+		ABIE41_RS06730	0.30	+0.0
1,378,379	+		ABIE41_RS06730	0.30	+1.8
1,378,379	+		ABIE41_RS06730	0.30	+0.2
1,378,379	+		ABIE41_RS06730	0.30	-1.8
1,378,379	+		ABIE41_RS06730	0.30	-0.7
1,378,379	+		ABIE41_RS06730	0.30	-2.4
1,378,379	+		ABIE41_RS06730	0.30	+0.3
1,378,380	-		ABIE41_RS06730	0.30	-0.6
1,378,380	-		ABIE41_RS06730	0.30	+0.6
1,378,380	-		ABIE41_RS06730	0.30	+0.2
1,378,380	-		ABIE41_RS06730	0.30	+1.0
1,378,380	-		ABIE41_RS06730	0.30	-0.1
1,378,380	-		ABIE41_RS06730	0.30	+0.7
1,378,380	-		ABIE41_RS06730	0.30	+1.5
1,378,380	-		ABIE41_RS06730	0.30	+0.2
1,378,380	-		ABIE41_RS06730	0.30	+0.5
1,378,380	-		ABIE41_RS06730	0.30	+0.0
1,378,380	-		ABIE41_RS06730	0.30	-0.4
1,378,380	-		ABIE41_RS06730	0.30	-3.1
1,378,380	-		ABIE41_RS06730	0.30	+0.6
1,378,380	-		ABIE41_RS06730	0.30	-0.6
1,378,380	-		ABIE41_RS06730	0.30	-0.1
1,378,380	-		ABIE41_RS06730	0.30	+0.3
1,378,380	-		ABIE41_RS06730	0.30	+0.2
1,378,380	-		ABIE41_RS06730	0.30	+0.3
1,378,380	-		ABIE41_RS06730	0.30	+0.8
1,378,380	-		ABIE41_RS06730	0.30	-0.8
1,378,380	-		ABIE41_RS06730	0.30	+0.0
1,378,380	-		ABIE41_RS06730	0.30	-0.1
1,378,380	-		ABIE41_RS06730	0.30	+0.9
1,378,452	-		ABIE41_RS06730	0.37	-0.9
1,378,452	-		ABIE41_RS06730	0.37	+0.4
1,378,452	-		ABIE41_RS06730	0.37	-1.0
1,378,481	+		ABIE41_RS06730	0.40	-0.0
1,378,481	+		ABIE41_RS06730	0.40	-0.3
1,378,481	+		ABIE41_RS06730	0.40	+0.0
1,378,481	+		ABIE41_RS06730	0.40	-0.2
1,378,482	-		ABIE41_RS06730	0.40	-1.8
1,378,482	-		ABIE41_RS06730	0.40	+0.4
1,378,482	-		ABIE41_RS06730	0.40	-0.1
1,378,482	-		ABIE41_RS06730	0.40	-0.3
1,378,482	-		ABIE41_RS06730	0.40	-2.1
1,378,482	-		ABIE41_RS06730	0.40	-0.3
1,378,482	-		ABIE41_RS06730	0.40	+0.2
1,378,499	+		ABIE41_RS06730	0.42	+0.0
1,378,610	+		ABIE41_RS06730	0.53	+0.3
1,378,611	-		ABIE41_RS06730	0.53	-0.2
1,378,611	-		ABIE41_RS06730	0.53	-0.3
1,378,629	+		ABIE41_RS06730	0.54	-2.0
1,378,644	+		ABIE41_RS06730	0.56	-2.3
1,378,671	-		ABIE41_RS06730	0.59	+1.2
1,378,671	-		ABIE41_RS06730	0.59	+1.6
1,378,671	-		ABIE41_RS06730	0.59	+0.1
1,378,700	+		ABIE41_RS06730	0.61	-0.2
1,378,700	+		ABIE41_RS06730	0.61	+0.0
1,378,701	-		ABIE41_RS06730	0.61	+0.1
1,378,701	-		ABIE41_RS06730	0.61	-0.3
1,378,701	-		ABIE41_RS06730	0.61	+1.3
1,378,701	-		ABIE41_RS06730	0.61	-0.8
1,378,701	-		ABIE41_RS06730	0.61	+0.1
1,378,701	-		ABIE41_RS06730	0.61	-0.6
1,378,701	-		ABIE41_RS06730	0.61	-1.7
1,378,701	-		ABIE41_RS06730	0.61	+0.2
1,378,730	+		ABIE41_RS06730	0.64	+2.1
1,378,730	+		ABIE41_RS06730	0.64	-0.3
1,378,730	+		ABIE41_RS06730	0.64	-0.3
1,378,730	+		ABIE41_RS06730	0.64	-0.0
1,378,730	+		ABIE41_RS06730	0.64	-0.4
1,378,730	+		ABIE41_RS06730	0.64	-0.7
1,378,730	+		ABIE41_RS06730	0.64	-3.2
1,378,730	+		ABIE41_RS06730	0.64	+1.1
1,378,730	+		ABIE41_RS06730	0.64	-0.1
1,378,730	+		ABIE41_RS06730	0.64	+0.0
1,378,730	+		ABIE41_RS06730	0.64	+0.4
1,378,730	+		ABIE41_RS06730	0.64	-0.2
1,378,730	+		ABIE41_RS06730	0.64	+0.1
1,378,731	-		ABIE41_RS06730	0.64	+0.2
1,378,731	-		ABIE41_RS06730	0.64	-0.2
1,378,731	-		ABIE41_RS06730	0.64	+2.0
1,378,731	-		ABIE41_RS06730	0.64	-1.9
1,378,731	-		ABIE41_RS06730	0.64	+1.3
1,378,731	-		ABIE41_RS06730	0.64	-0.3
1,378,731	-		ABIE41_RS06730	0.64	+1.3
1,378,753	+		ABIE41_RS06730	0.66	-0.4
1,378,753	+		ABIE41_RS06730	0.66	-1.2
1,378,754	-		ABIE41_RS06730	0.67	-0.7
1,378,754	-		ABIE41_RS06730	0.67	-0.1
1,378,928	+		ABIE41_RS06730	0.83	+0.5
1,378,928	+		ABIE41_RS06730	0.83	-0.1
1,378,928	+		ABIE41_RS06730	0.83	-0.8
1,378,928	+		ABIE41_RS06730	0.83	-0.7
1,378,928	+		ABIE41_RS06730	0.83	+0.2
1,378,928	+		ABIE41_RS06730	0.83	-2.4
1,378,928	+		ABIE41_RS06730	0.83	+0.2
1,378,928	+		ABIE41_RS06730	0.83	+0.9
1,378,929	-		ABIE41_RS06730	0.84	+0.2
1,378,929	-		ABIE41_RS06730	0.84	+0.1
1,378,929	-		ABIE41_RS06730	0.84	-1.2
1,378,929	-		ABIE41_RS06730	0.84	-1.0
1,378,929	-		ABIE41_RS06730	0.84	-0.1
1,378,929	-		ABIE41_RS06730	0.84	+0.2
1,378,929	-		ABIE41_RS06730	0.84	-0.3
1,378,929	-		ABIE41_RS06730	0.84	-0.8
1,379,012	+				-1.8
1,379,012	+				+0.4
1,379,012	+				-0.3
1,379,012	+				-0.7
1,379,013	-				-0.4
1,379,013	-				-0.3
1,379,013	-				+0.2
1,379,013	-				-0.8
1,379,089	+				-0.2
1,379,089	+				-1.7
1,379,089	+				+0.9
1,379,089	+				-0.3
1,379,089	+				+0.8
1,379,090	-				+0.2
1,379,090	-				-0.3
1,379,132	+				+0.9
1,379,132	+				-1.5
1,379,132	+				-1.0
1,379,177	+				+0.0
1,379,177	+				-0.8
1,379,177	+				+0.3
1,379,177	+				+0.7
1,379,177	+				-1.5
1,379,177	+				+0.6
1,379,177	+				-0.5
1,379,178	-				+0.4
1,379,178	-				-0.8
1,379,178	-				-0.2
1,379,250	+				-0.1
1,379,250	+				+0.6
1,379,315	+				+2.0
1,379,328	+				+0.1
1,379,378	+				-0.9
1,379,378	+				-0.4
1,379,378	+				+0.2
1,379,378	+				+0.4
1,379,378	+				+0.3
1,379,378	+				+0.2
1,379,378	+				+0.8
1,379,378	+				+0.3
1,379,378	+				+1.3
1,379,378	+				-1.4
1,379,378	+				+0.7
1,379,379	-				+0.0
1,379,379	-				-0.9
1,379,379	-				+0.2
1,379,379	-				-0.3
1,379,379	-				-0.5
1,379,379	-				-0.2
1,379,437	-				+0.6
1,379,721	+				+1.2
1,379,817	+				+0.7
1,379,841	+				+0.5
1,379,841	+				+0.9
1,379,841	+				+2.6
1,379,841	+				+0.6
1,379,841	+				+0.2
1,379,842	-				-1.0
1,379,842	-				+0.1
1,379,842	-				-0.4
1,379,842	-				-1.5
1,379,842	-				-0.6
1,379,842	-				+0.1
1,379,842	-				-0.3
1,379,842	-				+1.5
1,379,905	+				-0.8
1,379,905	+				-0.8
1,379,905	+				-2.6
1,379,905	+				-1.0
1,379,905	+				+0.1
1,379,905	+				-1.4
1,379,967	+		ABIE41_RS06735	0.11	+0.8
1,379,967	+		ABIE41_RS06735	0.11	-0.3
1,379,967	+		ABIE41_RS06735	0.11	-0.8
1,379,968	-		ABIE41_RS06735	0.11	-0.0
1,379,968	-		ABIE41_RS06735	0.11	+0.2
1,379,968	-		ABIE41_RS06735	0.11	-0.2
1,379,972	+		ABIE41_RS06735	0.11	-0.7
1,379,972	+		ABIE41_RS06735	0.11	+0.9
1,379,972	+		ABIE41_RS06735	0.11	+0.2
1,379,972	+		ABIE41_RS06735	0.11	-1.9
1,379,973	-		ABIE41_RS06735	0.11	-2.0
1,379,973	-		ABIE41_RS06735	0.11	+0.6